Lspi002198.2
Basic Information
- Insect
- Leistus spinibarbis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_933228875.1
- Location
- CAKOGB010000035.1:775591-781000[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.64 7.7e+03 -3.7 0.5 263 278 45 60 29 78 0.42 2 3 1.2e-111 1.5e-107 359.8 28.9 1 300 95 410 95 410 0.93 3 3 0.028 3.4e+02 0.7 4.6 121 172 409 460 408 470 0.87
Sequence Information
- Coding Sequence
- ATGAGTGATTTGTCAAATATGGGTGGTGTTACAAGTGATACAAGTAATAAAAACGATGTAATAACTATCGATGGTGTAACCAGCGATGAGTTTAATGATTCCTGTGAAGAATTGGATGATTCAGGGCATCAAGATGCGGATTCAACACAATCAGATTTAGATGAAATCGACTTGGAATCGCATTCGAAACGTAGACGAACCAATGCGAATGTAATGCAAAGTGATAACACGGAACCGGAAGCAGAATGCATCAACGATTTCCTCGATAAATGTACAGACGGTGCGGAAGCAAGGTTGGCAGCCCGAAGGCAAGCTCGGGCAGAAGCGCGGGAAATTCGGATGCGAGAACTGGAGCGTCAACAGCGCGAACAAGAAGAAAATGCAGACCGCGCCTATGATATGTTAGCTGAACCATTGGCACGGACTCCTCGTGCTAGTGCCATCAGCAGTATCGGAAGTACCCGGACTCCTACAGCTGTGGGGCTCAATAATAGCGCATACCTCTCCAGCCGTCGGAGCTCGGAGGACTCCCTCGAAGATGGCGGCAGTATCCGGGACGTTCGGCTCGAGCTTAAAGAGCTGGAGGACAAATTCCGTAAAGCAATGATCGCAAATGCTCAACTAGACAATGACAAAGCGTCCCAAACGTACCAACTCGAATTACTGAAAGATCGAATAGAAGAATTAGAAGAAGAACACACGCAACTGAAGCGAGAACATCGGGAAACGTGTCGGGAACACGAGCAATTAAAACGAGTCGCTGTCCGCTTAAAAGAAGATTTAACGTGTTACAAAAGCGAACTAGAAGAACGGGATCGGTTAATAGCTGAAAAAGGTTTGGTCATTGTTGGGGAAGAGATACCCGATGATGAATTGAACGACACTAGCGACCCAACCATCGTGCGGACTCCAAAGAAAGCTTTAGTTAGTATAGAAAATGCCGAGTTGCTTGAGAACGCTGGGGAAGGGAGTTTAGATGTACGGTTGAAACGTTTCGCTGAGGAAAAACGGGATCTAATGGATCAGTTAAGTCATATTAGATTAGAATTGGAGGAAGAACGAAGCAGACGGAAACGTAGAACGAGTTCTATAACTGCAAATGCTTCGCTGCAAAACGGCCCAAGCTTAGAATTCGACACTGTGGACGTCATAGATGTACAACGAGAAGCCAATAAACAGTTGGCCGACTACAAATTCAGGTTGCAAAAGTCCGATCAAGATATCGCTACTTTACAGGCGACTGTCGCTCGCCTGGAGAGCCAAGTGATTCGGTATAAATCGTCGGCGGAAGCGTCTGAAAAAGCGGAGGACGAACTGAAAGTGGAGAAAAGAAAACTGCAACGCGAATCCCGAGAATCACAAAGTAGAGTCGAAGAATTGGAAACGGCAAATAATCACCTATTAAAACGGCTTGATAAGTTAAAAAATGCCAAATCGGCGCTACTAAAAGAACTCTGA
- Protein Sequence
- MSDLSNMGGVTSDTSNKNDVITIDGVTSDEFNDSCEELDDSGHQDADSTQSDLDEIDLESHSKRRRTNANVMQSDNTEPEAECINDFLDKCTDGAEARLAARRQARAEAREIRMRELERQQREQEENADRAYDMLAEPLARTPRASAISSIGSTRTPTAVGLNNSAYLSSRRSSEDSLEDGGSIRDVRLELKELEDKFRKAMIANAQLDNDKASQTYQLELLKDRIEELEEEHTQLKREHRETCREHEQLKRVAVRLKEDLTCYKSELEERDRLIAEKGLVIVGEEIPDDELNDTSDPTIVRTPKKALVSIENAELLENAGEGSLDVRLKRFAEEKRDLMDQLSHIRLELEEERSRRKRRTSSITANASLQNGPSLEFDTVDVIDVQREANKQLADYKFRLQKSDQDIATLQATVARLESQVIRYKSSAEASEKAEDELKVEKRKLQRESRESQSRVEELETANNHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01225682;
- 90% Identity
- iTF_01039232;
- 80% Identity
- -