Basic Information

Insect: Leptidea reali
Gene Symbol: -
Assembly: GCA_949711725.1
Location: CATIXN010000001.1:28605009-28613859[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 1.9e-05 0.0024 19.3 2.1 1 23 155 177 155 177 0.99

2 28 0.00046 0.058 15.0 0.3 3 20 224 241 222 243 0.92

3 28 8.7e-05 0.011 17.3 0.5 3 23 270 291 268 291 0.96

4 28 1.9 2.4e+02 3.6 0.3 2 21 312 331 311 332 0.86

5 28 0.31 38 6.1 0.8 1 23 342 364 342 364 0.95

6 28 0.55 68 5.3 0.8 2 23 382 403 381 403 0.96

7 28 0.001 0.13 13.9 3.8 2 23 469 491 469 491 0.97

8 28 7.2 9e+02 1.8 0.1 14 23 557 566 545 566 0.86

9 28 0.0061 0.76 11.4 6.2 1 23 577 599 577 599 0.98

10 28 0.071 8.9 8.1 1.8 2 23 611 632 610 632 0.96

11 28 0.0042 0.53 11.9 0.7 1 23 642 664 642 664 0.98

12 28 0.013 1.6 10.5 4.7 1 23 693 715 693 715 0.96

13 28 0.09 11 7.8 0.1 1 16 726 741 726 743 0.90

14 28 0.017 2.1 10.0 0.2 1 23 748 770 748 770 0.96

15 28 0.00011 0.013 17.0 0.3 2 23 790 812 789 812 0.97

16 28 1.1 1.4e+02 4.3 1.0 1 23 830 852 830 852 0.91

17 28 0.085 11 7.8 3.7 1 23 859 881 859 881 0.97

18 28 0.004 0.51 12.0 4.0 2 23 892 914 891 914 0.95

19 28 0.00036 0.044 15.3 0.7 2 23 937 958 936 958 0.95

20 28 6.2 7.8e+02 2.0 4.0 2 23 1001 1023 1000 1023 0.94

21 28 0.00053 0.066 14.8 0.3 2 23 1039 1060 1038 1060 0.96

22 28 0.1 13 7.6 2.6 5 23 1070 1088 1067 1088 0.94

23 28 0.0027 0.34 12.6 1.0 2 23 1099 1121 1098 1121 0.95

24 28 0.016 2 10.1 1.8 2 23 1138 1156 1138 1156 0.96

25 28 4.2 5.2e+02 2.5 3.9 2 21 1160 1179 1160 1180 0.92

26 28 0.39 48 5.8 1.0 2 23 1228 1249 1227 1249 0.93

27 28 0.025 3.1 9.5 0.5 2 23 1260 1282 1259 1282 0.94

28 28 0.29 36 6.2 3.3 2 20 1320 1338 1319 1340 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	1.9e-05	0.0024	19.3	2.1	1	23	155	177	155	177	0.99
2	28	0.00046	0.058	15.0	0.3	3	20	224	241	222	243	0.92
3	28	8.7e-05	0.011	17.3	0.5	3	23	270	291	268	291	0.96
4	28	1.9	2.4e+02	3.6	0.3	2	21	312	331	311	332	0.86
5	28	0.31	38	6.1	0.8	1	23	342	364	342	364	0.95
6	28	0.55	68	5.3	0.8	2	23	382	403	381	403	0.96
7	28	0.001	0.13	13.9	3.8	2	23	469	491	469	491	0.97
8	28	7.2	9e+02	1.8	0.1	14	23	557	566	545	566	0.86
9	28	0.0061	0.76	11.4	6.2	1	23	577	599	577	599	0.98
10	28	0.071	8.9	8.1	1.8	2	23	611	632	610	632	0.96
11	28	0.0042	0.53	11.9	0.7	1	23	642	664	642	664	0.98
12	28	0.013	1.6	10.5	4.7	1	23	693	715	693	715	0.96
13	28	0.09	11	7.8	0.1	1	16	726	741	726	743	0.90
14	28	0.017	2.1	10.0	0.2	1	23	748	770	748	770	0.96
15	28	0.00011	0.013	17.0	0.3	2	23	790	812	789	812	0.97
16	28	1.1	1.4e+02	4.3	1.0	1	23	830	852	830	852	0.91
17	28	0.085	11	7.8	3.7	1	23	859	881	859	881	0.97
18	28	0.004	0.51	12.0	4.0	2	23	892	914	891	914	0.95
19	28	0.00036	0.044	15.3	0.7	2	23	937	958	936	958	0.95
20	28	6.2	7.8e+02	2.0	4.0	2	23	1001	1023	1000	1023	0.94
21	28	0.00053	0.066	14.8	0.3	2	23	1039	1060	1038	1060	0.96
22	28	0.1	13	7.6	2.6	5	23	1070	1088	1067	1088	0.94
23	28	0.0027	0.34	12.6	1.0	2	23	1099	1121	1098	1121	0.95
24	28	0.016	2	10.1	1.8	2	23	1138	1156	1138	1156	0.96
25	28	4.2	5.2e+02	2.5	3.9	2	21	1160	1179	1160	1180	0.92
26	28	0.39	48	5.8	1.0	2	23	1228	1249	1227	1249	0.93
27	28	0.025	3.1	9.5	0.5	2	23	1260	1282	1259	1282	0.94
28	28	0.29	36	6.2	3.3	2	20	1320	1338	1319	1340	0.94

Sequence Information

Coding Sequence: ATGTGGAGGCTTGCCCCTATTATGTGGATACAAGACGGTGATGGATTACCAGACAAAATATGTTCTGAGTGTATTCAAAAGTTGAGCAGTGCTCACATATTCAAACAGCAATTTGAACGCTCTGATCAAGAACTCCGACGTAACTATGTCCCACCACCAGGCTTCACTTCTCCCTCGGAACAAAATAGACAAAGCAGTGATTCCGCGTTTTCAACACAAACAGATAGCTCAAAACCATCCTCGAGTCAAGTCACCCCCAGAACTAGAAAGAGAAGCTCAGAAAGTATTGATAATGCTTCGAGTAGCGGCGTATCTCATGACTATAATCCAAAGACCACGAAGCGTGTTGAAGAATTGCGGCAATCTCAAAAAAGAGCAAAACTTAAAACGAATTCTGATTCTGACTATGAATATAGCGGATCGGTTTATTCAGGGGGGACAGATTCAGATGAGCCTATAGAATACAAATGCGATATATGCTCGAAAGTTTTCAACAAATATCAAAGTTTAAATGCCCATAAGAAGACACATAAGCGTAGTAGTGATTCGGGTCTGTCGCCGCAGCCCTCGAGAAATTCTCTTACTGCCCCGTCCCCTATCCCCGTGTTGTCTACCTCACCTGATTATCTTGAGGCTAAAGATGCTAATTATTGTGAGGACAAAATTAATTGTGAAAAGTGTGGCAAGtcatttaagttaaaaattatgttgAAACGACACAAGGAAGTTTGTGGAAAACTTATTGACAAAGAGCTGAAAATATCACTTGAACCGATCGATTCAACGCCAAAACAAAATGCTATTGACTGCAAAATGTGCacaacaaaattcaaaacagTGGCTACTCTCGAAAAACACATGAGAGTCGTACATGCAGCAGTCCTTAAACGTGAATCCGATGTGAAAGTTTCGGCAGATGGTAAACCAATTGTGCCCTGTTTCTACTGTAATAAACCATATGATGATTATTATTCTCATACAGCACATTTCAGAGTTTGTCCAAAAAGGGATGATTCATTGTCCTTTACGTGTACTGTATGTGGTAAATATTTGCTCAAGAAAGCAAGTTATTATGTTCACATTAAAGAACATTTTCATCCTTCCAAAGACTTAAATCCATCTGCTGATTCTCCCCGAACTCTCAAATGTCGTTTCTGTAAAGCCAAGTTTGCATCACACGAATTGCTAATACCACATTTAGCTACACACATGGACGATGAAAATGATTTTGAAGATGTAGAATCTCGAAACAGTACTATAGAAGATTCAGGCACTAGAAACACATCAAATGTAAGCATTAAATCAGAACCTCCCAATTTAAAGGAATCTCCGGACCATTTGGGTGAGCCTTTGAATCATGAGCAATATGACAGTGATTCTAGTCAAGGCGACGATAATGATAACACTTGCGATATATGCGAACGACAATTCTCTTATAAACGTCTGCTGATTCATCACAAGCGTACAAAGCACAATATATCGTCGGGAACGAAAAGGGCAAAGATAACACTGAAGGATTGTTTGGTTCGGTGTCTTATTTGCGATCTGGAGATGAAAGCGGAGCCCCTGGAAATCCAGAGTCACAACGGCTTTCAAGAGGGATCCGCACCATCTGTTAACATGAGCGGCTTTACATGCCCCACGAGCTACAAACAAATGCCTACTCTTATTTCCCTTAAGAGACACATGAATTGGCACACCAATGTTGGAGGGAAAATTGAAAAACAGTACGAGTGTTTTGTCTGTAACgagATATTCCGATTCCAGTGCCACTATAAAATGCACATGCGTGAACATTACCATGACACAAATTTACACCCGAAGTATTTAACCTGTTCAATCTGCAACAGGAAGAGTAAACATCTTCGCGCTGCGCAAGCACACATGAACTTCCACAAACAAACTCGCTTCAAAAATAAAGATTATGAATGCTCAATATGCAAAAGAGTATTTCAATATAGAAAGGTTTACCTATCCCATATGGCCATTCATTACAAACGTGGTGAAAGTACAAACAATACTGTTGTTGGTTCTGTGTTACCTAACACAGCTGATATGACAGTATTCGACGGTACACATACTTGTCAATTGTGTGGAAAAGTTTGTCAGTCAGAGAATTCTCTCAAACATCACTTGATCTGGCACAAATCAAAGACTTCTCTTTACGGATCTAGATATGAGTGTGAGATATGCAATTTGCAGTTCACTAACAAGAAGCGTTTGGAAATTGACAATGGTCCATTTAAATGTAACATATGTGGTAAGGGTAACATTGCTGAGAGTTACTTAAGGAAGCATGTCAAGGGTCACAACTTTGATCACCAATCGCATAAAAAACGAATCGAAAAATTGAGGAAAGATAAAGTAAAATGCCCCATTTGTACCAAATTTTATCCGGACTTGGTGAAACTGATTCGGCACTTGCGAAGAACTCATCCTGAGAGCAAAACGATAAAAGAAGACCCAGATGCGCCGCAACAGCCATATTTTTCTTGTAAACTTTGTGCAAAAGTATTTTTGGACGAGCGAAGGCTACAACATCACGAAGAAGCCCATCTTCGCAAACCAGAATTCTTCAAGTGTAAATTCTGCGGCAAGAAAACGATTTCCTTGAAAAATCACAGAGTACATATTAAAGGACATCTCACACAGAAGTATATTGATGAGCCCCTTAAGTGTGCACATTGTGAGGAAACATTTACGAGAGGCTATGACTTACACCACCATTTACGAGATGTACACAATATTAATGAAACATGGATAGCAGACAGAAATAATGAACATTTAGATGGACCCTTGAAAGATCTTCAGTGTTCCATCTGTCATAAAGTGTTAGCCAGCCAAGGGAACTATGAGAGACATTTAGACTACCATAATTCTCTTCGCTGCAATTATTGTTATGATAACTTCAGTTCTTTAAGGTTTTTGGATGGTCATTTGGCATTTAGCTGTGATAAGAAAAAATTGATTGGGGATACTGAAATCTATCCccgaaaaataaaatgtaaaatgtgttACAAACCTTTCCATCTACAAGTTAAACTGGATTGTCATTTACGCACAGTGCACGGAGTTAAGTCTTTCAAACAGGCTTCATATAGAAAGAGAGAGATTGTGTGTGATTATTGTTTTAGAGTTTTCGAAAATGAAGATTCCTTAACAAGCCATAGACTTTATCACAGAACTATAGGGTATTATGGGTGCATTTATTGtcctaaaaaatttaatactctCACGGCATACAGAAAACACAAAAACCATCATTTTTCTCAACTTAATGTAGACAATCCTACAAAGTGCGAACATTGTGATGAAACCTTTGTTCCATTCAGGGAATTCATTTACCACATGAGAGATGTTCATCAGGATGATAAGGAATGGATTGTGATGCCAAAGGAGGCGATTGAAGAGAAGTGCAACATATGCAACAAAATATTCTATAATCTTCAAAGACACCTTATGTACCATGAGGAAAACAGATGCAAAAAGTGTGGGGAATACTTCTTTTCGCATATCGATTATGATAACCACATCTGCCATATTGACAGCGAAGATGAAGTCCAAGAAAACGACTATACCGACATACGACCTAAATACGAAGAgtgtaaattttgtttcaaacaACTCACATATAAAACTCAAAAAGTGCACGACATACTTCACAAGGGGTCAGGCTCTATATCCTGTCGCTTCTGTACTCTCAAATTTAAGACCATGGATGCTTTTAACATTCACGCCTTTTCTCACAGAAGCAGAAAGTACAAAAAGAGGCCTATAAAGTGTAGACTTTGCCCAGAGAAGTTTGTGAAATACGGACCTTTCATGCGACACATGAAATTCGTTCACAAGTCTACCAAAAAGGTTCATTACAGAGCCACTGTTAAACCGGAGAAGTGTGTGGTGTGTGGGGATCTGTTCCCCAATTTGCACAACCACTACAGGGCTCATTTACAGAATCAGTGTCAGCAAtgtcttaaatattttacttcatCGAAATTGTTCACAAAACATGAGTGCGACAAAGAGGACTCAGACCCTTCGAAAGTTTTTACTTGTGATGCGGATCTTATACACTTGATTAACACTTTCGTTCCCACGGACGAGAAAGATGACGAAAAGTTCTATGGTTATGATGAAGAGGATGATATTGACGAAGAACAAAACAATGAGCTTCCTGATAATGAAGACAGTCAAATCTCAGCAGACACAGCTGAGGATAAAATACATGAAATGGTTCACGCGCCTATCATTTCTGACGTATTATCGCTTTACAAAAGCAAAGATGTTgacaatttaaaacaaacaacaatGGGTGATCCAAATGTtatagatcttgtagatgatgATTCCATTGGTTTCGAAAGTGCTCCCATTCCAGTAATTACTATTGATTGTGATGATTCACAATGA
Protein Sequence: MWRLAPIMWIQDGDGLPDKICSECIQKLSSAHIFKQQFERSDQELRRNYVPPPGFTSPSEQNRQSSDSAFSTQTDSSKPSSSQVTPRTRKRSSESIDNASSSGVSHDYNPKTTKRVEELRQSQKRAKLKTNSDSDYEYSGSVYSGGTDSDEPIEYKCDICSKVFNKYQSLNAHKKTHKRSSDSGLSPQPSRNSLTAPSPIPVLSTSPDYLEAKDANYCEDKINCEKCGKSFKLKIMLKRHKEVCGKLIDKELKISLEPIDSTPKQNAIDCKMCTTKFKTVATLEKHMRVVHAAVLKRESDVKVSADGKPIVPCFYCNKPYDDYYSHTAHFRVCPKRDDSLSFTCTVCGKYLLKKASYYVHIKEHFHPSKDLNPSADSPRTLKCRFCKAKFASHELLIPHLATHMDDENDFEDVESRNSTIEDSGTRNTSNVSIKSEPPNLKESPDHLGEPLNHEQYDSDSSQGDDNDNTCDICERQFSYKRLLIHHKRTKHNISSGTKRAKITLKDCLVRCLICDLEMKAEPLEIQSHNGFQEGSAPSVNMSGFTCPTSYKQMPTLISLKRHMNWHTNVGGKIEKQYECFVCNEIFRFQCHYKMHMREHYHDTNLHPKYLTCSICNRKSKHLRAAQAHMNFHKQTRFKNKDYECSICKRVFQYRKVYLSHMAIHYKRGESTNNTVVGSVLPNTADMTVFDGTHTCQLCGKVCQSENSLKHHLIWHKSKTSLYGSRYECEICNLQFTNKKRLEIDNGPFKCNICGKGNIAESYLRKHVKGHNFDHQSHKKRIEKLRKDKVKCPICTKFYPDLVKLIRHLRRTHPESKTIKEDPDAPQQPYFSCKLCAKVFLDERRLQHHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYIDEPLKCAHCEETFTRGYDLHHHLRDVHNINETWIADRNNEHLDGPLKDLQCSICHKVLASQGNYERHLDYHNSLRCNYCYDNFSSLRFLDGHLAFSCDKKKLIGDTEIYPRKIKCKMCYKPFHLQVKLDCHLRTVHGVKSFKQASYRKREIVCDYCFRVFENEDSLTSHRLYHRTIGYYGCIYCPKKFNTLTAYRKHKNHHFSQLNVDNPTKCEHCDETFVPFREFIYHMRDVHQDDKEWIVMPKEAIEEKCNICNKIFYNLQRHLMYHEENRCKKCGEYFFSHIDYDNHICHIDSEDEVQENDYTDIRPKYEECKFCFKQLTYKTQKVHDILHKGSGSISCRFCTLKFKTMDAFNIHAFSHRSRKYKKRPIKCRLCPEKFVKYGPFMRHMKFVHKSTKKVHYRATVKPEKCVVCGDLFPNLHNHYRAHLQNQCQQCLKYFTSSKLFTKHECDKEDSDPSKVFTCDADLIHLINTFVPTDEKDDEKFYGYDEEDDIDEEQNNELPDNEDSQISADTAEDKIHEMVHAPIISDVLSLYKSKDVDNLKQTTMGDPNVIDLVDDDSIGFESAPIPVITIDCDDSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00875543;
90% Identity: iTF_00875543; iTF_00874681; iTF_00876415;
80% Identity: -