Basic Information

Gene Symbol
Trerf1
Assembly
GCA_011009095.1
Location
Ilumi1.2:37417-57650[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.7 9.3e+03 -2.5 0.1 5 20 247 262 247 263 0.90
2 2 2.4e-12 3.2e-09 37.3 0.0 2 46 926 970 925 970 0.96

Sequence Information

Coding Sequence
CTACAGCAACTGTTAGCTACTGAACCTGCAAAGAGTGGAAATGGAGGGAACAATGATGGATTAACCAAACAACAATTGGATTTGATTCATCAAATCATGGAGCAAACACAAAGACAATCGCATCCAGTCAGCAAACCTTCCACAAAACCGGCAGCGAAGCCTGCAAATAAAACACCAACAAAAATTCAAAAAGTTTGGTCTTCGACGACGCAGCAAAATCTAACAAACAAAACAAGCACCAGCGCGTCGACGCCGCAGGCAAAAGTAACTACAACAACCCCTAGTGCAACCCCAATCCACGCTGCTAATAAAACAGAGTCCAAACCAGTGGAGTGCAACCTTTGTCATAGGAAATTTAAAAATATTCCTGCATTGAATGGTCATATGCGTCTGCATGGTGGATATTTTAAAAAGGATGCAGAAAATAAAAAATGTGAAAAAAAGGATGCCGGTGGTCCTCCATTACAAACGGCAAGTGTTAGTGTACGTGCGTTAATTGAAGAAAAAATTATAAACAAGCGTATAACAAATCCTCAAACATCTACAAGCAGCGACGATAGTTCATCTAGGTCTACAGCACCACCACTTTTCCCTCTTACTGTGCATTCCTCTGCTAACTCTAATGATTTGGACTCAAAAATAACTTCTTTTGTGGTCCCCGCACCACCTCAGCAAACCACAGAGAAAGCTAGAAGACATTCCGATGCGGAGGCTTTTACCATACCGAAGCACCATAATACTCAACAAGAAGCCGAAGCGTTAGCGGACCTTATTTTAAAGAAGGGTAAAGTTTCAGTTAAAAGAACTACCTCGGACCCAGGGCAACCTACTCAACAAGTAATTCAGTTACAAACGGGAGAATCTTTAACGCTTACAGGCGTTACATATCAGTCAGAAGACGGTGGAGGTTATTTTTCTCAGAGCCTTCAAGATGAAGTTTTCACTCAGGTGCAAGACACAATGCTACTACAAAGCGTTGACGCCCAACACCTTACATCAATACAATTTCAAACTGATTCACTTTTACATGATCAAAGTGAAGATCAGTTGCAAGATATTGCATCATTAGAAGATTACGCAAGCGTAACAGCTAGTTTGCAAGACACAGTACAGTCACCCTCTTATCAATCAAATCATTCAGTAAATCAAGATCTACAAGCTGTTTTAGACTCACCCCTACCTGAAAGTTTGGCAGAATTCAGTACATTTCATTCAACAACAAATCTGGATATGCCCTCCCCTGGATATCAAACTCAATCCCCTGCACAATATACAGGATCACCTCATGCGTCTCTTACTGCTCAATCTCCTTTACAATCTCCTTTAGTGAGGCATGATTCTCCTGGTTTTGCTTATCCTACACCACCGGCAAGTCACGAAGGACAAAGTCCCTGCTTTGGACAAAATTCCATATTACCGATGGTTTCTCCTAAGCAAAATGACTTCACTCAGGTAGGAGGCAGAGAATTGGAAGAACCTCCACAAGCATCTTCTCCACTTTCGGCTGCCTTTTTCACTTCAACTATGTCGAGCTCTGCCGCAGTTGAAGAAGCTTTAGAAGAAGTTCTCCCTGGAGAAAGTATATCGACAGACGATATCTACCCTCTGACAAACTCACCAACTCCTCAGTCACCTCTTTCTGTAGGTCTCACGCCGGTTGCTTCACCTTTGTCAAATATACCAGCTTCTTCGGTTTCTTCGCCACATCCTTCAACTACGTACACACCGTCCCCTAATAACGTTACATTTCCCATGTCTCCTCATTACTCTTTTCAATCACAAATGATGCCAAATTCTGACGACCCGTTATTATCAAGTAGTCCTAAAGATACAAAGAAAAAGTTTGAATTCAACGGCCTTCCATTAAAAGTGATAAGTAGTAACGGACTCCTAGATTTAAACAATTCGAATTTTACTGGAATCTTAGTTGATAGTAATGGAGAACTAAAACTAATACAAACGAATGGAAATGCGCTTCATACCAAAAATATTGTAGTAACAGGAACTTCCTTGGTACACGCACAAAATGTTTTGAGTAAAGAAGGGGAACATAAAAATGGTGAAAAAGCACACAAAATCAATCCAATATTACACTGCACGATACCTGCTAAGCAGTCACCCCATGCTACAAGGGCGTGTGCTGATAGCAGCAAACAAGATGGATCTGACAATATTTTCGTTAGTCCGACTATAGTACCTGCAAGCCCCGTTAGGATATCAAGAAAGCGTCCTAGATCTGAACCTTTACAGCTACCAGTTCTACATCAATCTAGATTGAGAGCTACAAGAAGTAGACCACACGGTTCTTCGACATATACCCCACCACCTTTGTTAAATCCTACCAGATCAGGGTCCGGTTTATATTGTGGATTAAAGCATCGATTAACCAGTGAAACCCGGGAGGATATCTTAAGTATCTGGAACAACGAATCCGTTCCGGAATCAGATTCAACCCCACATATTAATATTGGTCCCCAGTTTCAATGTTCTGTTCCACCATGTGCAAAATCCATGCATCATGTAGATCAAGAACCTAACCGTGAATATTTGCTTTGGGGGCCTTCAGGTGGTACATATGCTGACAACGAAGTTGACATGTACTTGGATTTCGCGTGCTGCGCAGCAGTCCCTGGTGGAGGACGCAACAAGGAATACGCTATGCATCTTTTGCACATGTGCGGAGGAAACATACACGACGCAATGTTAAGGCTAATGCAACCATTTCCCGCACTTCCCATTGATCATCCGTTACTTCACTATCAGTACAGTGAAAGTGATAAATGGTCGCCGGAGGAAATAGAAGCTTTCCAGCAGGCATTATTTAGATATGATAAGGACTTCTTTAGCATAGCACGAGAGATTGGTACAAAAACAACAAAGCAGTGTGTGCAATTTTATTATGTTTGGAAAAAGGTTTGCGTCGATGAATATAGACGTATGAAGCTTTCTAGGGAGGCAAGACGTGGTTGCCCAAAAGGATTTGAATCGGAGTCGGAAGAGAAACCCCATCCTGATGCTAAGTTATTAGGAATTGCTGATTCCGAATCACCAATACCAGTTCACGAACACAAAAGCTTTCTTTGCGAATTTTCTGATTGCTCAGCGAGTTTTAATTCCAAGGCAGCTCTAAATGGGCATATTAGGATTCATGCGGGAACCGTTCGACATTCTCCAACACCGTCGACAGTTCTAGAAAGACGAACGACATCTACAACTCCTACCTTGTGCCATACAGATTCTTCCGAAGATTATCCTTGTAAGATATGCGGGAAAGTATTTACCAAGATCAAAAGTCGCAGCGCTCACATGAAATCTCATCGGCCCCCTGATGCTGAGCCAATCAGAAAAAGAGAAAAAGATCTTTCGTGTTCTCCTAGTTTTGATGTATTTGTATCGAGTCCTTTTAATACTTAG
Protein Sequence
LQQLLATEPAKSGNGGNNDGLTKQQLDLIHQIMEQTQRQSHPVSKPSTKPAAKPANKTPTKIQKVWSSTTQQNLTNKTSTSASTPQAKVTTTTPSATPIHAANKTESKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKCEKKDAGGPPLQTASVSVRALIEEKIINKRITNPQTSTSSDDSSSRSTAPPLFPLTVHSSANSNDLDSKITSFVVPAPPQQTTEKARRHSDAEAFTIPKHHNTQQEAEALADLILKKGKVSVKRTTSDPGQPTQQVIQLQTGESLTLTGVTYQSEDGGGYFSQSLQDEVFTQVQDTMLLQSVDAQHLTSIQFQTDSLLHDQSEDQLQDIASLEDYASVTASLQDTVQSPSYQSNHSVNQDLQAVLDSPLPESLAEFSTFHSTTNLDMPSPGYQTQSPAQYTGSPHASLTAQSPLQSPLVRHDSPGFAYPTPPASHEGQSPCFGQNSILPMVSPKQNDFTQVGGRELEEPPQASSPLSAAFFTSTMSSSAAVEEALEEVLPGESISTDDIYPLTNSPTPQSPLSVGLTPVASPLSNIPASSVSSPHPSTTYTPSPNNVTFPMSPHYSFQSQMMPNSDDPLLSSSPKDTKKKFEFNGLPLKVISSNGLLDLNNSNFTGILVDSNGELKLIQTNGNALHTKNIVVTGTSLVHAQNVLSKEGEHKNGEKAHKINPILHCTIPAKQSPHATRACADSSKQDGSDNIFVSPTIVPASPVRISRKRPRSEPLQLPVLHQSRLRATRSRPHGSSTYTPPPLLNPTRSGSGLYCGLKHRLTSETREDILSIWNNESVPESDSTPHINIGPQFQCSVPPCAKSMHHVDQEPNREYLLWGPSGGTYADNEVDMYLDFACCAAVPGGGRNKEYAMHLLHMCGGNIHDAMLRLMQPFPALPIDHPLLHYQYSESDKWSPEEIEAFQQALFRYDKDFFSIAREIGTKTTKQCVQFYYVWKKVCVDEYRRMKLSREARRGCPKGFESESEEKPHPDAKLLGIADSESPIPVHEHKSFLCEFSDCSASFNSKAALNGHIRIHAGTVRHSPTPSTVLERRTTSTTPTLCHTDSSEDYPCKICGKVFTKIKSRSAHMKSHRPPDAEPIRKREKDLSCSPSFDVFVSSPFNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2