Rgig004750.1
Basic Information
- Insect
- Rhagophthalmus giganteus
- Gene Symbol
- Trerf1
- Assembly
- GCA_036326145.1
- Location
- JARFJA010000001.1:55508742-55513396[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3 1e+04 -2.4 0.1 5 20 179 194 179 195 0.90 2 2 9.9e-10 1.6e-06 28.9 0.0 2 46 856 900 855 900 0.96
Sequence Information
- Coding Sequence
- ATGCAGACACAGCAGAACTTAACGAGCAAAACCGGGAACAGCGCGTCGTCGTCTCAAGCGAAAGTGACAACTACAACTCCCAATACAACCCCGATCCAGTCCACTAATAAAACGGAATCTAAACCTGTAGAGTGCAACCTTTGTcacagaaaatttaaaaacatcccCGCATTAAACGGTCACATGCGTTTACATGGTGGATATTTTAAGaaggatgcggaaaataaaaagtgtGAAAAAAAGGACGTGAGCGGACCGCCGCTTCAAACGGCAAGTGTAAGCGTACGGGCGTTGAtcgaagaaaaaataattaataaacgtatCACTAACCCTCAAGGGTCTGGTAGTGGCGATGAAGCATCGCGAACGTCGGCTCCACCCCTTTTCCCTCTTACAGTGCATTCCTCGACGAATTCCAACGATTTGGATTCAAAAATTACTTCGTTTGTGGTTCCTGCCCCTCCTCAACAAACTACAGAGAAAACGCGGAGACATTCCGATGCAGATGCTTTTACTATACCTAAACACAACAATACTCAACAAGAAGCCGAAGCTCTAGCGGatcttatattaaaaaaagggAAAGTATCTGTTAAAAGAACGACCTCCGATCCGGGTCAACCCTCTCAAGTTATTCAACTACAAACGGGGGAGTCTTTAACGCTCACAGGTGTTACATATCAATCGGAAGATGGAAGTGGATATTTTTCGCAAAACATTCAAGATGAAGTTTTTACTCAAGTGCCAGATACGATGTTATTACAAAGCGTAGATGCGCAGCATTTGACTTCGATTCAGTTCCAAACTGATTCTTTATTACACGATCAAGGTGAAGATCAACTTCAAGATATCGCATCGTTAGAAGATTACGCTAGCGTAACGGCTAGTTTGCAAGATACCGTTCAATCACCAACGTATCAAGCTAATCATTCAGTCAATCAAGATCTACAAGCGGTTTTAGATTCTCCTTTACCAGAAAGTTTAGCTGAATTTAGTACGTTTCATTCGGCGTCAAACTTGGACATTCCATCTCCCGGATATCAAACGCAATCGCCTGCGCAATATAACGAATCCCCTCACGCATCCCTTACTGCTCAATCTCCTCTGCAATCACCTTTGGTACGACACGACTCTCCGGGTTTCGCATATCCAACACCCCCCGCTAGTCATGAAGGTCAAAGTCCGTGTTTTGGACAAAATACTATTCTACCTATGGTTTCGCCGAAACAAAACGACTTTAATTCGGTAAGTGGGCGAGATTTAGACGAACCACCTCAAGCATCTTCACCTTTATCTGCGGCATTTTTTACTACCACGATGTCAAGTTCTGCGGCGGTGGAGGAAGCTCTGGAAGAAGTTCTACCTGGTGAAACCATATCGACGGACGATATTTATCCATTATCAAGTTCTCCTACACCACAATCTCCTCTTTCGGTCGGTCTTACGCCTGTTGCATCTCCCTTATCTAACATACCGACATCTGCAGTTTCTTCGCCGCATCCCTCTACCACGTACACGCCGTCCCCTAATAATGTAACGTTCCCTTTATCGCCGCATTATTCATTTCAATCTCAAATGATGCCAAATTCCGATGATCCTTTGCTATCGAGTAGCCCTAAGGATACtaagaaaaaatttgaattcaacGGCCTTCCTTTAAAAGTGATAAGTAGTAATGGACTTCTAGATCTAAATAGCTCAAACTTTACTGGAATTTTAGTAGATAGTAATggagaattaaaattaatacaaactaaCGGCAATGCGATTCACACGAAGAACATTGTTGTAACAGGAACTTCTTTAGTACACgcacaaaatattattaataaagagACGGACATAAAAAATGGAGAAAGAACGCACAAAATTAGTCCTCTACTTCAATGTACTAATCCTACAAAACAATCACCTCAATCAACAAGAGGATGTAACGATAGTAATAAACACGATGGAACCGATAACGTCTTCATCAGTCCAACAATgGTACCTGCAAGTCCAGTTAGAATTTCGAGGAAACGCCCTAGATCCGAACCATTACAATTACCAGTATTACATCAATCTAGACTTCGAGCAACAAGAAGTCGTCCGCACGGTTCCTCCACCTATACTCCACCTCCGCTGTTAAACCCTACAAGATCTGGTCCTGGCTTATATTACGGATTAAAGTATAAATCTAACGACATTCGCGAAGACAGTTACAACTTCTGGAATAATGAATCCATTCCGGAATCTGATTCTACGCCTCATATTAACATAGGTCCACAGTTTCAATGTACCGTTCCTTCTTGCAAAAGAGGACTGCATCAAATAGATTACGATTCCAATAAAGAATTTTTGCTTTGGGGCCCGTCGGCAAGCAGTTATGTGGACAACGAAGTTGACATGTACTTGGATTTCGCCTGCTGCGCAGCAGTCCCTGGTGGAGGACGAAATAAGGAATATGCTATGCATCTCTTGCATATGTGCGGGGGAAACATTCATGATGCAATGTTGAAACTAATGCAACCATTTCCGGCTCTACCTCACGATCACCCTTTACTTTATTATCCATATAACGACAGTGACAAGTGGTTACCAGAAgaaatagatatttttcaaCAAGCGTTATTTCGATATGATAAAGATTTCTTTAGTATATCTCGGGAGATCACTACAAAAACAACTAAACAGTGCGTTCAGTTTTATTACGTTTGGAAGAAAGTTTGTGTGGACGAATATAGGCGGATTAAACTATCTAGAGAATCGAAGCGTGGACAAACGAAAGGATTCGAATCTGATTCTGACGACAAACCACATCCGGACGCAAAATTACTCGGAATTGCCGATGCTGAATCTCCGATTCCACTTCAAGAGCACAAAAACTTTATTTGCGAATTTTCGGATTGTTCAGCGAGCTTCAATTCGAAGGCTGCATTGAACGGCCACATAAGAATACATGGGGGAACTATTAGAAATTCTCCGACCCCATCTTCACTTTTAGAAAGGCGAACGGCGTCCACAACTCCTACATTGTGCCACATTGATTCTTCCGAAGACTATCCTTGTAAGATATGCGGGAAagTATTTTCCAAGATAAAGAGTCGGAGTGCACATATGAAGTCCCATAGACCCCCCGATGCCGAACCGGTTAGGAAAAGAGAAAAGGAACTTTCGTGTTCACCTAATTTTGATGTGTTTGTATCAAGTCCATTCAATACTTAG
- Protein Sequence
- MQTQQNLTSKTGNSASSSQAKVTTTTPNTTPIQSTNKTESKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKCEKKDVSGPPLQTASVSVRALIEEKIINKRITNPQGSGSGDEASRTSAPPLFPLTVHSSTNSNDLDSKITSFVVPAPPQQTTEKTRRHSDADAFTIPKHNNTQQEAEALADLILKKGKVSVKRTTSDPGQPSQVIQLQTGESLTLTGVTYQSEDGSGYFSQNIQDEVFTQVPDTMLLQSVDAQHLTSIQFQTDSLLHDQGEDQLQDIASLEDYASVTASLQDTVQSPTYQANHSVNQDLQAVLDSPLPESLAEFSTFHSASNLDIPSPGYQTQSPAQYNESPHASLTAQSPLQSPLVRHDSPGFAYPTPPASHEGQSPCFGQNTILPMVSPKQNDFNSVSGRDLDEPPQASSPLSAAFFTTTMSSSAAVEEALEEVLPGETISTDDIYPLSSSPTPQSPLSVGLTPVASPLSNIPTSAVSSPHPSTTYTPSPNNVTFPLSPHYSFQSQMMPNSDDPLLSSSPKDTKKKFEFNGLPLKVISSNGLLDLNSSNFTGILVDSNGELKLIQTNGNAIHTKNIVVTGTSLVHAQNIINKETDIKNGERTHKISPLLQCTNPTKQSPQSTRGCNDSNKHDGTDNVFISPTMVPASPVRISRKRPRSEPLQLPVLHQSRLRATRSRPHGSSTYTPPPLLNPTRSGPGLYYGLKYKSNDIREDSYNFWNNESIPESDSTPHINIGPQFQCTVPSCKRGLHQIDYDSNKEFLLWGPSASSYVDNEVDMYLDFACCAAVPGGGRNKEYAMHLLHMCGGNIHDAMLKLMQPFPALPHDHPLLYYPYNDSDKWLPEEIDIFQQALFRYDKDFFSISREITTKTTKQCVQFYYVWKKVCVDEYRRIKLSRESKRGQTKGFESDSDDKPHPDAKLLGIADAESPIPLQEHKNFICEFSDCSASFNSKAALNGHIRIHGGTIRNSPTPSSLLERRTASTTPTLCHIDSSEDYPCKICGKVFSKIKSRSAHMKSHRPPDAEPVRKREKELSCSPNFDVFVSSPFNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00838471;
- 90% Identity
- iTF_01295610;
- 80% Identity
- iTF_01295610;