Kina009291.1
Basic Information
- Insect
- Kallima inachus
- Gene Symbol
- -
- Assembly
- None
- Location
- HiC:7181511-7200424[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.37 34 5.5 0.2 3 21 8 27 6 28 0.85 2 14 1.7 1.6e+02 3.4 0.0 2 21 34 53 33 54 0.92 3 14 6.7 6.2e+02 1.6 0.2 13 23 99 109 98 109 0.90 4 14 0.12 11 7.1 0.3 1 12 205 216 205 225 0.86 5 14 5.8 5.3e+02 1.8 0.4 1 19 352 370 352 370 0.96 6 14 1.5e-05 0.0014 19.3 0.4 1 23 377 399 377 399 0.98 7 14 2.1e-05 0.002 18.9 0.8 1 23 414 436 414 436 0.98 8 14 6.1e-05 0.0056 17.4 1.4 3 23 490 510 488 510 0.96 9 14 0.00048 0.044 14.6 2.6 1 23 526 548 526 548 0.98 10 14 1e-06 9.6e-05 23.0 4.5 1 23 554 576 554 576 0.98 11 14 0.0021 0.2 12.6 6.2 1 23 582 604 582 604 0.97 12 14 1.4e-06 0.00013 22.6 0.4 1 23 610 632 610 632 0.98 13 14 0.00019 0.017 15.9 0.1 1 23 636 658 636 658 0.98 14 14 0.00016 0.014 16.2 0.2 1 23 666 689 666 689 0.96
Sequence Information
- Coding Sequence
- ATGGGAGACCCAATATTATATTGTCCTCTTTGTTGTAATGCTACATTTGATTCGAAACAATCTCTTATTGAACATATATCTATTATATCATCAAATTTAATATGCCCCTTATGTACAAATAGATTACCTTCAATAGAACAACTTACGGATCACCTAAAACTCGATAATTGCGAACTTTCAAATTCAGTTCAAACCATCGTATTTGACACTAATACACATATTGAAACTAATGAGAATTCTTTAGATAATTCAAATCTTAAACTAGAACTTCCTGAAAAGGGAAATCATTTACAAAATGAGAATTTAGAAAATCATATAACATCACATACAATTAAAGTAAGTAATGATTCCGATGTTAGTAAAATGTATGTTGAATTACTAAGCAAGCAAATGATGAAGCCATGCCTTCAGACCCAAGAGCTAAAATTGGTGAAGGAAGACGGGGAGAGTCGCTATGTGATCCTTACTGATGAAGAGTCTGTATTAAATCAAGGAGTAGCAATTGTGACTAAGCAGAACAATGATGGAACTATATCTTTAACTGCTCTTAAAGATGAAGAACCTGAAGGAAACCCTTTAGAAGAAGACAAAGATAAAAACCAGGAAGAAATATATAGTTGTAATACATGTGGAGTATCATTTTCATCAGTTTTGGAACACATACAAAATTATCACAATGATCAAGATGTTGTGGTTGAGGAACCAATGGAAGAGAATACTGTTCCAATAGAATATGAAACAGTTTCAAACGAAGAAGTTTTAGCAGACAAGCAACACTCCAGGCGAATGATAACAGAGACAGGAGATATTATAGAGACACCTTTAAATGAAGATGAAGATGCAGATTCAAATAAATCAATTAATGTTGTAGTTCCAATAAAGTCGGAAGCAGTAGACAAACAGGGTAAAACATGCACACGCCGCTATGTTCAGATAGATAAATTCTGTAACAGCATGATAAAGGACATCAAACCAGTTGATGATAAAAATGGTCCTTATCATAATGTAATTGTGAAAGAAATGCAAACAACTTCCGGTAACAAAATGAAGGTGTACAATTGCATGTCTTGCAATGTTTATGTTTCCTCGCTGTCGGAATTCAAGCAGCATCCATGTAAAATTTTAAAATACTCATGTCCACAATGTCCCGTTGCTTATGAAAACTCAAAATCATTATGTGCACACATGAAAGTACATAAATCAAAAGGAGATACCAATTATATTATAGCTCCTGTGAAGTTTGAATGTGAAATATGTTCTACAATATTCCCTACGAGCAAATCCTTAAAACTACATAAAAGAATGCATGATCCTATCAAATCTCGTCCAATAGAACCTCCCGTGGAAACTTCGAGAGGCAATATAGCTAGTGATGACAAGTTCCTCTGTTCGATATGTGATAAACTTATACCAATTGACTACCGGACAATACACCAGAACTCACACAAGAGTAGCAACAAAATAAACTGCGATATTTGCAACAAGAAGTTCCATTCTAGAGAATATTTGGAGATGCATATGAGTGTACATAATATAGATAAGGTAATAGTCGGCAATCAAGACAAGTCGCTACCATACACGTGCCTATATTGCAACAGAAAGTTTGCGAGACCGCATGAAAAGGTTAAACATGAAAGGATACATACAGGCGAGAAGCCGCACTCGTGCGAGATCTGCGGCAAGTCGTTCCGCGTGTCGTACTGCCTCACGCTGCACATGCGCACGCACACCGGCGCGCGCCCCTACGCCTGCCCGCACTGCAACAAGAGGTTTAAAGCCCATAGTGTGTACAATCATCATCTATTAACGCATTCAGAGGTGCGCGCATACAAATGTCCGTACTGCCCTAAAGCGTTCAAGACCTCCGTTCAGCTCGCCGGCCACAAGAACTCGCACACTAAACCCTTCTCTTGCCAGCAATGTAACAGACCGTTCGCGTCGCTGTACGCAGTGCGGGTTCATATGGAGATCCACTCGCGGCAGAACAGCCTTAAGTTCTCGTGCTCGCTGTGCGGCGCGAGCTACGCGCGCGCCTTCGCGCTCAAAGACCACATCAAGCAGACGCACAAGCAGGACGTCGACTCGCCCGACCACCTCACGATACTTAAAGAAGAAGACTGTATGGTGCAAGAAAATGCGGACGTTGACTCAGACGGAATGCATCTCAGTAAAGATTTGCCGCAAGAGATCAACGAGTTGGACATACATACTAACGAACTGATCATACCTTAA
- Protein Sequence
- MGDPILYCPLCCNATFDSKQSLIEHISIISSNLICPLCTNRLPSIEQLTDHLKLDNCELSNSVQTIVFDTNTHIETNENSLDNSNLKLELPEKGNHLQNENLENHITSHTIKVSNDSDVSKMYVELLSKQMMKPCLQTQELKLVKEDGESRYVILTDEESVLNQGVAIVTKQNNDGTISLTALKDEEPEGNPLEEDKDKNQEEIYSCNTCGVSFSSVLEHIQNYHNDQDVVVEEPMEENTVPIEYETVSNEEVLADKQHSRRMITETGDIIETPLNEDEDADSNKSINVVVPIKSEAVDKQGKTCTRRYVQIDKFCNSMIKDIKPVDDKNGPYHNVIVKEMQTTSGNKMKVYNCMSCNVYVSSLSEFKQHPCKILKYSCPQCPVAYENSKSLCAHMKVHKSKGDTNYIIAPVKFECEICSTIFPTSKSLKLHKRMHDPIKSRPIEPPVETSRGNIASDDKFLCSICDKLIPIDYRTIHQNSHKSSNKINCDICNKKFHSREYLEMHMSVHNIDKVIVGNQDKSLPYTCLYCNRKFARPHEKVKHERIHTGEKPHSCEICGKSFRVSYCLTLHMRTHTGARPYACPHCNKRFKAHSVYNHHLLTHSEVRAYKCPYCPKAFKTSVQLAGHKNSHTKPFSCQQCNRPFASLYAVRVHMEIHSRQNSLKFSCSLCGASYARAFALKDHIKQTHKQDVDSPDHLTILKEEDCMVQENADVDSDGMHLSKDLPQEINELDIHTNELIIP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01078418; iTF_01506561; iTF_01508271; iTF_01507442; iTF_01079254; iTF_01080921; iTF_01080105; iTF_01078415; iTF_01078416; iTF_00824984; iTF_00695904;
- 90% Identity
- -
- 80% Identity
- -