Npol007813.1
Basic Information
- Insect
- Nymphalis polychloros
- Gene Symbol
- pnr
- Assembly
- GCA_905220585.1
- Location
- HG992246.1:15619241-15625078[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-18 2.2e-14 53.2 4.1 1 35 71 104 71 105 0.97 2 2 2.7e-18 9.9e-15 54.4 6.0 1 34 139 171 139 173 0.98
Sequence Information
- Coding Sequence
- ATGGATAACCCCCTCTCACAGACCTGGCTGCAGAATATTGCGATACTTGCAGGCGGCAGCGGTGTGGGTGCCGTTGGCGGCGTCGGCTCGGTGGCCGGCGGGCTGTACGGGCAGAACATGGTGATGGGCTCCTGGTGCGCGCCCTACGACGCTCTGCAAAGACCACCCGCATACGATGGCGTACTGGAGGCGTACGAGGAGGGCCGTGAGTGCGTGAACTGTGGTGCCAACAACACGCCGCTGTGGCGTCGAGATTCCACGGGCCACTACCTTTGCAACGCTTGCGGCCTGTATCACAAGATCAACGGCGTCAACCGCCCGCTCGTGAAACCGAGCAAGCGGCTGAGATGGATGAGTGTGGAGGGCATGGCCAGGGGCATGAAGAAGTCGGCAGCGAGACGACACGGGCAGTGCTGCACGAACTGCGGCTCGCGGAACACGACGCTGTGGCGACGCAACAACGATGGAGAGCCGGTCTGCAACGCCTGCGGACTCTATTACAAGCTGCACGGCATTAACAGACCCCTGGCGATGCGAAAAGATGGAATACAAACGCGAAAACGGAAGCCGAAGAAGTCATCGAACGGTGTAAAACCTCCGCAAGAAACTGCTAAGAAAGATGGTCAGAATTCGCCGGGTATCGACGAGAGTAAACCCAGTATAGCAGAAGTGCCGCTGCCACTTACAGCAACAATGTCGGGCCACGCCGCCGCCGGGAAATGCGCGCGCGAGGCGTACCCGTTAGCAATCCCCTCCGCACCCGCCTTTCTGTCCAACCCCGCGCTCTTCAACATCAAGAGCGAACCCAACGCCGCAACGAGCTATGAAGGCTACGGTTCCCACACTAGCTCGAATGGACCTTACCATTCGCAACAGCACTATTTGCATGCACTACAGTATGGATTAAGCAATGGCGAAGAAGAGGAAGGTAGTGGATTCTTACATCAACGTAATGTGACCGCGCACGCAAAACTAATGGCCTCAACGTAG
- Protein Sequence
- MDNPLSQTWLQNIAILAGGSGVGAVGGVGSVAGGLYGQNMVMGSWCAPYDALQRPPAYDGVLEAYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLRWMSVEGMARGMKKSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSSNGVKPPQETAKKDGQNSPGIDESKPSIAEVPLPLTATMSGHAAAGKCAREAYPLAIPSAPAFLSNPALFNIKSEPNAATSYEGYGSHTSSNGPYHSQQHYLHALQYGLSNGEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00825243;
- 90% Identity
- iTF_01081207;
- 80% Identity
- -