Basic Information

Insect: Leptidea juvernica
Gene Symbol: -
Assembly: GCA_949711685.1
Location: CATIXL010004290.1:30-9391[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 2.1e-05 0.0029 19.2 2.1 1 23 148 170 148 170 0.99

2 30 0.0005 0.07 14.9 0.3 3 20 217 234 215 236 0.92

3 30 9.5e-05 0.013 17.1 0.5 3 23 263 284 261 284 0.96

4 30 2.1 2.9e+02 3.5 0.3 2 21 305 324 304 325 0.86

5 30 0.33 47 6.0 0.8 1 23 335 357 335 357 0.95

6 30 0.24 33 6.5 0.2 2 23 375 396 374 396 0.96

7 30 2.7e-05 0.0038 18.9 0.8 2 23 434 456 433 456 0.96

8 30 0.0011 0.16 13.8 3.8 2 23 501 523 501 523 0.97

9 30 8.7e-05 0.012 17.3 1.8 1 23 573 596 573 596 0.98

10 30 0.0011 0.15 13.8 0.5 1 23 649 671 649 671 0.98

11 30 0.0066 0.93 11.3 6.2 1 23 682 704 682 704 0.98

12 30 0.077 11 8.0 1.8 2 23 716 737 715 737 0.96

13 30 0.0046 0.65 11.8 0.7 1 23 747 769 747 769 0.98

14 30 0.014 1.9 10.3 4.7 1 23 798 820 798 820 0.96

15 30 0.0035 0.48 12.2 0.7 1 23 831 853 831 853 0.94

16 30 0.00026 0.037 15.7 0.3 1 23 861 883 861 883 0.97

17 30 0.00011 0.016 16.9 0.3 2 23 903 925 902 925 0.97

18 30 1.2 1.7e+02 4.2 1.0 1 23 943 965 943 965 0.91

19 30 0.093 13 7.7 3.7 1 23 972 994 972 994 0.97

20 30 0.0044 0.62 11.9 4.0 2 23 1005 1027 1004 1027 0.95

21 30 0.00039 0.054 15.2 0.7 2 23 1050 1071 1049 1071 0.95

22 30 6.8 9.5e+02 1.9 4.0 2 23 1114 1136 1113 1136 0.94

23 30 0.0011 0.15 13.8 0.3 2 23 1152 1173 1151 1173 0.95

24 30 0.11 15 7.5 2.6 5 23 1183 1201 1180 1201 0.94

25 30 0.0029 0.41 12.4 1.0 2 23 1212 1234 1211 1234 0.95

26 30 0.018 2.5 10.0 1.8 2 23 1251 1269 1251 1269 0.96

27 30 4.5 6.4e+02 2.4 3.9 2 21 1273 1292 1273 1293 0.92

28 30 0.42 59 5.7 1.0 2 23 1341 1362 1340 1362 0.93

29 30 0.027 3.8 9.4 0.5 2 23 1373 1395 1372 1395 0.94

30 30 0.31 44 6.1 3.3 2 20 1433 1451 1432 1453 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	2.1e-05	0.0029	19.2	2.1	1	23	148	170	148	170	0.99
2	30	0.0005	0.07	14.9	0.3	3	20	217	234	215	236	0.92
3	30	9.5e-05	0.013	17.1	0.5	3	23	263	284	261	284	0.96
4	30	2.1	2.9e+02	3.5	0.3	2	21	305	324	304	325	0.86
5	30	0.33	47	6.0	0.8	1	23	335	357	335	357	0.95
6	30	0.24	33	6.5	0.2	2	23	375	396	374	396	0.96
7	30	2.7e-05	0.0038	18.9	0.8	2	23	434	456	433	456	0.96
8	30	0.0011	0.16	13.8	3.8	2	23	501	523	501	523	0.97
9	30	8.7e-05	0.012	17.3	1.8	1	23	573	596	573	596	0.98
10	30	0.0011	0.15	13.8	0.5	1	23	649	671	649	671	0.98
11	30	0.0066	0.93	11.3	6.2	1	23	682	704	682	704	0.98
12	30	0.077	11	8.0	1.8	2	23	716	737	715	737	0.96
13	30	0.0046	0.65	11.8	0.7	1	23	747	769	747	769	0.98
14	30	0.014	1.9	10.3	4.7	1	23	798	820	798	820	0.96
15	30	0.0035	0.48	12.2	0.7	1	23	831	853	831	853	0.94
16	30	0.00026	0.037	15.7	0.3	1	23	861	883	861	883	0.97
17	30	0.00011	0.016	16.9	0.3	2	23	903	925	902	925	0.97
18	30	1.2	1.7e+02	4.2	1.0	1	23	943	965	943	965	0.91
19	30	0.093	13	7.7	3.7	1	23	972	994	972	994	0.97
20	30	0.0044	0.62	11.9	4.0	2	23	1005	1027	1004	1027	0.95
21	30	0.00039	0.054	15.2	0.7	2	23	1050	1071	1049	1071	0.95
22	30	6.8	9.5e+02	1.9	4.0	2	23	1114	1136	1113	1136	0.94
23	30	0.0011	0.15	13.8	0.3	2	23	1152	1173	1151	1173	0.95
24	30	0.11	15	7.5	2.6	5	23	1183	1201	1180	1201	0.94
25	30	0.0029	0.41	12.4	1.0	2	23	1212	1234	1211	1234	0.95
26	30	0.018	2.5	10.0	1.8	2	23	1251	1269	1251	1269	0.96
27	30	4.5	6.4e+02	2.4	3.9	2	21	1273	1292	1273	1293	0.92
28	30	0.42	59	5.7	1.0	2	23	1341	1362	1340	1362	0.93
29	30	0.027	3.8	9.4	0.5	2	23	1373	1395	1372	1395	0.94
30	30	0.31	44	6.1	3.3	2	20	1433	1451	1432	1453	0.94

Sequence Information

Coding Sequence: ATACAAGACGGTGATGGATTACCAGACAAAATATGTTCTGAGTGTATTCAAAAGTTGAGCAGTGCTCACATATTCAAACAGCAATGTGAACGCTCTGATCAAGAACTCCGACGTAACTATGTCCCACCACCAGGCTTCACTTCTCCCTCGGAACAAAATAGACAAAGCAGTGATTCCGCGTTTTCAACACAAACAGATAGCTCAAAACCATCCTCGAGTCAAGTCACCCCTATAAGCAGAACTAGAAAGAGAAGCTCAGAAAGTATTGATAATGCTTCGAGTAGCGGCGTATCTCATGACTATAATCCAAAGACCACGAAGCGTGTTGAAGAATTGCGGCAATCTCAAAAAAGAGCTAAACTTAAAACTAATTCTGATTCTGACTATGAATATAGCGGATCAGTTTATTCAGGGGGGACAGATTCAGATGAGCCTATAGAATACAAATGCGATATATGCTCGAAAGTTTTCAACAAATATCAAAGTTTAAATGCCCATAAGAAGACACATAAACGTAGTAGTGATTCGGGTATGTCGCCGCAGCCCTCGAGAAATTCTCTTACTGCCCCTTCCCCTATCCCCGTGTTGTCTACCTCACCTGATTATCTTGAGGCCAAAGATGCTAATGATTGTGAGGACAAAATTAATTGTGAAAAGTGTGGCAAGtcatttaagttaaaaattatgttgaaaCGACACAAGGAAGTCTGTGGAAAACTTATTGACAAAGAGCTGAAAATATCACTTGAACCGATCGATTCAATGCCAAAACAAAATGCTATTGACTGCAAAATGTGCacaacaaaattcaaaacaGTGGCTACTCTCGAAAAACACATGAGAGTCGTACATGCAGCAGTCCTTAAACATGAATCCGATGTGAAAGTTTCGGCAGATGGTAAACCAATTGTGCCCTGTTTCTACTGTAATAAACCATATGATGATTATTATTCTCATACAGCACATTTCAGAGTTTGTCCAAAAAGGGATGATTCATTGTCCTTTACGTGTACTGTATGTGGTAAATATTTGCTCAAGAAAGCAAGTTATTATGTTCACATTAAAGAACATTTTCATCCTTCCAAAGACTTAAATCCATCTGCTGATTCTCCCCGAACTCTCAAATGTCGTTTCTGTAAAGCCAAGTTGGCATCACAGGAATTGCTAATATCACATTTAGCTTCACACATGGACGATGAAAATGATTTTGAAGATGTAGAATCTCGAAACAGTACTATAGAAGATTCAGGGTCTGTACATTCAGATTACAATAATTCAAAGGTCTCTACAGGACCTCTAAAATGTCCCTATTGTGATGCTCGTTTCAAATATAAGAAAGCACTAGAAACACATCAAATCACCAAACATTCTGTAGACCCAAAAAATGTAAGCATTAAATCAGAACCTCCCGATTTAAAGGAATCTCCGGACCATTTGGGTGAACCTTTGAATGATGAGCAATATGACAGTGATTCTAGTCAAGGCGACGATAATGATAACACTTGCGATATATGCGAACGACAATTCTCTTATAAACGTCTGCTGATTCATCACAAGCGTACAAAACACAATATATCGTCGGGAACGAAAAGGGCAAAGATAACACTGAAGGATTGTTTGGTTCGGTGTCTTATTTGCGATCTGGAGATGAAAGTGAGCGCTATCAATGAGCACAACCAAAAACACATTAGGGCCAACATAAAGCCTCGTAATTTGTATACGTGTACAGAATGTAAGCAACAGTTCAAGAGCTGCAGCGGCCTTGctaatcatattaaaatagtgCATAGGTTACAACTTAAGCCGCAAGCGCCGCAAGCTAGCGATGCAACACCGGATTTGGCGGATTTTTGTGAAGTCGTTGTGACAAAGGCGGAGCCCCTGGAAATCCAGAGTCACAACGGCTTTCAAGAGGGATCCGCACCATCTGTCAACATGAGCGGCTTTACATGCCCCACGTGCAACAAACAAATGCCTACTCTTATTTCCCTTAAGAGACACATGAATTGGCACACCAATGTTGGAGGGAAAATTGAAAAACAGTACGAGTGTTTTGTCTGTAACGagATATTCCGATTCCAGTGCCACTATAAAATGCACATGCGTGAACATTACCATGACACAAATTTAGACCCGAAGTATTTGACCTGTTCAATCTGCAACAGGAAGAGTAAACATCTTCGCGCTGCGCAAGCACACATGAACTTCCACAAACAAACTCGCTTCAAAAATAAAGATTATGAATGCTCAATATGCAAAAGAGTATTTCAATATAGAAAGGTTTACCTATCCCATATGGCCATTCATTACAAACGTGGTGAAAGTACAAACAATACTGTTGTCGGTTCTGTGTTACCTAACACAGCTGATATGACAGTATTCGACGGTACACATACTTGTCAATTGTGTGGAAAAGTTTGTCAGTCAGAGAATTCTCTCAAACATCACTTGATCTGGCACAAATCAAAGACTTCTCTTTACGGATCTAGATATGAGTGTGAGATATGCAATTTGCAGTTCACTAACAAGAAGCGTTTGGAGATTCATGATAGATCACACTATGAAGATGACAATGGTCCATTTAAATGTAACATATGTGGCAAGGGTTACATTGCTGAGACTTACTTAAGGAAGCATGTCAAGGGTCACAACTTTGATCACCAATCCCATAAAAAACGAATCGAAAAATTGAGGAAAGATAAAGTAAAATGCCCCATTTGTACCAAATTTTATCCGGACTTGGTGAAACTGATTCGGCACTTGCGAAGAACTCATCCTGAGAGCAAAATGATAAAAGAAGACCCAGATGCGCCGCAACAGCCATATTTTTCTTGTAAACTTTGTGCAAAAGTCTTTTTGGACGAGCGAAGGCTACAACATCACGAAGAAGCCCATCTTCGCAAACCAGAATTCTTTAAGTGTAAATTCTGCGGCAAGAAAACGATTTCCTTGAAAAATCACAGAGTACATATTAAAGGACATCTCACACAGAAGTATATTGATGAGCCCCTTAAGTGTGCACATTGTGAGGAAACATTTACGAGAGGCTATGACTTACACCACCATTTACGAGATGTACACAATATTAATGAAACATGGATAGCAGACAGAAATAATGAACATTTAGATGGACCCTTGAAAGATCTTCAGTGTTCCATCTGTCATAAAGTGTTAGCCAGCCAAGGGAACTATGAGAGACATTTAGACTACCATAATTCTCTTCGCTGCAATTATTGTTATGATAACTTCAGTTCTTTAAGGTTTTTGGATGGGCATTTGGCATTTAGCTGTGATAAGAAAAAATTGATTGGGGATACTGAAATCTATCCccgaaaaataaaatgtaaaatgtgttACAAACCTTTCCATCTACAAGTTAAACTGGATTGTCATTTACGCACAGTGCACGGAATTAAGTCTTTCAAACAGGCTTCATATAGAAAGAGAGAGATTGTATGTGATTATTGTTTTAGAGTTTTCGAAAATGAAGATTCCTTAACAAGCCATAAACTTTATCACAGAACTATAGGGTATTATGGGTGCATTTATTGtcctaaaaaatttaatactctCACGGCATACAGAAAACACAAAAACCATCATTTTGCTCAACTTAATGTAGACAATCCTACAAAGTGCGAACATTGTGACGAAACCTTTGTTCCATTCAGGGAATTCATTTACCACATGAGAGATGTTCATCAGGATGATAAGGAATGGATTGTGATGCCAAAGGAGGTGATTGAAGAGAAGTGCAACATATGCAACAAAATATTCTATAATCTTCAAAGACACCTTATGTACCATGAGGAAAACAGATGCAAAAAGTGTGGGGAATACTTCTTTTCGCATATCGATTATGATAACCACATCTGCCATATTGACAGCGAAGATGAAGTCCAAGAAAACGACGATACCGACATACGACCTAAATACGAAGAGTGTAGATTTTGTTTCAAACAACTCACATATAAAACTCAAAAAGTGCACGACACACTTCACAAGGGGTCAGGCTCTATATCCTGTCGCTTCTGTACTCTCAAATTTAAGACCATGGATGCTTTTAACATTCACGCCTTTTCTCACAGAAGCAGAAAGTACAAAAAGAGGCCTATAAAGTGTAGACTTTGCCCAGAGAAGTTTGTGAAATACGGACCTTTTATGCGACACATGAAATTCGTTCACAAGTCTACCAAAAAGGTTCATTACAGAGCCACTGTTAAACCGGAGAAGTGTGTGGTGTGTGGGGATCTGTTCCCCAATTTGCACAACCACTACAGGGCTCATTTACAGAATCAGTGTCAGCAAtgtcttaaatattttacttcatCGAAATTGTTCACAAAACATGAGTGCGACAAAGAGGACTCAGACCCTTCGAAAGTTTTTACTTGTGATGCGGATCTTATACACTTGATTAACACTTTCGTTCCCACGGACGAGAAAGATGACGAAAAGTTCTACGGTTATGATGAAGAGGATGATATTGACGAAGAACAAAACAATGAGCTTCCTGATAATGAAGACAGTCAAAACTCAGCAGACACAGCTGAGGATAAAATACATGAAATGGTTCACGCGCCTATCATTTCAGACGTATTATCGCTTTACAAAAGCAAAGATGTTgacaatttaaaacaaacaacaatGGGTGATCCAAATGTtatagatcttgtagatgatgATTCCATTGGTTTCGAAAGTGCTCCCATTCCAGTAATTACTATTGATTGTGATGATTCACAATGA
Protein Sequence: IQDGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYVPPPGFTSPSEQNRQSSDSAFSTQTDSSKPSSSQVTPISRTRKRSSESIDNASSSGVSHDYNPKTTKRVEELRQSQKRAKLKTNSDSDYEYSGSVYSGGTDSDEPIEYKCDICSKVFNKYQSLNAHKKTHKRSSDSGMSPQPSRNSLTAPSPIPVLSTSPDYLEAKDANDCEDKINCEKCGKSFKLKIMLKRHKEVCGKLIDKELKISLEPIDSMPKQNAIDCKMCTTKFKTVATLEKHMRVVHAAVLKHESDVKVSADGKPIVPCFYCNKPYDDYYSHTAHFRVCPKRDDSLSFTCTVCGKYLLKKASYYVHIKEHFHPSKDLNPSADSPRTLKCRFCKAKLASQELLISHLASHMDDENDFEDVESRNSTIEDSGSVHSDYNNSKVSTGPLKCPYCDARFKYKKALETHQITKHSVDPKNVSIKSEPPDLKESPDHLGEPLNDEQYDSDSSQGDDNDNTCDICERQFSYKRLLIHHKRTKHNISSGTKRAKITLKDCLVRCLICDLEMKVSAINEHNQKHIRANIKPRNLYTCTECKQQFKSCSGLANHIKIVHRLQLKPQAPQASDATPDLADFCEVVVTKAEPLEIQSHNGFQEGSAPSVNMSGFTCPTCNKQMPTLISLKRHMNWHTNVGGKIEKQYECFVCNEIFRFQCHYKMHMREHYHDTNLDPKYLTCSICNRKSKHLRAAQAHMNFHKQTRFKNKDYECSICKRVFQYRKVYLSHMAIHYKRGESTNNTVVGSVLPNTADMTVFDGTHTCQLCGKVCQSENSLKHHLIWHKSKTSLYGSRYECEICNLQFTNKKRLEIHDRSHYEDDNGPFKCNICGKGYIAETYLRKHVKGHNFDHQSHKKRIEKLRKDKVKCPICTKFYPDLVKLIRHLRRTHPESKMIKEDPDAPQQPYFSCKLCAKVFLDERRLQHHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYIDEPLKCAHCEETFTRGYDLHHHLRDVHNINETWIADRNNEHLDGPLKDLQCSICHKVLASQGNYERHLDYHNSLRCNYCYDNFSSLRFLDGHLAFSCDKKKLIGDTEIYPRKIKCKMCYKPFHLQVKLDCHLRTVHGIKSFKQASYRKREIVCDYCFRVFENEDSLTSHKLYHRTIGYYGCIYCPKKFNTLTAYRKHKNHHFAQLNVDNPTKCEHCDETFVPFREFIYHMRDVHQDDKEWIVMPKEVIEEKCNICNKIFYNLQRHLMYHEENRCKKCGEYFFSHIDYDNHICHIDSEDEVQENDDTDIRPKYEECRFCFKQLTYKTQKVHDTLHKGSGSISCRFCTLKFKTMDAFNIHAFSHRSRKYKKRPIKCRLCPEKFVKYGPFMRHMKFVHKSTKKVHYRATVKPEKCVVCGDLFPNLHNHYRAHLQNQCQQCLKYFTSSKLFTKHECDKEDSDPSKVFTCDADLIHLINTFVPTDEKDDEKFYGYDEEDDIDEEQNNELPDNEDSQNSADTAEDKIHEMVHAPIISDVLSLYKSKDVDNLKQTTMGDPNVIDLVDDDSIGFESAPIPVITIDCDDSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00875543;
90% Identity: iTF_00875566;
80% Identity: -