Bhed016917.1
Basic Information
- Insect
- Byasa hedistus
- Gene Symbol
- retn
- Assembly
- GCA_029286795.1
- Location
- JAGSMW010000022.1:6037886-6044143[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-20 5.6e-17 62.7 0.0 8 89 11 90 7 90 0.93
Sequence Information
- Coding Sequence
- ATGCGATTTGGCACGTTTGGCACGCTCTCCCGGCTTTACGGCCCTTACCAAGTGCGCCGCACTCCCATAAACCGGCTGCCCATAATGGCTAAGTCAGTGCTCGATCTCTACGAGCTATACAACCTGGTGATAGCCCGCGGGGGGCTCGTGGAGGTCATCAACAAGAAGTTGTGGCAGGAGATCATCAAGGGCTTACGACTACCGTCTTCTATCACGTCAGCCGCATTCACACTACGCACACAATACATGAAGTATTTATATGATTACGAGTGTGAGAAGAAGAACCTGTCGACCCGTAGCGAGCTGGACGCCGCTATCGAGGGCAACAAACGCGAAGGTCGTCGCGCCTCTGGGCAGTACGACGCGCAGGCAGCACTTGCAATgCCGTCGCTTAACCGCGGTGTGTCGCTGTCGATGCCGCTAGCTCAGCCGCTGGCTTTACCGCTGGGCGGCGTGCCCCGCCTGCCGATGCACGCGCCCCACCTTCACAACCACGACATAGAGTTCCGCGTGCGCGAGTACATGAAGATGATACAGCAGCAACGCGAACTCATCAGAAACGGGTCCGAATCGCCCCCGGGCAACGGCGGTGCGATGATGTCGCCCCGCGAGGCGGCGCTCAGTGCGATCGACGTGTCCCGCCTCACTCTCTGGTCTCtctacaacaacaacaacaacagccCGCAGACCGACCTCGAGCCGCAGCGTGAGGCGCTGAATCTAAGCGAGAGTCCCAATTCGAGCAGCAGCTGTGGTAAGCGCGAGGCGTgccgctcgccgccgccgcccgcgaagcgccgcacgccgcgcccCGCCTCCCCGCGCGACACACCGCCGCGGCACGcgcatgcgcacgcgcaccctgcgcaccccgcgcacgcGCCCCACGTGAACGGCAACGCGAACGGCGTCAACGGCGCCGCGTTCAAAATCACAACCAGGGGTGACGCGGCTACTGGAGACCAGCAGCTCGTCGTGTCTATAGAACTCAACGGTGTTACGTACGAAGGTGTATTGTTCCCATCACAAAACGGAAGCGGACAAAACGGCCACAGGCAAATGGTTTCATAA
- Protein Sequence
- MRFGTFGTLSRLYGPYQVRRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPSLNRGVSLSMPLAQPLALPLGGVPRLPMHAPHLHNHDIEFRVREYMKMIQQQRELIRNGSESPPGNGGAMMSPREAALSAIDVSRLTLWSLYNNNNNSPQTDLEPQREALNLSESPNSSSSCGKREACRSPPPPAKRRTPRPASPRDTPPRHAHAHAHPAHPAHAPHVNGNANGVNGAAFKITTRGDAATGDQQLVVSIELNGVTYEGVLFPSQNGSGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154802;
- 90% Identity
- iTF_00840110;
- 80% Identity
- -