Basic Information

Insect: Amorpha juglandis
Gene Symbol: -
Assembly: GCA_949126905.1
Location: OX421368.1:2974004-2984471[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 6.2e-05 0.0039 18.0 4.9 1 23 197 219 197 219 0.99

2 30 0.0052 0.33 11.9 1.1 1 23 307 329 307 329 0.98

3 30 0.0026 0.16 12.9 0.4 2 21 356 375 355 376 0.93

4 30 2.2e-05 0.0014 19.4 0.2 2 23 457 479 456 479 0.96

5 30 1.1 70 4.6 0.4 1 23 527 550 527 550 0.96

6 30 0.047 3 8.9 0.2 2 23 566 587 565 587 0.94

7 30 0.1 6.4 7.9 1.0 5 20 619 634 616 636 0.88

8 30 0.00055 0.034 15.0 3.0 2 23 667 689 667 689 0.97

9 30 0.00013 0.0084 16.9 0.1 1 23 739 762 739 762 0.95

10 30 1.8 1.1e+02 3.9 2.3 1 20 822 841 822 844 0.89

11 30 0.0004 0.025 15.4 3.0 1 23 855 877 855 877 0.98

12 30 0.25 16 6.6 0.4 2 23 889 910 888 910 0.94

13 30 0.011 0.72 10.9 1.2 1 23 920 942 920 942 0.98

14 30 0.002 0.12 13.3 1.2 2 23 971 992 971 992 0.96

15 30 8.3e-05 0.0053 17.6 3.2 1 23 1003 1025 1003 1025 0.98

16 30 7e-05 0.0044 17.8 3.4 1 23 1033 1055 1033 1055 0.99

17 30 0.0019 0.12 13.3 0.2 2 23 1075 1097 1074 1097 0.97

18 30 1.9 1.2e+02 3.8 0.2 1 20 1115 1134 1115 1137 0.82

19 30 4 2.5e+02 2.8 1.1 1 23 1144 1166 1144 1166 0.76

20 30 0.66 42 5.3 3.6 2 23 1177 1199 1176 1199 0.95

21 30 0.00088 0.055 14.4 1.1 2 23 1222 1243 1221 1243 0.95

22 30 0.63 40 5.4 1.5 2 20 1247 1265 1246 1267 0.92

23 30 0.0011 0.068 14.1 0.2 2 23 1324 1345 1323 1345 0.95

24 30 0.092 5.8 8.0 2.7 3 23 1353 1373 1351 1373 0.96

25 30 0.034 2.1 9.4 1.0 2 23 1384 1406 1383 1406 0.94

26 30 2 1.2e+02 3.8 3.8 2 23 1423 1441 1423 1441 0.89

27 30 0.91 57 4.9 0.9 2 20 1445 1463 1444 1465 0.90

28 30 0.33 21 6.2 0.7 2 23 1514 1535 1513 1535 0.95

29 30 0.0017 0.11 13.4 0.4 2 23 1546 1568 1545 1568 0.96

30 30 1.1 69 4.6 3.0 2 20 1606 1624 1605 1626 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	6.2e-05	0.0039	18.0	4.9	1	23	197	219	197	219	0.99
2	30	0.0052	0.33	11.9	1.1	1	23	307	329	307	329	0.98
3	30	0.0026	0.16	12.9	0.4	2	21	356	375	355	376	0.93
4	30	2.2e-05	0.0014	19.4	0.2	2	23	457	479	456	479	0.96
5	30	1.1	70	4.6	0.4	1	23	527	550	527	550	0.96
6	30	0.047	3	8.9	0.2	2	23	566	587	565	587	0.94
7	30	0.1	6.4	7.9	1.0	5	20	619	634	616	636	0.88
8	30	0.00055	0.034	15.0	3.0	2	23	667	689	667	689	0.97
9	30	0.00013	0.0084	16.9	0.1	1	23	739	762	739	762	0.95
10	30	1.8	1.1e+02	3.9	2.3	1	20	822	841	822	844	0.89
11	30	0.0004	0.025	15.4	3.0	1	23	855	877	855	877	0.98
12	30	0.25	16	6.6	0.4	2	23	889	910	888	910	0.94
13	30	0.011	0.72	10.9	1.2	1	23	920	942	920	942	0.98
14	30	0.002	0.12	13.3	1.2	2	23	971	992	971	992	0.96
15	30	8.3e-05	0.0053	17.6	3.2	1	23	1003	1025	1003	1025	0.98
16	30	7e-05	0.0044	17.8	3.4	1	23	1033	1055	1033	1055	0.99
17	30	0.0019	0.12	13.3	0.2	2	23	1075	1097	1074	1097	0.97
18	30	1.9	1.2e+02	3.8	0.2	1	20	1115	1134	1115	1137	0.82
19	30	4	2.5e+02	2.8	1.1	1	23	1144	1166	1144	1166	0.76
20	30	0.66	42	5.3	3.6	2	23	1177	1199	1176	1199	0.95
21	30	0.00088	0.055	14.4	1.1	2	23	1222	1243	1221	1243	0.95
22	30	0.63	40	5.4	1.5	2	20	1247	1265	1246	1267	0.92
23	30	0.0011	0.068	14.1	0.2	2	23	1324	1345	1323	1345	0.95
24	30	0.092	5.8	8.0	2.7	3	23	1353	1373	1351	1373	0.96
25	30	0.034	2.1	9.4	1.0	2	23	1384	1406	1383	1406	0.94
26	30	2	1.2e+02	3.8	3.8	2	23	1423	1441	1423	1441	0.89
27	30	0.91	57	4.9	0.9	2	20	1445	1463	1444	1465	0.90
28	30	0.33	21	6.2	0.7	2	23	1514	1535	1513	1535	0.95
29	30	0.0017	0.11	13.4	0.4	2	23	1546	1568	1545	1568	0.96
30	30	1.1	69	4.6	3.0	2	20	1606	1624	1605	1626	0.93

Sequence Information

Coding Sequence: ATGGCACTTGAACTCGGGAAATGCAGATTATGCCTCAAATTGGGCGATTTCTACTCCATCTTCACAGTGGACAATGGAGTCCAGCTGGCGGAGATGGTTATGGAATGCTCGCGGGTGAAAATATATGAAGGTGATGGGTTACCGGAAAAGGTGTGCTCAGAATGCATACAGAAACTCAGCAGTGCATATATTTTCAAACAACAGTGCGAAAGAGCCGACCAGGATTTGCGTCGCAACTATGTACCACCACCAGGTTTCGGATTATCACCAAACCGTCAGAGCAGCGACTCCGCCTTCTCCACTCACACGGAATATTCCAACGTGAACAAATCCATATCCACCGAGGGAAAAGTGACGCCAGCAAGTTCTGACCGCAAGCGGAGGACAGAAAGCAATAATACTAACGATGACCGCCATGACTACCACACCGACATCAAGCGCGATAAGCGCGAGAGCCTCACCAGGCCCACCAGGCTCAGCAAGAAACCAAAATACCTCAATAACTCCATGGATTCGGACGACGACAACGCCGGCAGTCTGACAGCCGAGAGTGTCTGCACAGAGTCCAATGAGCCCACGAAAAGCGAGTTCAAATGCACCAAATGCCACAAACAATTTAATAACGTATATGGGCTGAACAACCATCTGAGAACCCACCGACTGGATAGATTGGAAGGGACAGTGACATCGGCCAGTACGCCGCGAGGACGCAGCATCGAAAGTGACAATGCTTCATCAAGCAGCAGACAAGACTACCCCAGTAGCACTAAACGTGTCACCGAGCTCAGGAGGTTGGGCAAAGCCAAGCGGAACGTCAAGAATTCATCAATAGATTCTGACGACGATGACAACGGCGATTCGAGTTTCAAAAGCGAAACCGCCGGCACGGATTCTGATGACTCAACACCCAAAAGCATGTACAAATGTAAACTTTGCCCCAACGAGTACACGGGATATCGGGCTCTGAACTCGCACATGAGATTCCACAAACGTGAAAGTTTAAAGGAAGAGACGCCGGAAATTTCGATACCGATCGCGCCGGAAGAACCGGACGACGACAACCTGAGTTGTGTAAAATGCGGTAAGACTTACAAGTTGAAGATAATGCTGAAACGTCACCAGCAGTTGTGCAAGCAGACGCCACAGAAGCAGTTAACGCCAAATAAGCAGCCGACACCGCAGAAGCAGCAAGCACCAACGAAACAGCAAGCACTTCAGAAACAGCAACCACCACAGAAGCAACAAGCAGCACAAAAGCAAACACCAGTGAAACAAACACCGTTGAAGCTAGAAACGCCACCTGGATCGCCTAAGAAAGAGCTGCTCGTATGTCTCGAGCCAGTGGACGGCAAGCACAACGTGAAGGTGGAGTGTGATATCTGCACCGCCAAGTTCAAGACTTTAGACAACCTTAATAAGCATCTGAGGGTAGTTCATGCGGCAGCGCCTAAGAGGAGTCTAACGCGAGCCGCCGGCAGCGTCTCCGTGACCTGTATTTACTGTCGCGAGTCTTTCGACGATTATTATGTCCACAACGCTCACTTCAGCACGTGCCCGAAGAAAGACACTCGGGAGACGTTCAAGTGTCCTCTCTGCCTTGTAGTCTCGTTTAAGAAGGTGGCGTATTTCGCACATATAAAGAACACTCACTTTGAGCCGGAGACTAGACAAGTGGACCCTAAAGAGGAGGAACTCAAGTGCAGGTTCTGCAATAAAGTACTCGCGTCCCAACAGTTGCTGGTCACCCATCTCGCCGCGCACATGTCTAACATCGACGAGTCTGCCAGCGAAGATACCAGAGCCGTACCCAATACATCCACACCAGAGACGTCGAAAAGCACTTCAAACTGCATCCACTGCAACAAAGAGTTTAAGTACAAACGTTCGTTGATAAACCATGAGTTGTCATGCTCGATGCGGGACAAAGAAACGGTGAAGAAGGACGATGATGTGGAGAACGAGGCGGAGTCGAGTCAGGACGACGAAGCAGATGACAACACGTGCGACATCTGTGAGAAACAGTTCTCCTACAAAGCGTTGCTGTTACACCACAAGCGGACCAAGCACACGATGTGCGCGGGTGTAAAGCGAGCAAGTATCACACTAAAAAACTGTCCGGTGAAGTGCATGATATGCGACATAGACATGCAGGTGAAGGACATACATGCGCACAACAAGGAGCACATATCGATGAACATGAAGCCTCGCAACATATACACGTGCGGCGCTTGCGGTGAATCCTTCAAGAACTTGAGCGCACTCGCCACGCACATCAAGTTTGTGCACAGGTTGAACAAGGAAACCCCAAACGAAAGAAAATACCGAAGCATAGACCCGGCGGCTTTCTGCGAGGTCGTGGTGGCAAAGACAGAGCCCCAGGAGTGGCCGCAGGGTGTCGACTTCAGCTCAGTGCCTGATGGCGTGGTGAAGATCGAAGGGCAGCCGGACGCTGAGCCCACTGCGTTCGTGTGCCCCACGTGTGGGAAGAAGATGCCCTCGGCCAATTCCCTGAGGTGTCACATGGCCTGCCATGTGAGGTATGCCGCTGGCGATGGCAGGAAGTTCGAATGCTTCGTCTGCAAGGAGGCATTCAGGTTCCAAGTTCACTACAAGATGCACATGCGCATCCACTACAACGATACAAACCTGGACCCGAAGCTGCTTACCTGCTCCATCTGTAGTCGCAAGAGCAAGAACCTACGAGCCGCCCGCGCCCACATGGCCTTCCACAACCAGACGCGCTTCCAGAACAAAGACTACCAGTGCTCATTGTGTAAAAGAGTATTCCAGAATCGAAAAGTGTATCTCTACCATATGGCCATACATCAAAAGCGAGGGGATAGTGCACAGTCAGTTACAGGTCTTGGTCTAGGAAAGGATATTGATAAAAACATGTTTGATGGTACAAATACTTGTGAGCTGTGCGGGAAGGTTTGCGATTCAGAAGTGTCGCTCAAGCACCACATTATATGGCACAAGTCGAAAGGTTCCTTATACAGTGCAAGACACGAGTGCACCATCTGTAACATGCAGTTCACAAATAAAAGAACCCTCACTCTCCATGTACGAACGCATTATGAGAATGATAACGGACCATACAAATGCCACCTCTGCGAGAAGGGCTTCACCGACGAAGATTATTACCGTAGACATGTGAAGTCGCACAATTTCGATCATTCCTCGCATAAAAAACGGATAGAGAGACTACGGAAAGATCAAGTTAAGTGTCCTATCTGCTCACGGTATTACCCAGATTTGGTGAAGCTCATTCGACATTTGAAACGAACACATCCAGAGAGCAAAATGATTAAAGCGGATCCGGACGCGCCGCCACAACGATACTATCCTTGCCAATTGTGTGCTAAAGTGTTTATAGACGAACGAAGGCTACAGTTTCACAAGGAGGCTCATCTCAGGAAGCCAGTGTTTTATAAGTGTAAGTTTTGCGGTAGGAATGCGATGTCATTGAAAGCTCATAATATTCACATAAAAGCTCATCTGGCCGCGAAACATATTGACGAACCTCTGAAGTGTCCGCATTGTACAGACACCTTTGTGAAAGGATATGGCCTTCACCATCATCTGAGAGATGTGCACGGCATTAACGAGACTTGGATTGCCGAAAGAACCAATCAGGGTCTTGATGGACCTCTCAAAGACCTCCAGTGTTCCGTCTGCCACAAAATATTAGCGAGTAAAGGAAACTTCCAGCGTCATATCGACTACCACAACTCGTTGAGATGCAATTACTGCTTCGAATACTTCAGCACGCACAGATTCCTCGAAGGACATTTGTCTTTTATGTGCGAAAAGAAGAAATTAGTAGGCGACACGGAAGTGTTCCCCAAGCGAGTGAAGTGTCATATTTGTTACAAAGCTTTTCATTTACAAGTGAAACTGGACTGTCACTTGCGGACGCAGCACGGCATCTCGGTTACTAAAGAGGCCTCGGCCGGCAAGAAGGAGATCGTGTGCGACTACTGTTTCAAAGTGTTCGAGAACGAATACGCGTTGACTACGCACAAGATTTATCACAGAACCATCGGCTACTACGGCTGTAGGTACTGCTCGAAGAAGTTCGGCACGTTGACGCTTTATAGGAAACACAAAACTAGTCATCTATATGGGTTAAACGTCGACAACCCGACGAAATGCGACCATTGTGACGAAAGGTTCGTCGCGTTCAGAGATATGATCAGTCATATGAAAGACGAGCATGGCGACGATAGCGAATGGATTATCATGCCGAAAGACTCCATCGAGGAAACATGCGGCATTTGTAACAAAACCTTCTTCAAtttgcacaaacatttgtcgtaCCACGAGgagaataaatgtaaaaaatgcgGCGAATATTTCTACTCCGTGATCGACTTTGATAACCACCTCTGTGCTATAGAGAGCGACGACGAAGAGAACGGTGATTCTATCAATGGAAACGGTTCCAAATACGAGGAATGCAACTTCTGCTTCAAGCCTATCACCACGACCAATTCTAAGCTCAAACACGATAAAATACACAGAGGATCCGGATCGATATCTTGTCGTTTCTGTTCGCTTAAATTTAAAACCATCGATGCATTCAACATACACGCGTTTACCCACCGAAGTAGCAAATACAATAAGAGGCCGATAAGATGTCGCCAGTGCGGCGAGAAGTTCGTGAAATACGGACCTTTTATAAAGCACATGCGGTCCGTGCATAAGTCGGCGTTGAAAATACATTATCGTGCCACGGTGAAGCCCGAGCGGTGTGTGGTGTGCGGCGACGATTTCCCAAACTTGCACAATCATTATCGAGCGCATCTCTTAAATCAGTGTCAACAGTGTCGAAAATATTTCACATCGTACAAATTATTCACAATGCACGAATGCGACAAGGAGGACGGTGATCCGTCTCAAGTGTTCACTTGCGACCAAGATCTGGTAGCTCTCATAAACGCTTACGTGCCAAAAGACGAGAAGAATGGTGAGAAATTGTACGGAGATAGCGGTGATGAGGATGATGATAGTCGAGTAGTCAACAATGACGTTTCAACGGCAAATAATGATAATGCAAAAGAATATAATGGCGAAGTAGATGAAAATGAGGCGAACGACGATACTGAAGAATTCTCTCAAGATGAAGAGCCTGATGTAAAGAATTTTGGAACGTTCCAGTCCCCAGTCATATCGGATGTCCTGTCTCTGTACAAGAAGGAGGAGGTGGCCAGCCAGTGTAGTGAGAACAACAGTCAGACGGGAGATAAAGACGTATTTGTAATCAGTAGCGATGATGAGTCATTGGATGTGGAAAACCACGGTTCCCCGATAGTTGTGGTTGATGACTGA
Protein Sequence: MALELGKCRLCLKLGDFYSIFTVDNGVQLAEMVMECSRVKIYEGDGLPEKVCSECIQKLSSAYIFKQQCERADQDLRRNYVPPPGFGLSPNRQSSDSAFSTHTEYSNVNKSISTEGKVTPASSDRKRRTESNNTNDDRHDYHTDIKRDKRESLTRPTRLSKKPKYLNNSMDSDDDNAGSLTAESVCTESNEPTKSEFKCTKCHKQFNNVYGLNNHLRTHRLDRLEGTVTSASTPRGRSIESDNASSSSRQDYPSSTKRVTELRRLGKAKRNVKNSSIDSDDDDNGDSSFKSETAGTDSDDSTPKSMYKCKLCPNEYTGYRALNSHMRFHKRESLKEETPEISIPIAPEEPDDDNLSCVKCGKTYKLKIMLKRHQQLCKQTPQKQLTPNKQPTPQKQQAPTKQQALQKQQPPQKQQAAQKQTPVKQTPLKLETPPGSPKKELLVCLEPVDGKHNVKVECDICTAKFKTLDNLNKHLRVVHAAAPKRSLTRAAGSVSVTCIYCRESFDDYYVHNAHFSTCPKKDTRETFKCPLCLVVSFKKVAYFAHIKNTHFEPETRQVDPKEEELKCRFCNKVLASQQLLVTHLAAHMSNIDESASEDTRAVPNTSTPETSKSTSNCIHCNKEFKYKRSLINHELSCSMRDKETVKKDDDVENEAESSQDDEADDNTCDICEKQFSYKALLLHHKRTKHTMCAGVKRASITLKNCPVKCMICDIDMQVKDIHAHNKEHISMNMKPRNIYTCGACGESFKNLSALATHIKFVHRLNKETPNERKYRSIDPAAFCEVVVAKTEPQEWPQGVDFSSVPDGVVKIEGQPDAEPTAFVCPTCGKKMPSANSLRCHMACHVRYAAGDGRKFECFVCKEAFRFQVHYKMHMRIHYNDTNLDPKLLTCSICSRKSKNLRAARAHMAFHNQTRFQNKDYQCSLCKRVFQNRKVYLYHMAIHQKRGDSAQSVTGLGLGKDIDKNMFDGTNTCELCGKVCDSEVSLKHHIIWHKSKGSLYSARHECTICNMQFTNKRTLTLHVRTHYENDNGPYKCHLCEKGFTDEDYYRRHVKSHNFDHSSHKKRIERLRKDQVKCPICSRYYPDLVKLIRHLKRTHPESKMIKADPDAPPQRYYPCQLCAKVFIDERRLQFHKEAHLRKPVFYKCKFCGRNAMSLKAHNIHIKAHLAAKHIDEPLKCPHCTDTFVKGYGLHHHLRDVHGINETWIAERTNQGLDGPLKDLQCSVCHKILASKGNFQRHIDYHNSLRCNYCFEYFSTHRFLEGHLSFMCEKKKLVGDTEVFPKRVKCHICYKAFHLQVKLDCHLRTQHGISVTKEASAGKKEIVCDYCFKVFENEYALTTHKIYHRTIGYYGCRYCSKKFGTLTLYRKHKTSHLYGLNVDNPTKCDHCDERFVAFRDMISHMKDEHGDDSEWIIMPKDSIEETCGICNKTFFNLHKHLSYHEENKCKKCGEYFYSVIDFDNHLCAIESDDEENGDSINGNGSKYEECNFCFKPITTTNSKLKHDKIHRGSGSISCRFCSLKFKTIDAFNIHAFTHRSSKYNKRPIRCRQCGEKFVKYGPFIKHMRSVHKSALKIHYRATVKPERCVVCGDDFPNLHNHYRAHLLNQCQQCRKYFTSYKLFTMHECDKEDGDPSQVFTCDQDLVALINAYVPKDEKNGEKLYGDSGDEDDDSRVVNNDVSTANNDNAKEYNGEVDENEANDDTEEFSQDEEPDVKNFGTFQSPVISDVLSLYKKEEVASQCSENNSQTGDKDVFVISSDDESLDVENHGSPIVVVDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00858785;
90% Identity: iTF_01010607;
80% Identity: -