Psen017850.1
Basic Information
- Insect
- Phoebis sennae
- Gene Symbol
- pnr
- Assembly
- GCA_001586405.1
- Location
- LQNK01000057.1:146085-158539[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-18 2e-14 53.0 4.1 1 35 108 141 108 142 0.97 2 2 3.6e-18 8.7e-15 54.1 6.0 1 34 162 194 162 196 0.98
Sequence Information
- Coding Sequence
- ATGTTCGGCGGCGGCAGCGGCGGCTCGTACAGCGGCGACTGCGGCGAGGGCTACGGGCTGGGCTACGTGGGCAACGGCCGCCTGCAGCAGTACGCCGCGCACTTCGCGCCGCACCAGAGCTGGCACCACGCGCCGCACCACGACACCTACGCTAACGTAGCATGTGTTGCAGGTGGCGGCAGCGTGGGCGGCGTGGGCTCGGTGGCCGGCGGGCTTTACGGCCAGAACATGGTGATGGGCTCCTGGTGCGCGCCCTACGACGCCCTGCAGAGACCGCCCGCGTATGATGGCGTGCTGGAGGCGTACGAGGAGGGCCGCGAGTGCGTCAACTGCGGCGCCAACAACACGCCGCTGTGGCGCCGCGACTCCACCGGCCACTACCTCTGCAACGCGTGCGGCCTGTACCACAAGATCAACGGGGTTAACCGCCCGCTCGTTAAACCCAGCAAGCGGCTGTCGGCGGCGCGGCGGCACGGGCAGTGCTGCACCAACTGCGGCTCGCGCAACACCACGCTGTGGCGCCGCAACAACGACGGCGAGCCCGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACGGCATCAACCGACCACTAGCTATGAGGAAGGACGGCATCCAAACCAGGAAGAGAAAGCCCAAGAAGTCGGCGAACGGCACCAAGCCCGCGCAGGACACGCCCAAGAAAGACGGACAAGGCTCTCCCGGCATGGATGACAGCAAGTCGAGTATATCGGAGATGCCGCTTCCGCTGACGGCGTCGATGTCCCACTCCAAGCCGCGCACGGAGGCCATGCCGCCGAGCGCGTCGCCGCACGCACACACGCACGCGCACACGCACGCGCACGCACACGGCCACGCGCAGGGCCACGCGCAGCAGTACCCGCTGGTGGCGTCGGGCACGGCCTTCCTGTCCACGCCGTCGCTGTTCAACATCAAGAGCGAGCCCAGCGCGCCCGCGCCCTACGAGGGCTACTCGCACTCCAACGCGCCCTATCACTCCCAACAACATTATTTACACGCGCTACAGTACGGTTTGGGCAACGGTGAGGAGGAGGAGGGCAGCGGTTTCCTGCACCAGCGCAACGTGACGGCGCACGCCAAGCTCATGGCGTCGACGTAG
- Protein Sequence
- MFGGGSGGSYSGDCGEGYGLGYVGNGRLQQYAAHFAPHQSWHHAPHHDTYANVACVAGGGSVGGVGSVAGGLYGQNMVMGSWCAPYDALQRPPAYDGVLEAYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSANGTKPAQDTPKKDGQGSPGMDDSKSSISEMPLPLTASMSHSKPRTEAMPPSASPHAHTHAHTHAHAHGHAQGHAQQYPLVASGTAFLSTPSLFNIKSEPSAPAPYEGYSHSNAPYHSQQHYLHALQYGLGNGEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00825243;
- 90% Identity
- -
- 80% Identity
- -