Pmne017485.2
Basic Information
- Insect
- Parnassius mnemosyne
- Gene Symbol
- retn
- Assembly
- GCA_963668995.1
- Location
- CAVLGL010000068.1:29687061-29702096[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-19 5.6e-16 60.7 0.0 16 89 33 104 22 104 0.94
Sequence Information
- Coding Sequence
- ATGCGATTTGGCACGCTCGCTGGGTTTTACGGCCCTTACCAAGTGCGCTGTAAAGGGTTTTACAGCCGAGAATGGAGTGAACGCAGCGATCAAACTTACGGCACTCCTATAAACCGGCTGCCTATAATGGCGAAGTCGGTGCTCGATTTGTACGAGCTATACAACCTGGTGATAGCCCGCGGCGGCCTAGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTACGACTGCCGTCCTCTATCACGTCCGCCGCTTTCACATTGCGCACACAatacATGAAGTACCTGTACGACTATGAGTGTGAGAAGAAGAACCTCTCAACTCGCAGCGAGCTGGACGCGGCCATCGAAGGCAACAAGAGGGAAGGACGCCGTGCCTCCGGGCAGTACGACGCGCAGGCGGCACTCGCTATGCCGTCGCTGAACCGCGGCGTGTCCCTGTCGATGCCGCTGGCCCAGCCGCTGGCGCTGCCGCTGGGCGCCGTGCCCCGCCTGCCCATGCACGCGCCGCACCTCCACAACCACGACATCGAGTTCCGCGTGCGCGAGTACATGAAGATGATACAACAGCAACGCGACCTCATCAGAAACGGCTCTGAGTCACCGCCGGGCAGTGGCGGCACAATGATGTCGCCGCGTGAGGCTGCACTGAGCGCCATCGACGTGTCACGTCTTACTCTATGGTCGCtctacaacaacaacaacaacagccCGCAGCCGGACTTCGAGCCGCAGCGTGAGGCGCTGAACCTAAGTGAGAGCCCGAACTCGAGCGCGAGCGGGAAGCGCGAGGCGTGCCggtcgccgccgccgcccgcgaaGCGGCGCACGCCGCGGCCCCCCTCCCCGCGCGCGAGCGGCGAGCTCGAGCCGcgccgcgcgctcgccgcgcACGCGCACCCGCACGCGCACGCGCCCGCgctcgcgcccgcgcccgcgccgcagcTCAACGGCAACGCGAACGGCGTCAACGGCGCCGCCTTCAAGATCACCTCTAGAGGTGACGCTACCACAGGCGACCAACAACTCGTTGTCTCAATAGAACTCAACGGAGTCACGTACGAAGGCGTTCTTTTCCCCTCACAAAATGGAAACGGTCAGAACGGTCACAGGCAAATggtgtcttaa
- Protein Sequence
- MRFGTLAGFYGPYQVRCKGFYSREWSERSDQTYGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPSLNRGVSLSMPLAQPLALPLGAVPRLPMHAPHLHNHDIEFRVREYMKMIQQQRDLIRNGSESPPGSGGTMMSPREAALSAIDVSRLTLWSLYNNNNNSPQPDFEPQREALNLSESPNSSASGKREACRSPPPPAKRRTPRPPSPRASGELEPRRALAAHAHPHAHAPALAPAPAPQLNGNANGVNGAAFKITSRGDATTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154802;
- 90% Identity
- iTF_00840110;
- 80% Identity
- -