Lcam002337.1
Basic Information
- Insect
- Limenitis camilla
- Gene Symbol
- pnr
- Assembly
- GCA_905147385.1
- Location
- LR990233.1:239976-252232[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-18 2.2e-14 53.4 3.8 1 35 104 137 104 138 0.97 2 2 3.6e-18 1.3e-14 54.1 6.0 1 34 158 190 158 192 0.98
Sequence Information
- Coding Sequence
- ATGTTCGGGGGCAACAGCGGCGCGTACGGGGGCGAATGCGCGGAGGGGTACGGGCTGGGCTACGTGGCGGGGGGCAGCCGCCTGCAGCAGTACGCGCACTTCGCGCCGCACCAGACCTGGCACCACCACGCGCACCACGACACCTACGCAGGTGGCAGCAGCGTGGGCGGTGTGGGCGGCGTGGGCGGCGTGGCGGGCGGGCTGTACGGGCAGAACATGGTGATGAGCTCCTGGTGCGCCCCCTACGACGCGCTGCAGCGCCCCCCGGCCTACGATGGAGTGCTGGAGGGGTACGAGGAGGGCCGCGAGTGCGTCAACTGCGGCGCCAACAACACCCCGCTGTGGAGGCGCGACGCCACCGGGCACTACCTCTGCAACGCGTGCGGCCTCTACCACAAGATCAACGGCGTCAACCGACCGCTCGTGAAGCCGAGCAAGCGGCTGTCCGCCGCACGACGTCACGGCCAATGCTGCACCAACTGCGGCTCGCGGAACACGACGCTTTGGCGACGTAACAACGACGGGGAACCAGTGTGCAACGCCTGTGGCCTCTACTATAAACTACACGGGATCAATAGGCCGCTAGCGATGAGGAAAGATGGAATCCAAACGAGGAAACGAAAGCCGAAGAAGTCTTCCAACGGCGTGAAGCCTCCGCAGGAGACGCCTAAAAAGGATGGGCAGAACTCTCCTGGTATTGATGAAAGCAAGCCCAGCATAGCCGAAGTACCACTACCACTAACAGCGTCAATGGCGCATAAGCCCACGCGAGAGGGCCCAACTCCCTCGCCTCAGACTCACATGCACAGCCACTCTCATGGCCATGGCCACAGCCACGGCCAGAACAACCAGTACCCGCCACTGGGCATCCAGACGCCAGCCTTCCTGTCGAACCCCTCGCTGTTCAATATCAAGAGCGAGCCCAACTCCGCGGCTGGGTACGAGGGCTACGCGTCGCATGCCAGTGGGAATGGGCCGTACCACTCGCAGCAGCATTACATACACGCTCTACAACATTATGGTCTGAGCAACGGTGAAGAAGAGGAGGGTAGCGGGTTCCTGCACCAGCGCAACGTGACCGCTCACGCCAAGCTGATGGCCTCCACGTAG
- Protein Sequence
- MFGGNSGAYGGECAEGYGLGYVAGGSRLQQYAHFAPHQTWHHHAHHDTYAGGSSVGGVGGVGGVAGGLYGQNMVMSSWCAPYDALQRPPAYDGVLEGYEEGRECVNCGANNTPLWRRDATGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSSNGVKPPQETPKKDGQNSPGIDESKPSIAEVPLPLTASMAHKPTREGPTPSPQTHMHSHSHGHGHSHGQNNQYPPLGIQTPAFLSNPSLFNIKSEPNSAAGYEGYASHASGNGPYHSQQHYIHALQHYGLSNGEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00825243;
- 90% Identity
- iTF_00621685;
- 80% Identity
- -