Spin014231.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sphinx pinastri
Gene Symbol
-
Assembly
GCA_947568825.1
Location
OX387615.1:17743186-17751595[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 2.2e-05 0.0018 19.3 1.9 1 23 192 214 192 214 0.99
2 29 0.0039 0.32 12.1 3.9 1 23 303 325 303 325 0.98
3 29 0.026 2.2 9.5 0.4 3 21 356 374 354 375 0.89
4 29 8.7e-05 0.0072 17.3 0.3 2 23 451 473 450 473 0.96
5 29 3.8 3.1e+02 2.8 0.5 1 23 521 544 521 544 0.94
6 29 0.059 4.9 8.4 0.3 2 23 561 582 560 582 0.94
7 29 0.017 1.4 10.2 1.4 2 20 614 632 613 634 0.91
8 29 0.00048 0.039 15.0 3.0 2 23 664 686 664 686 0.97
9 29 2.5e-05 0.0021 19.0 0.2 1 23 736 759 736 759 0.96
10 29 1.3 1.1e+02 4.2 2.4 1 20 818 837 818 840 0.90
11 29 0.17 14 7.0 4.8 2 23 852 873 851 873 0.97
12 29 0.083 6.8 8.0 0.4 2 23 885 906 884 906 0.94
13 29 0.0065 0.53 11.5 1.9 1 23 916 938 916 938 0.98
14 29 0.00091 0.075 14.1 0.9 2 23 964 985 963 985 0.95
15 29 2.4e-05 0.002 19.1 4.9 1 23 996 1018 996 1018 0.98
16 29 3.9e-05 0.0032 18.4 3.8 1 23 1026 1048 1026 1048 0.99
17 29 0.0016 0.14 13.3 0.2 2 23 1068 1090 1067 1090 0.97
18 29 4.3 3.5e+02 2.6 0.3 1 19 1108 1126 1108 1130 0.80
19 29 0.36 30 6.0 3.6 1 23 1137 1159 1137 1159 0.96
20 29 0.015 1.2 10.3 3.4 2 23 1170 1192 1169 1192 0.95
21 29 0.00076 0.063 14.4 1.1 2 23 1215 1236 1214 1236 0.95
22 29 0.61 50 5.2 0.7 2 20 1240 1258 1239 1260 0.92
23 29 0.0026 0.21 12.7 0.2 2 23 1317 1338 1316 1338 0.95
24 29 0.0031 0.25 12.5 2.6 3 23 1346 1366 1344 1366 0.97
25 29 0.027 2.2 9.5 1.1 2 23 1377 1399 1376 1399 0.95
26 29 1.6 1.3e+02 3.9 4.2 2 23 1416 1434 1416 1434 0.90
27 29 1.1 89 4.5 1.1 2 20 1438 1456 1437 1458 0.91
28 29 0.44 36 5.7 0.9 2 23 1507 1528 1506 1528 0.95
29 29 0.002 0.17 13.1 0.4 2 23 1539 1561 1538 1561 0.96

Sequence Information

Coding Sequence
ATGGCTCTTGAACTCGGGAAATGCAGACTATGCCTCAAATTGGGCGATTTCTACTCCATCTTCACGGTGGACAATGGGGTCCAACTGGCAGAGATGGTTATGGAATGCTCTCGGGTGAAGATATACGAAGGGGACGGACTACCGGAAAAAGTGTGCTCAGAATGCATACAGAAACTCAGTGGCGCGTATATTTTCAAACAGCAATGCGAGAGAGCAGACCAAGATCTGCGTCGGAACTATGTTCCACCACCAGGTTTCGGGTTGTCACCAAACCGTCAGAGCAGCGATTCCGCCTTCTCCACCCACACGGAATATTCCAACGTGAACAAATCCGTATCCACCGAAGGGAAAGTGACACCGGCGAGTACCGACCGCAAGCGAAGAACCGGCAGCGATATCAACGACGACCGCCATGACTACCGCACCAATACTAAGCGCGAAAGCCTTACGAGGCCAAGCAAGAAACCAAAATACATGAATACTTCCATGGACTCTGATGACGATGACAATGGCGGCAGTCTAACAGCCGAGAGTGTCTGCACCGAACCTAATGAAATAACTCCAAAAAACGAGTTCAAATGCACCAAATGTGCTAAAGAATTTAAGACGGTATACGGTTTGAACAACCACATGAGATCCCACCGTCAGGACAAATTGGAGGGCACGGCGACACCGACCAGCACGGCGCGGGGGCGCAGCATCGAAAGTGACAATGCGTCATCAAGCAGCAGGCAAGACTATCCAAGCAGCACGAAACGTGTCAATGAGCTCAGAAGATTAGGTAAAACAGCAAAGCGTAACTTGAAGGATTCATCAATAGACTCGGACGATGACGACAATGGCGATTCCAGTTTCAAAAGTGAAACCGCCGGCACTGATTCTGATGATTCAGCCGCAAAAAAATTGTACAAATGCCAAAAGTGCCCTAATGAGTACACTTCGTGCCGGGCGTTAAACTCGCACATGAGGTTTCACAAACGGGATAGTTTAAAAGAAGAACCGCCAGCCGCAAATACAGCGTCGACATCGACCGTGCCAGAGGTACCTGACGAAGACAGCCTTAGTTGTATAAAGTGCGGCAAAACTTATAAATTGAAGATAATGCTGAAGCGTCACCAGCAGATCTGCAAGGTGACGCCGCAAAAGCAGCAGTCACCAGAGAAGCAGCCAACGCTGCTAAAACAGCAAACGCCACAAAAGCAGCCAACACCACAAAAGCAACAAGCACAGAAGGTGACACCCCTAAAACTACAGAATCTACCGCAGAAGCAATCGACGCCGCCGGAGTCGCCGCAAAAACAGTTGCTCGTGTGCCTCGAGCCCGTCGACGGCAAGCACAACGTGAAAGTGGAGTGTGATATCTGTTCCTCAAAGTTCAAAACTTTGGAAAACTTAAATAAGCATTTGAGGGTTGTTCACGCAGCCGCGCCTAAAAGGTATTCTGCTCGCGCAGCCGGCTCTGTCTCCGTCACTTGCATCTACTGCCGCGAGTCTTTCGACGACTATTACGTACACAATGCGCACTTTAACACGTGCCCTAAAAAGGACAGCCGGGAAACTTTCAAGTGCCCTCTCTGCCTGGTGGTATCGTTTAAGAAGTTGGCGTACTTCGCGCACATAAAGAATAATCACTTCGAGCCGGAGACACGCTTGCAGCTAGACTCTAAGGAGGAGGATCTCAAGTGTCGGTTCTGTAACAAGCAACTCGCGACCCAGCAGCTGCTGATCACGCATTTGGCGGCGCATATGTCCAACATCGACGAGGCAGTTGCCAGCGATGAAAACAGAACCGTAGTGACGCCTAACACATCTACACCTGAGACATCGAAAAACACACTAAACTGCGTCCACTGCAAAAAAGAATTTAAATATAAACGTTCGTTGCTGAACCACGAACTGTCGTGCACGAAACGAGAGGACGAACCGGAGGGGAAAGAAGAAGAGGACGCGAACGAAGCGGATTCCAGTCAGGACGAGGTGGATGACAACACGTGCGACATCTGTGAGAAGCAATTTTCGTATAAGGCGTTGTTGTTGCACCACAAGCGGACCAAACACACCATGTGCGCGGGGGTTAAGAGAGCCAGTATCACACTCAAAGACTGTGCGGTGAAGTGCATGATTTGCGACATTGATATGAAGGTCAAGGACATACACGCGCACAATAAGGAGCATATATCGATGAATATGAAGCCGCGCAATATCTACACGTGCGGCGAATGCGGAGAATTCTTCAAGAACTTAAGCGCGCTCGCCACTCATATCAAATTTGTACACAGATTAAAAAAGGAGACACCTAATGCAAAAAAGTACCAAGGTATTGACCCTTCGGCATTTTGCGAAGTAGTAGTGGCAAAGACGGAGCCCCAAGAGTGGCCGCAGGGCGACTTCAGTTCTATGCCGGATGGTGTGGTGAAGATCGAAGGCGCGGCCAATGCCGAGCCCACTGCGTTTGTATGCCCCACTTGCGGCAAAAAAATGCCTTCAGCCACGTCTCTGAGGTGTCATATGGCCTGCCATGTGCGTTACGCTGGAGCAGCCACTGGGAAACTCGAATGCTTCGTCTGCAAAGAGACATTCAGATTTCAAGTGCACCATAAGATGCACATGCGCGTGCACTACAACGACACCAACCTGGACCCGAAGTTTCTCACGTGTTCCATCTGCAACCGCAAGAGCAAGAACCTCCGCGCCGCCCGCGCACACATGGCCTTCCACAAGCAAACTCGTTTCCAGATCAAAGACTATCAATGCTCATTGTGTAAAAAAGTATTTCAGAACAGGAGAGTGTACCTTTACCATATGTCTATACATTATAGAAGGGGAGATAGTGCTGGACTAGGACCGGGAATACCTAAAGAAGGCGATAATACCCTGGCCGACACGCTTACTTGTGAGCTGTGCGGGAAAGTGTGCGACTCGGAGGTGTCGCTCAAGCACCACATCATCTGGCACAAGTCGAAAGGATCGCTGTACGGCGCGCGACACGAGTGCCATATCTGCAACATGCAGTTTACCAACAAGCGTACGCTCACTATACACATACGCACGCACTACGAGAACGACAACGGCCCGTACAAATGCCACCTCTGCGAAAAAGGTTTCACAGACGAAGATTACTACCGTAGACATTTGAAGTCGCACAATTTTGACCACTCGTCCCATAAGAAGCGAATAGAAAGACTACGGAAAGATCAAGTTAAATGTCCCATTTGCTCGCGGTATTATCCAGATTTGGTGAAGCTCATTCGACATCTAAAACGAACTCATCCCGAGAGCAAAATGGTCAAAGCGGATCCGGATGCGCCGCCGCAACGTTTCTATCCATGCCAGTTGTGTGCTAAAGTATTTATGGATGAACGACGACTGCAGTTCCATAAGGAGGCCCATCTGAGAAAACCAGTATTGTTCAAATGTAAGTTTTGCGGTAAAAAGACAATATCGCTGAAGTCCCATAGAATTCATATTAAAGGTCATTTGGCCTCAAAGCACATCGACAAGCCTTTAAAGTGTCCCCACTGTAGTGAAACCTTCGTGAAGGGCTACGGGTTGCATCACCACCTGCGCGACGTGCATGGCATCAACGAGACGTGGATTGCCGATAGAACGGAAGAGGATCTCAATGGACCACTCAAAGACCTTCAATGTTCCGTGTGCCATAAAATATTAGCTAGTAAAGGCAACTTCCAGCGACATATCGACTACCACAACTCATTGAGATGCAATTATTGTTTCCAATACTTTAGTTCCCTGAGATTTCTCGAGGGTCATCTATCTTTCATGTGCGAAAAAAAGAAATTAGTGGGCGAAACGGAAGTTTACCCAAAGCGAGTGAAATGTCACGTTTGCTACAAAGCTTTCCACTTACAAGTGAAACTGGATTGCCATTTGCGGACACAGCACGGAATCGCCGTGACGAAGGAGGCGTCGGCCTGTAAGCAGGAGATCGTTTGCGACTATTGTTTCAAAGTGTTCGAAAATGAATACGCGTTGAGCACGCACAAGATTTACCACAGGACCATCGGCTACTATGGATGTAGGTACTGCCCAAAAAAATTCAACACATTGACACTTTATAGGAGACACAAAACTACTCATCTATACGTGTTGAACGTTGACAATCCCACAAAATGTGACCATTGCGACGAAAGGTTCGTGGCTTTCAGAGACATGATCACGCACATGAAAGACGAACACGGCGACGACAGCGAGTGGATCGTGATGCCTAAAGACTCTATAGAGGAAAAGTGCGGTATTTGTAACAAAACTTTCTTCAACTTGCACAAACATCTGTCCTACCATGAAGAGAATAAATGTAAGAAATGTGGGGAATATTTCTTTTCTGTGGTCGATTTTGATAACCACCTTTGCGCTATAGAGAGCGACGACGAAGGAAACTCAAATTATAATAATGGTGATAAGGCCAAATACGAGGAATGTAACTTCTGCTTTAAACCTATCACGAGCACTAGCTCTAAGCTAAAACACGATAAAATACACAAGGGCTCCGGGTCGATATCGTGTCGCTTCTGCCGTCTCAAATTTAAAACCATAGATGCTTTTAACATACATGCTTTCACCCACCGAAGTAGTAAATATAATAAGAAGCCGATTAAATGTCGTCAGTGCGGCGAGAAGTTCGTCAAATACGGACCTTTTATAAAGCACATGCGTAACGTGCACAAGTCCGCTTTAAAGATACATTATCGAGCGACCGTGAAGCCTGAGCGGTGTGTTGTGTGCGGCGACGATTTCCCCAACCTGCACAATCACTATCGGGCACATCTTCTGAACCAGTGTCAGCAATGCCGGAAATATTTTACCTCATACAAAATATTTACTATGCACGAATGCGACAAAGAGGACAGGGATCCGTCAAAAGTGTTCACTTGTGATGAAGATTTAGTAACTCTCATAAACGCTTACGTGCCTAAAGATGAGAAGAATAATGAGAAGTTGTATGGAGAGAGCTGTGACGAGGACGATGGTCCAGAGGAAAATGGCACTAATGACGACAATGAAGTGTATTCTCAAGATGAAGAAGCTGATGTAAAGAAGTTCGACACATTCAAATCCCCCATTATATCTGATGTCCTCTCTCTGTATCAGAAGGAGGAAGTGGCCAGCCAGGATAGTGAGAGTAACAGTCAAACAGAGGAAAGAGACGTGTTTGTTATTAGCAGTGATGAAGAATCTGCGGATGTCGATCACCGCTCCCCAATCGTGCTTGACGACTGA
Protein Sequence
MALELGKCRLCLKLGDFYSIFTVDNGVQLAEMVMECSRVKIYEGDGLPEKVCSECIQKLSGAYIFKQQCERADQDLRRNYVPPPGFGLSPNRQSSDSAFSTHTEYSNVNKSVSTEGKVTPASTDRKRRTGSDINDDRHDYRTNTKRESLTRPSKKPKYMNTSMDSDDDDNGGSLTAESVCTEPNEITPKNEFKCTKCAKEFKTVYGLNNHMRSHRQDKLEGTATPTSTARGRSIESDNASSSSRQDYPSSTKRVNELRRLGKTAKRNLKDSSIDSDDDDNGDSSFKSETAGTDSDDSAAKKLYKCQKCPNEYTSCRALNSHMRFHKRDSLKEEPPAANTASTSTVPEVPDEDSLSCIKCGKTYKLKIMLKRHQQICKVTPQKQQSPEKQPTLLKQQTPQKQPTPQKQQAQKVTPLKLQNLPQKQSTPPESPQKQLLVCLEPVDGKHNVKVECDICSSKFKTLENLNKHLRVVHAAAPKRYSARAAGSVSVTCIYCRESFDDYYVHNAHFNTCPKKDSRETFKCPLCLVVSFKKLAYFAHIKNNHFEPETRLQLDSKEEDLKCRFCNKQLATQQLLITHLAAHMSNIDEAVASDENRTVVTPNTSTPETSKNTLNCVHCKKEFKYKRSLLNHELSCTKREDEPEGKEEEDANEADSSQDEVDDNTCDICEKQFSYKALLLHHKRTKHTMCAGVKRASITLKDCAVKCMICDIDMKVKDIHAHNKEHISMNMKPRNIYTCGECGEFFKNLSALATHIKFVHRLKKETPNAKKYQGIDPSAFCEVVVAKTEPQEWPQGDFSSMPDGVVKIEGAANAEPTAFVCPTCGKKMPSATSLRCHMACHVRYAGAATGKLECFVCKETFRFQVHHKMHMRVHYNDTNLDPKFLTCSICNRKSKNLRAARAHMAFHKQTRFQIKDYQCSLCKKVFQNRRVYLYHMSIHYRRGDSAGLGPGIPKEGDNTLADTLTCELCGKVCDSEVSLKHHIIWHKSKGSLYGARHECHICNMQFTNKRTLTIHIRTHYENDNGPYKCHLCEKGFTDEDYYRRHLKSHNFDHSSHKKRIERLRKDQVKCPICSRYYPDLVKLIRHLKRTHPESKMVKADPDAPPQRFYPCQLCAKVFMDERRLQFHKEAHLRKPVLFKCKFCGKKTISLKSHRIHIKGHLASKHIDKPLKCPHCSETFVKGYGLHHHLRDVHGINETWIADRTEEDLNGPLKDLQCSVCHKILASKGNFQRHIDYHNSLRCNYCFQYFSSLRFLEGHLSFMCEKKKLVGETEVYPKRVKCHVCYKAFHLQVKLDCHLRTQHGIAVTKEASACKQEIVCDYCFKVFENEYALSTHKIYHRTIGYYGCRYCPKKFNTLTLYRRHKTTHLYVLNVDNPTKCDHCDERFVAFRDMITHMKDEHGDDSEWIVMPKDSIEEKCGICNKTFFNLHKHLSYHEENKCKKCGEYFFSVVDFDNHLCAIESDDEGNSNYNNGDKAKYEECNFCFKPITSTSSKLKHDKIHKGSGSISCRFCRLKFKTIDAFNIHAFTHRSSKYNKKPIKCRQCGEKFVKYGPFIKHMRNVHKSALKIHYRATVKPERCVVCGDDFPNLHNHYRAHLLNQCQQCRKYFTSYKIFTMHECDKEDRDPSKVFTCDEDLVTLINAYVPKDEKNNEKLYGESCDEDDGPEENGTNDDNEVYSQDEEADVKKFDTFKSPIISDVLSLYQKEEVASQDSESNSQTEERDVFVISSDEESADVDHRSPIVLDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00858785;
90% Identity
iTF_00859710;
80% Identity
-