Basic Information

Gene Symbol
Znf541
Assembly
GCA_036346205.1
Location
JARFJB010001080.1:1577164-1583679[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.6 4.5e+04 -1.8 0.0 5 20 180 195 176 196 0.87
2 2 2e-10 2e-06 31.3 0.1 2 46 852 896 851 896 0.96

Sequence Information

Coding Sequence
ATGGCGAACACGCAATCAAGTTTAACGAATAAAACCAGCACCAGTGTGTCGACCTCTCAATCAAAAGTCACGACAACAACACCAAATGCAACTCCTACTCTTTCTGCTAACAAAACAGAGTCAAAACCTGTGGAATGCAACTTATGtcacagaaaatttaaaaatatccctGCGTTAAATGGACATATGCGATTACACGGAGGATATTTTAAAAAGGATTCTGAAAAtaagaaatgtgaaaaaaagGATTCAGGTGGGCCTCCTCTACAAACTGCAAGTGTTAGTGTACGAGCTTTAAtagaagaaaaaattataaataagcgTAGCACCAACCCACCCTCTACAACAAGTAGCGAAGAATCGTCACGAACTGGTGCTCCTCCTCTCTTCCCTCTCACTGTGCATTCCTCAAATAATTCCAATGATTTGGATTCAAAAATTACTTCATTTGTTGTACCCGCACCACCTCAGCAATCAACAGAAAAAGTACGAAGGCATTCTGATGCAGATGCTTTCACAATACCAAAACAACCCAATACTCAACAAGAAGCTGAAGCATTAGCGGACCTTATtttgaaaaaaggaaaagtgGCCGTGAAAAGAACTACATCTGATCCCGGACAACCTACTCAACAAGTAATACAACTACAAACGGGTGAATCTCTAACTCTTACAGGTGTTACATATCAATCTGAAGATAGCTCGGGGTACTTTTCGCAAAGTCTACAAGACGAAGTATTTACTCAAGTTCAAGATACAATGTTATTACAAAGCGTAGATTCTCAACATTTAACTTCAATTCAATTTCAAGCGGACTCTCTTCTTCATGAACAAAGTGAAGATCAACTTCATGATATTGCTTCTCTAGAAGACTACGCTAGCGTGACAGCAAGTCTTCAAGAGACTGTACAATCGCCTTCATACCAATCAAACCACTCAGTTAATCAAGATTTACAGGCAGTGCTTGATTCTCCTCTACCCGAAAGTTTAGCGGAATTTAGCACATTTCACTCGGCCACTAACCTGGACATTCCATCTCCTGGATATCAAACCCAATCTCCAGCTCAATACACGGAATCTCCGCACACGTCCCTTACTGCACAATCTCCATTACAATCTCCTTTAATAAGACACGATTCTCCCGGGTTTGCTTATCCAACTCCACCTGCAAGTCACGAAGGCCAGAGTCCTTGTTTTGGACAGAATACAATGTTACCTATGGTCTCGCCTAAACAGAATGATTTTACGCAAGTCAGTGGAAGAGATTTGGATGAACCTCCACAAGCATCTTCTCCATTATCGGCTGCATTCTTTACATCAACAATGTCAAGTTCAGCTGCCGTAGAAGAAGCTTTAGAGGAAGTTCTTCCTGGAGAAAGCATATCAACGGATGATATTTATCCGCTTACAAATTCACCAACGCCTCAATCTCCACTTTCCGTTGGTCTTACACCAGTTGCTTCACCTTTATCAAATATACAAACCTCTTCTGTCTCGTCTCCACATCCTTCAACTACATATACTCCGTCCCCAAATAATGTAACGTTTCCATTATCTCCACACTATTCTTTTCAGTCTCAAATGATGCCAAATTCCGATGATCCTCTACTTTCAAGTAGTCCGAAAGACACTAAAAAGAAATTTGAATTCAACGGCCTTCCATTAAAAGTGATAAGCAGTAATGGACTGATAGATACGAATTTTACAGGAATTTTAGTTGAAAGTAACGGAGAATTAAAACTTGTACAAACAAATGGTAATGCATTACATGCTAAAAACATAGTTTTAACTGGTACTTCTTTGGTACAcgcacaaaattttttaaacaaagattTGCAGACAAAAAATGGCGAACGAATACAAAAAGTTATTCAAAGTCAATCAAACCTTCCTGTGAAGTATGCAGCACAAAGTAACAAAGGTTGCACTGAAAATTTTAGGCAAGATGGAACGGATGTTTTCATCAGCCCTACAACtGTACCTGCAAGTCCGGTAAGGACGTCCAGAAAACGACCTAGATCTGAACCGTTACAGCTTCCCATTCTTTATCAATCAAGACTACGTGCAACGAGAAGCAGACCACATGGGTCATCCATTTATACACCTCCACCTTTACTAAATCCTACAAGATCAGGATCAGGTTTATATTGTGGATTAAAAGCAAAATTAGTTAACGAAACACGAGAAGATTTTAATGTTTGGAATAATGAGTCAGTTCCAGAATCAGATTCAACTCCTCATATTAATATTGGATCTCAGTTTCAATCCAATTTACCACCTTGTAGGAAAGGAATAAATAGAGCTGATCAAGAACCCAATCATGAATATCTTTTATGGGGTCCTGCTGGTACTTACTCAGATAACGaagTTGACATGTACTTGGATTTCGCGTGCTGCGCAGCAGTTCCGGGTGGAGGACGAAATAAGGAGTATGCTATGCACCTTTTGCATATGTGTGGAGGGAACATTCATgagGCTATGTTGAAGTTGATGCATCCGTTTCCTGCGCTCCCTCTTGACCATCCTCTTCTTCATTATCAGTACAGTGATAGCGATAGATGGTCTCTCGAAGAAATAGAAGCATTTCAACATTCTCTTTTTAAATATGGCAAAGATTTTTTTAGCATATCGCGAGAGATTGGTTCAAAATCTACAAAACAATGTGTGCAATTTTATTACGTTTGGAAAAAAGTATGTGTTGATGAGTATAGACGAATAAAGATTTCAAGGGAATCTAAACGTGCGTATTCGAAAGGGTTTGAATCTGATTCAGACGAAAAACCACACGCTGATGTTAAACTGCTAGGCATTGCTGATGCTGAGTCACCTATTCCGTTTCAAGACCATAAAAACTTTATATGTGAATTTCCTGATTGCTCAGCTAGTTTCAATTCCAAAGCTGCACTAAATGGCCATATTAGAATTCATGGTGGTACTGTTAGGAATTCACCAACACCATCGACAGTACTAGAAAGACGAACAACATCCACAACACCTACTATGTGCCATACAGATTCTTCCGAAGACTATCCTTGCAAGATATGCGGGAAgGACATTGCTGCAGCTTGTAGGGTAAAGTATATAACGACGACTGACTTTTTAACATCCACGTGGATTCATCGATGCTCTGAAAATTACTGTATAGACAAAATTTCTGAGACGTCTTCTTCCAACTTCTCGGTTTTGGAAAGTTAA
Protein Sequence
MANTQSSLTNKTSTSVSTSQSKVTTTTPNATPTLSANKTESKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSENKKCEKKDSGGPPLQTASVSVRALIEEKIINKRSTNPPSTTSSEESSRTGAPPLFPLTVHSSNNSNDLDSKITSFVVPAPPQQSTEKVRRHSDADAFTIPKQPNTQQEAEALADLILKKGKVAVKRTTSDPGQPTQQVIQLQTGESLTLTGVTYQSEDSSGYFSQSLQDEVFTQVQDTMLLQSVDSQHLTSIQFQADSLLHEQSEDQLHDIASLEDYASVTASLQETVQSPSYQSNHSVNQDLQAVLDSPLPESLAEFSTFHSATNLDIPSPGYQTQSPAQYTESPHTSLTAQSPLQSPLIRHDSPGFAYPTPPASHEGQSPCFGQNTMLPMVSPKQNDFTQVSGRDLDEPPQASSPLSAAFFTSTMSSSAAVEEALEEVLPGESISTDDIYPLTNSPTPQSPLSVGLTPVASPLSNIQTSSVSSPHPSTTYTPSPNNVTFPLSPHYSFQSQMMPNSDDPLLSSSPKDTKKKFEFNGLPLKVISSNGLIDTNFTGILVESNGELKLVQTNGNALHAKNIVLTGTSLVHAQNFLNKDLQTKNGERIQKVIQSQSNLPVKYAAQSNKGCTENFRQDGTDVFISPTTVPASPVRTSRKRPRSEPLQLPILYQSRLRATRSRPHGSSIYTPPPLLNPTRSGSGLYCGLKAKLVNETREDFNVWNNESVPESDSTPHINIGSQFQSNLPPCRKGINRADQEPNHEYLLWGPAGTYSDNEVDMYLDFACCAAVPGGGRNKEYAMHLLHMCGGNIHEAMLKLMHPFPALPLDHPLLHYQYSDSDRWSLEEIEAFQHSLFKYGKDFFSISREIGSKSTKQCVQFYYVWKKVCVDEYRRIKISRESKRAYSKGFESDSDEKPHADVKLLGIADAESPIPFQDHKNFICEFPDCSASFNSKAALNGHIRIHGGTVRNSPTPSTVLERRTTSTTPTMCHTDSSEDYPCKICGKDIAAACRVKYITTTDFLTSTWIHRCSENYCIDKISETSSSNFSVLES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00838471;
90% Identity
iTF_01285095; iTF_01284454;
80% Identity
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