Basic Information

Insect: Laothoe populi
Gene Symbol: -
Assembly: GCA_905220505.1
Location: HG992150.1:3801722-3815377[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 2.2e-06 0.00021 22.5 1.6 1 23 191 213 191 213 0.99

2 31 0.018 1.7 10.2 0.4 1 23 301 323 301 323 0.98

3 31 0.00036 0.034 15.6 0.6 2 21 350 369 349 370 0.93

4 31 2.1e-05 0.002 19.4 0.2 2 23 456 478 455 478 0.96

5 31 1.9 1.8e+02 3.9 0.7 1 23 525 548 525 548 0.95

6 31 0.094 8.8 8.0 0.2 2 23 565 586 564 586 0.94

7 31 0.0022 0.21 13.1 1.1 2 20 614 632 613 634 0.92

8 31 0.0011 0.1 14.0 2.7 2 23 661 683 661 683 0.97

9 31 0.059 5.6 8.6 0.1 1 23 733 756 733 756 0.96

10 31 0.8 76 5.0 0.2 1 17 815 831 815 835 0.80

11 31 0.00018 0.017 16.5 3.1 1 23 848 870 848 870 0.99

12 31 0.094 8.9 8.0 0.4 2 23 882 903 881 903 0.94

13 31 0.01 0.97 11.0 1.7 1 23 913 935 913 935 0.98

14 31 0.0009 0.085 14.3 2.3 1 23 959 981 959 981 0.96

15 31 8.2e-05 0.0077 17.6 3.2 1 23 992 1014 992 1014 0.98

16 31 3.9e-05 0.0037 18.6 4.5 1 23 1022 1044 1022 1044 0.99

17 31 0.0019 0.18 13.3 0.2 2 23 1064 1086 1063 1086 0.97

18 31 1.9 1.8e+02 3.9 0.2 1 20 1104 1123 1104 1126 0.82

19 31 0.3 28 6.4 2.5 1 23 1133 1155 1133 1155 0.95

20 31 0.0079 0.74 11.3 3.3 2 23 1166 1188 1165 1188 0.95

21 31 0.00086 0.081 14.4 1.1 2 23 1211 1232 1210 1232 0.95

22 31 4 3.7e+02 2.8 1.1 2 20 1236 1254 1235 1256 0.91

23 31 0.011 1.1 10.8 0.2 2 23 1313 1334 1312 1334 0.95

24 31 0.025 2.4 9.7 1.9 3 23 1342 1362 1340 1362 0.96

25 31 0.033 3.1 9.4 1.0 2 23 1373 1395 1372 1395 0.94

26 31 1.3 1.3e+02 4.3 4.2 2 23 1412 1430 1412 1430 0.90

27 31 1.3 1.2e+02 4.3 2.1 2 19 1475 1492 1475 1496 0.87

28 31 1.2 1.2e+02 4.4 0.4 2 23 1503 1524 1502 1524 0.95

29 31 0.0013 0.13 13.8 0.5 2 23 1535 1557 1534 1557 0.97

30 31 8.4 8e+02 1.8 0.2 12 22 1557 1567 1555 1567 0.90

31 31 0.91 86 4.9 4.4 2 20 1595 1613 1594 1615 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	2.2e-06	0.00021	22.5	1.6	1	23	191	213	191	213	0.99
2	31	0.018	1.7	10.2	0.4	1	23	301	323	301	323	0.98
3	31	0.00036	0.034	15.6	0.6	2	21	350	369	349	370	0.93
4	31	2.1e-05	0.002	19.4	0.2	2	23	456	478	455	478	0.96
5	31	1.9	1.8e+02	3.9	0.7	1	23	525	548	525	548	0.95
6	31	0.094	8.8	8.0	0.2	2	23	565	586	564	586	0.94
7	31	0.0022	0.21	13.1	1.1	2	20	614	632	613	634	0.92
8	31	0.0011	0.1	14.0	2.7	2	23	661	683	661	683	0.97
9	31	0.059	5.6	8.6	0.1	1	23	733	756	733	756	0.96
10	31	0.8	76	5.0	0.2	1	17	815	831	815	835	0.80
11	31	0.00018	0.017	16.5	3.1	1	23	848	870	848	870	0.99
12	31	0.094	8.9	8.0	0.4	2	23	882	903	881	903	0.94
13	31	0.01	0.97	11.0	1.7	1	23	913	935	913	935	0.98
14	31	0.0009	0.085	14.3	2.3	1	23	959	981	959	981	0.96
15	31	8.2e-05	0.0077	17.6	3.2	1	23	992	1014	992	1014	0.98
16	31	3.9e-05	0.0037	18.6	4.5	1	23	1022	1044	1022	1044	0.99
17	31	0.0019	0.18	13.3	0.2	2	23	1064	1086	1063	1086	0.97
18	31	1.9	1.8e+02	3.9	0.2	1	20	1104	1123	1104	1126	0.82
19	31	0.3	28	6.4	2.5	1	23	1133	1155	1133	1155	0.95
20	31	0.0079	0.74	11.3	3.3	2	23	1166	1188	1165	1188	0.95
21	31	0.00086	0.081	14.4	1.1	2	23	1211	1232	1210	1232	0.95
22	31	4	3.7e+02	2.8	1.1	2	20	1236	1254	1235	1256	0.91
23	31	0.011	1.1	10.8	0.2	2	23	1313	1334	1312	1334	0.95
24	31	0.025	2.4	9.7	1.9	3	23	1342	1362	1340	1362	0.96
25	31	0.033	3.1	9.4	1.0	2	23	1373	1395	1372	1395	0.94
26	31	1.3	1.3e+02	4.3	4.2	2	23	1412	1430	1412	1430	0.90
27	31	1.3	1.2e+02	4.3	2.1	2	19	1475	1492	1475	1496	0.87
28	31	1.2	1.2e+02	4.4	0.4	2	23	1503	1524	1502	1524	0.95
29	31	0.0013	0.13	13.8	0.5	2	23	1535	1557	1534	1557	0.97
30	31	8.4	8e+02	1.8	0.2	12	22	1557	1567	1555	1567	0.90
31	31	0.91	86	4.9	4.4	2	20	1595	1613	1594	1615	0.93

Sequence Information

Coding Sequence: ATGGCACTTGAACTCGGTAAATGCAGACTATGTCTCAAATTGGGAGATTTCTACTCCATTTTCACTGTGGACAATGGAGTCCAACTGGCCGAGATGGTTATGGAATGCTCGAGGGTGAAAatatatgAAGGCGATGGACTACCAGAAAAAGTGTGCTCAGAATGCATACAGAAACTTAGCGGCGCGTATATTTTCAAACAACAGTGCGAGAGAGCCGACCAGGATCTGCGTCGCAACTATGTTCCGCCCCCAGGTTTCGGACTATCACCGAACCGTCAGAGCAGCGACTCTGCCTTCTCCACTCATACAGAATATTCCAACGTGAACAAATCCATATCCACCGAGGGCAAAGTGACACCAGCAAGTTCGGACCGCAAACGCAGGATAGAGAACGATAATACCCACGATAGCCGTCATGACTACCGTAAAGACACCAAGCGTGATAGCCTTACCAGGACCAGCAAGAAACCAAAGTACCTCAACACGTCTATGGACTCCGACGACGACAACGCTGGCAGTCTAACAGCAGAGAGTGTCTGCACAGAGTCTAACGAACCAACAAAGAGCGAGTTCAAATGCACCAAATGCCCCAAAGAGTTTAATAGCAAATACGGCCTGAACAACCATCTAAGAATTCACAAGGATAGATTAGACGGTAATGTGACACCCGCAAGTACGCCGCGAGGACACAGCATCGAAAGTGACAATGCTTCGTCAAGCAGCAGGCAAGATTACCCCAGCAGCACGAAACGTGTAAACGAACTCAGGAGGTTGGGCAAAGGAAAGAGGAATCTGAAGACAAATTCATCAATGGATTCAGATGATGATGACAACGGCGATTCTAGTTTCAAAAGTGAAACTGCCGGCACTGATTCCGACGACTCAACCCCGAAGACCATGTTCAAATGTAAACTTTGTCCCAACGAGTATGCGGCATATCAAGCTTTAAACTCGCATATGCGGTACCACAAACGGGAAAGTATGAAGGAAGAGACGCCAGACGTTCCAACACCACCCCTCGCAGAAATACTTGACGAAGATAACCTCAGTTGTAACAAATGTGGTAAAAGTTACAAGTTGAAGATAATGTTGAAACGTCACCAGCAAATCTGCAAGCAGACACCACAAAAGCCGCCGACGCCACAGACACAGCAACCGCCACAAAAGCAGCAACTTCAACCAAAGCAAGAACAATCGCAGAAGCAGCAGGCACCTCAAAAGCAGCAACCACCTCCAAAACAGCAAGCAGCCCAAAAGCAGCAAACACCGCAACAGCCGCAGAAGTTAGAAACGCCACCGACATCGCCTAAGAAAGAGTTGCTCGTATGTCTCGAGCCAGTGGATGGCAGGCACAACGTCAAGGTGGAGTGTGACATCTGCACCGCCAAGTTCAAGACTTTGGACAATCTTAACAAACATCTGAGGGTAGTTCATGCCGCAGCGCCTAAGAGGATGTCGCGAACTGCTGGCAGTGTATCTGTCACGTGCATTTACTGTGCCGAGTCTTTCGACGATTATTATATCCACAACGCTCATTTCAGCACATGCCCGAAAAAAGACGCCCGGGAGACATTCAAATGCCCTCTCTGCCTGGTAGTTTCTTTCAAGAAGGTGGCCTACTTCTCCCATATAAAGAACACCCACTTCGAACCAGAGACTCGGTCTCAAACGGATCCTAAAGAGGAGGAACTTAAGTGCCGGTTCTGTAACAAGATACTTGCGACTCAACAGTTGCTCGTCACTCATCTAGCGGCGCATATGTCTAACATTGACGAGTCTGTCGACGATACCAGAACCGCACCAATTACATCCACACCAGAATCGTCAAAGGGTATACTAAACTGCACTCATTGCAATAAAGAGTTCAAATACAAGCGTTCGTTGGCAAACCACGAGATATCATGCACGATGCGTGGCAAAGAACTGGAGAACAATGATGAAGGAAACGATGCAGATTCCAGCCAGGACGAAGATGATAACACATGTGACATATGCGAGAAGCAGTTCTCATACAAAGCGCTGTTAGTCCACCATAAGAAAACCAAGCACACCATGTGTGCCGGAGTGAAACGAGCCAGTATCACTCTGAAGGACTGTGCGGTGAAGTGCATGATATGCGACATAGACATGAAGGTGAAGGACATACAGGCTCACAATAAAGGGCACATATCTATGAACATGAAGCCGCGGAACATCTACACGTGTGCCGCTTGTGGtgattttttcaaaaacttaACCGCTCTTGCTACTCACATCAAGTATGTGCACAGATTAAACATGGAAACACCAAACGAAAGAAAATACCAAAGCCTTGACCCGGCTGCGTTCTGCGAGGTGGTGGTGGCGAAGACAGAGCCTCAGGAGTGGCCGCAGGGCGAGGACTTCAGCTCGACGCCTGATGGAGTGGTGAAGATCGAGGGGCCCCCGCCCGAGCCTGGTGCCTTCGTGTGCCCCACCTGTGGGAAGACGATGCCGTCCGCCATCTCCTTGAAGTGTCACTTGGCCTGCCACGCGAAGTACGACCGCGTGGTTGGCGGGAAGTACGAATGCTTCGTTTGTAAGGAGGTATTCAAGTTCCAAGTGCACTACAAGCTGCACATGCGCGTGCACTACAGCGACACCAACCTGGACCCGAAGCTGCTCACCTGTTCCATCTGCAACCGCAAGAGCAAGAACCTCAGGGCGGCCCGCGCACACATGGCCTTCCACAAACAAACACGCTTCCAGATCAAAGACTACCAATGCTCTATGTGTAAAAGAATATTCCAAAACAGGAAAGTTTACCTCTCCCACATGTCGATACATTACAAACGGGGGGATAGTGCTGGATCTGGATTACCGAAGGATGTTGATAAAAGTATGTTCGATGGTTCACACACTTGCGAGTTGTGCGGGAAAGTGTGCATCTCTGAAGTGTCGCTCAAACATCATATTATATGGCACAAGTCGAAGGGTTCCCTGTATGGCGCCCGGCACGAGTGCACCATCTGTAACATGCAGTTCACGAACAAAAGGACGCTCACTCTTCATGTACGCACGCACTATGAGAATGAGAACGGACCGTTCAAATGCCACCTCTGCAACAAGGGCTTCACCGATGAGGACTATTACAGGCGACATCTGAAGTCGCACAACTTCGACCACTCCTCCCACAAGAAGCGGATAGAGGGACTACGGAAAGATAAGGTCAAGTGTCCGATCTGCTCGCGGTATTATCCGGATTTAGTGAAACTCATTCGGCATTTGAAACGGACGCATCCGGAGAGCAAAATGATCAAAGCAGACCCAGACGCGCCGCCGCAACGATACTATCCTTGCCAGCTGTGTGCCAAAGTGTTTATAGACGAACGAAGACTACAGTTCCATAAAGAGGCTCATCTGAGAAAGCCAGTGTTTTATAAGTGTAAGTTCTGCGGTAAGAACACCATCTCATTGAGATCTCATAATGTTCACATTAAGGCCCATTTGGCCGCGAAGCATATTGACGAACCTCTGAAGTGTCCTCATTGTCCAGAAACCTTTGTGAAGGGGTATGGCTTGCACCACCATCTGCGGGATACGCATGGAATTAACGAGACTTGGATTGCTGAACGAACCAGCAAGGGTCTCGATGGACCACTCAAAGACCTTCAATGTTCCGTCTGCCATAAAATATTAGCGAGTAAAGGTAACTTCCAGCGGCATATCGACTACCACAATTCGTTGAGATGCAATTACTGCTTCGAATACTTTGGCACGCACAGATTCCTCGAAGGTCATTTGTCTTTTATGTGTGAAAAAAAGAAATTAGTTGGCGACACAGAAGTGTACCCTAAAAGAGTGAAGTGTCACATTTGTTACAAAGCATTCCATTTGCAAGTGAAACTGGACTGTCACTTGCGGACGCAGCATGGCATCGCCGTGACTAAGGAGGCATCAGCAGGCAAGAAGGAGATTGTTTGTGACTACTGCTTCAAAGTTTTTGAGAACGATTATGCGTTGAGTACGCACAAGATTTACCACAGGACTATCGGTTACTATGGTTGCAGATACTGCCCAAAGAAATTCGGTACGTTGACGCTATATAGGAAACACAAAACTAGTCACTTGTATGTGTTAAACGTCGACAACCCGACGAAGTGCGATCATTGTGACGAACGGTTTGTGGCGTTCAGGGATATGATCAGCCATATGAAGGACGAGCATGGGGATGACAGCGAGTGGATTATCATGCCCAAAGACTCTATCGAGGAGACGTGCAGCATTTGCAACAAAACCTTCTTCAActtgcacaaacatttgtcgtacCACGAGGAgaataaatgtaaaaagtgCGGCGAATATTTCTTATCCGTCATCGACTTTGACAACCACCTCTGCACTATAGAGAGTGATGATGAAGAAAACACTTATTGTAATGGTGGAGTCAATTCCAAATATGAGGAATGTAACTTCTGCTTCAAGCCCTTCACCAGCACCAGTTCAAAGCTGAAACACGATAAAATACACAAGGGCTCCGGGTCGATATCGTGCCGTTTCTGCGCTCTCAAATTTAAAACTATCGATGCATTCAATATACACGCATTTACCCACCGAAGTAGCAAATATACCAAGAGGCCAATAAAATGTCGCCAGTGCGGCGAGAAGTTCGTCAAATACGGACCTTTTATAAAACACATGCGGTCTGTGCATAAATCGAATTTAAAGATACATTATCGAACAACAGTAAAGCCTGAGACATGCGTTGTATGCGGCGACGACTTCCCCAACTTGCATAACCACTATCGAGCACACCTTCTAAACCAGTGTCATCAGTGCCGGAAATATTTTACCTCGTACAAACTATTCACTATGCACGAATGTGAAAAAGAGGACAGCGATCCGTCGAAAGTGTTCACTTCTGATGCAGACTTGACAGCTCTCATAAACGCTTATGTGCCAAAAGACGAGAAGAATGATGAGAAATTGTACGGAGACAACGATGAGGATGACATTCCAGTGGAAAGTAATGACGCAGGAGAAAATAATGCAGGAGTGACCAATGACGATGCAGGGGAAAATGAGGCTAATGATGATACAGAAGAATACTCTCAAGATGAGGAGCCTGAAGTAAAGAAGTTCGATACATTCCAGTCCCCTGTCATATCTGATGTCCTATCTTTGTACAAGAAGGAGGAGGTGGCCAGCCAGTGCAGTGAGAACAGTCAAACGGGAGATAAAGATGTGTTTATCATCAGCAGTGATGAAGAATCCGCAGACATGGATGGCCGAGAGTCACCCATTGTTGTGGTTGATGACTAG
Protein Sequence: MALELGKCRLCLKLGDFYSIFTVDNGVQLAEMVMECSRVKIYEGDGLPEKVCSECIQKLSGAYIFKQQCERADQDLRRNYVPPPGFGLSPNRQSSDSAFSTHTEYSNVNKSISTEGKVTPASSDRKRRIENDNTHDSRHDYRKDTKRDSLTRTSKKPKYLNTSMDSDDDNAGSLTAESVCTESNEPTKSEFKCTKCPKEFNSKYGLNNHLRIHKDRLDGNVTPASTPRGHSIESDNASSSSRQDYPSSTKRVNELRRLGKGKRNLKTNSSMDSDDDDNGDSSFKSETAGTDSDDSTPKTMFKCKLCPNEYAAYQALNSHMRYHKRESMKEETPDVPTPPLAEILDEDNLSCNKCGKSYKLKIMLKRHQQICKQTPQKPPTPQTQQPPQKQQLQPKQEQSQKQQAPQKQQPPPKQQAAQKQQTPQQPQKLETPPTSPKKELLVCLEPVDGRHNVKVECDICTAKFKTLDNLNKHLRVVHAAAPKRMSRTAGSVSVTCIYCAESFDDYYIHNAHFSTCPKKDARETFKCPLCLVVSFKKVAYFSHIKNTHFEPETRSQTDPKEEELKCRFCNKILATQQLLVTHLAAHMSNIDESVDDTRTAPITSTPESSKGILNCTHCNKEFKYKRSLANHEISCTMRGKELENNDEGNDADSSQDEDDNTCDICEKQFSYKALLVHHKKTKHTMCAGVKRASITLKDCAVKCMICDIDMKVKDIQAHNKGHISMNMKPRNIYTCAACGDFFKNLTALATHIKYVHRLNMETPNERKYQSLDPAAFCEVVVAKTEPQEWPQGEDFSSTPDGVVKIEGPPPEPGAFVCPTCGKTMPSAISLKCHLACHAKYDRVVGGKYECFVCKEVFKFQVHYKLHMRVHYSDTNLDPKLLTCSICNRKSKNLRAARAHMAFHKQTRFQIKDYQCSMCKRIFQNRKVYLSHMSIHYKRGDSAGSGLPKDVDKSMFDGSHTCELCGKVCISEVSLKHHIIWHKSKGSLYGARHECTICNMQFTNKRTLTLHVRTHYENENGPFKCHLCNKGFTDEDYYRRHLKSHNFDHSSHKKRIEGLRKDKVKCPICSRYYPDLVKLIRHLKRTHPESKMIKADPDAPPQRYYPCQLCAKVFIDERRLQFHKEAHLRKPVFYKCKFCGKNTISLRSHNVHIKAHLAAKHIDEPLKCPHCPETFVKGYGLHHHLRDTHGINETWIAERTSKGLDGPLKDLQCSVCHKILASKGNFQRHIDYHNSLRCNYCFEYFGTHRFLEGHLSFMCEKKKLVGDTEVYPKRVKCHICYKAFHLQVKLDCHLRTQHGIAVTKEASAGKKEIVCDYCFKVFENDYALSTHKIYHRTIGYYGCRYCPKKFGTLTLYRKHKTSHLYVLNVDNPTKCDHCDERFVAFRDMISHMKDEHGDDSEWIIMPKDSIEETCSICNKTFFNLHKHLSYHEENKCKKCGEYFLSVIDFDNHLCTIESDDEENTYCNGGVNSKYEECNFCFKPFTSTSSKLKHDKIHKGSGSISCRFCALKFKTIDAFNIHAFTHRSSKYTKRPIKCRQCGEKFVKYGPFIKHMRSVHKSNLKIHYRTTVKPETCVVCGDDFPNLHNHYRAHLLNQCHQCRKYFTSYKLFTMHECEKEDSDPSKVFTSDADLTALINAYVPKDEKNDEKLYGDNDEDDIPVESNDAGENNAGVTNDDAGENEANDDTEEYSQDEEPEVKKFDTFQSPVISDVLSLYKKEEVASQCSENSQTGDKDVFIISSDEESADMDGRESPIVVVDD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01359082; iTF_01010607; iTF_00063802; iTF_00859710; iTF_00341536;
90% Identity: -
80% Identity: -