Ipod011844.1
Basic Information
- Insect
- Iphiclides podalirius
- Gene Symbol
- retn
- Assembly
- GCA_933534255.1
- Location
- OW152826.1:9398703-9406570[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-19 2.8e-16 59.9 0.0 17 89 62 132 57 132 0.95 2 2 5.7 1.5e+04 -3.3 0.0 25 38 251 264 239 269 0.72
Sequence Information
- Coding Sequence
- ATGCGATGCGATTTGGCACGCTCGCGCGCCTTTACGGCCCTCGCGAGGCGCGCCGTAAAGGGTTTTACAGCAAACCCCCCCCCCCCCCCCCCCTCGCGCCACCGCTCCTCCGCCGGCTCCTTCCTCTCCCCGGTGCATTGCGGTCGCTTCCGCGGTCGCTTTGATGTGCGGACGGCCGTTGTCGGCACTCCCATAAACCGGCTGCCCATAATGGCGAAGTCCGTGCTCGACCTGTACGAGCTTTACAACCTGGTCATCGCCCGCGGGGGGCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTGAGACTGCCCTCCTCTATCACCTCCGCCGCTTTCACGCTGCGCACACAATACATGAAGTACTTGTATGACTACGAATGCGAGAAGAAGAACCTGTCAACCCGCAGCGAGCTGGACGCCGCCATTGAGGGCAACAAGAGGGAGGGACGCCGCGCCTCTGGACAGTACGACGCTCAAGCCGCTCTGTCTATGCCTTCGTTGAACCGCGGCGTATCACTGTCAATGCCGCTAAGTCAGCCGCTGGCGCTGCCACTGGGCGGAGTACCGCGCCTGCCGATGCACGCGCCACACCTGCACAACCACGACATAGAATTCCGCGTGAGGGAGTACATGAAGATGATACAGCAACAACGCGAGCTAATAAGAAACGGCTCCGAGTCGCCCCCAGGTAGTGGTGGGACGATGATGTCGCCCCGCGAGGCGGCGTTGAGCGCCATCGACGTGTCGCGCCTCACTCTGTGGTCACTCTACAACAACAACAACAACAACAACAGCCCCCAGCCGGACCTCGAGCCGCAGCGCGAGGCGCTCAACCTGAGCGAGAGCCCGAACTCGAATGCGAGCGGGGGCAAGCGCGAGGCGTGCCGCTCCCCCCCTCCGCCCGCCAAGCGGCGCACCCCGCGGCCCCCGTCGCCGCCCCGCCACCCCGCGCACACCGCCCACCCCGCCCACGCCCAGCACGCCGCGCACCTGCCGCAGCTCAACGGCAACTCGAACGGCGTCAACGGCGCCGCCTTCAAAATAACCACCAGGGGTGACGCGACCTCTGGTGACCAGCAACTCGTCGTCTCAATCGAACTGAACGGAGTCACGTACGAGGGCGTTCTCTTCCCATCGCAGAACGGAAGCGGTCAAAACGGCCACAGGCAAATGGTCTCTTAA
- Protein Sequence
- MRCDLARSRAFTALARRAVKGFTANPPPPPPSRHRSSAGSFLSPVHCGRFRGRFDVRTAVVGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALSMPSLNRGVSLSMPLSQPLALPLGGVPRLPMHAPHLHNHDIEFRVREYMKMIQQQRELIRNGSESPPGSGGTMMSPREAALSAIDVSRLTLWSLYNNNNNNNSPQPDLEPQREALNLSESPNSNASGGKREACRSPPPPAKRRTPRPPSPPRHPAHTAHPAHAQHAAHLPQLNGNSNGVNGAAFKITTRGDATSGDQQLVVSIELNGVTYEGVLFPSQNGSGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154802;
- 90% Identity
- iTF_01156067; iTF_01495569; iTF_01494105; iTF_00249499; iTF_00957746; iTF_01175994; iTF_01494847;
- 80% Identity
- -