Hmis026269.1
Basic Information
- Insect
- Hypolimnas misippus
- Gene Symbol
- pnr
- Assembly
- GCA_008963455.1
- Location
- JBBEEQ010000032.1:16601421-16608940[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-18 2.8e-14 53.2 4.1 1 35 72 105 72 106 0.97 2 2 3.2e-18 1.3e-14 54.3 6.0 1 34 126 158 126 160 0.98
Sequence Information
- Coding Sequence
- ATGGATAGCCCTCTCTCGCAAGCGTGGCTGCAGAACATCGCCTTACTAGCAGCGGGCGGCAGCGGCGTGGGCGCCGTCGGTGGAGTCGGCTCGGTGGCCGGCGGCCTGTATGGCCAGAACATGGTGATGGGCTCCTGGTGCGCGCCGTACGATGCTCTGCAGCGACCGCCCGCGTATGATGGCGTGCTGGAGGCGTACGAGGAGGGCCGCGAGTGCGTGAACTGCGGCGCCAACAATACGCCGCTGTGGCGCCGCGACTCGACCGGCCACTACCTCTGCAACGCCTGCGGCCTCTACCACAAGATCAACGGCGTCAACCGCCCGCTCGTGAAGCCGAGCAAGCGGCTGTCGGCAGCGCGGCGGCACGGGCAGTGCTGCACCAACTGCGGCTCGCGCAACACGACGCTGTGGCGCCGCAACAACGACGGCGAGCCGGTGTGCAACGCCTGCGGGCTCTACTACAAGCTGCACGGCATCAACAGACCCCTGGCGATGAGGAAAGATGGAATTCAAACGAGGAAGCGAAAGCCGAAGAAATCATCGAATGGTGTGAAGCCCCCTCAAGAAGCTGCCAAGAAAGACGGCCAGAACTCGCCCAGTATTGACGAGAGCAAGCCCAGCATAGCGGAGGTGCCGTTGCCGCTGACCGCGACGATGTCGGGTCACGCCGCCAGCAAGAACCCGCGCGAGGCGGTCGGGCCCACGCCCTCCCCGCACGCGCACGCTCATGCGCACACacacgcgcacgcgcacgcgcagAACTCGCAGTACCCGCTGGGCATCCCCTCCGCACCCGCCTTCCTCTCCAACCCCTCGCTCTTCAACATCAAGAGCGAGCCCAACGCCGCCACCGGCTACGAGGGCTACGGCTCCCATGCCAGCTCGAATGGACCTTATCATTCACAACAGCATTACTTGCATGCGTTACAgTATGGATTAAGCAATGGCGAAGAAGAGGAAGGCAGCGGTTTCCTACACCAGCGCAACGTGACCGCGCACGCCAAGCTCATGGCCTCCACGTAG
- Protein Sequence
- MDSPLSQAWLQNIALLAAGGSGVGAVGGVGSVAGGLYGQNMVMGSWCAPYDALQRPPAYDGVLEAYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSSNGVKPPQEAAKKDGQNSPSIDESKPSIAEVPLPLTATMSGHAASKNPREAVGPTPSPHAHAHAHTHAHAHAQNSQYPLGIPSAPAFLSNPSLFNIKSEPNAATGYEGYGSHASSNGPYHSQQHYLHALQYGLSNGEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00796988; iTF_00752607; iTF_00802497; iTF_01021889; iTF_00354754; iTF_00778466; iTF_00214083; iTF_00247704; iTF_00458531; iTF_01018246; iTF_00783085; iTF_00457678; iTF_00696176; iTF_00621685; iTF_00985654; iTF_00986805; iTF_01194038; iTF_00213080; iTF_00780706; iTF_00782306; iTF_00776465; iTF_00777681; iTF_00775730; iTF_00774932; iTF_00779935; iTF_00160338; iTF_00248594; iTF_00723634; iTF_01508536; iTF_01079522; iTF_00843978; iTF_00897454; iTF_01506836; iTF_01507733; iTF_01081207; iTF_01080379; iTF_00779193; iTF_00781483; iTF_01562425; iTF_00787291; iTF_00926254; iTF_00353724; iTF_01182333;
- 90% Identity
- iTF_01079522; iTF_01507733; iTF_00843978; iTF_01506836; iTF_00985654; iTF_00986805; iTF_01508536; iTF_00796988;
- 80% Identity
- -