Hmis008620.1
Basic Information
- Insect
- Hypolimnas misippus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_008963455.1
- Location
- JBBEEQ010000009.1:8217614-8241061[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-14 7.5e-12 45.5 0.0 1 39 156 195 156 200 0.93 2 2 2.6e-18 1.2e-15 57.7 0.0 1 43 365 408 365 410 0.95
Sequence Information
- Coding Sequence
- ATGGCGGCCGAGGACGAGCAAACATGGCGGTCGTGGGAACCGAGTCCCGCGTCAGAGTCAGACAGCAGTTCTGTGTCGGGGGCGAAGAGTCCGGCTGGACCGCCACTGCTGCATCACCTCCTACAGCTACAGAACCAGAACCCTCAGGCCATTGCACAGTTCCAGCAGATGATCGCGGCGCTGACGGCGCTGGGCACGGGGCTGATCCCGCCGGCGCTCTCGCAGGCCTGGATGATGCAGCGGCTGGCGACAGCGAGACCGCAAACTGAGAGGCTATCAGAAAGCGATAAGGTAGCGGCTCCCAGCTCGTCCCCCACCGTCACGGAACAGCCCCTGGACCTCAGCGCCAAGTCCACCTCCAGCACCAGCGGCACCCCGCCCCCTGACGCTAAGAACCTGGATAACGCCAGATTAAAACGTGCTGTTCTTGAAGGATCAAGTAATAGCGCCACGAGACGCGCCTACACGGAGGATGAGTTGCAATCAGCGCTGCGGGACATCCAGTCCGGCCGGCTCGGCACCCGGCGGGCCGCCGTCGTCTACGGCATCCCGCGCTCCACGCTCCGGAACAAGGTCAACAAGTTCGGACTCACGACCGACACCGGCCAGGAGTCCGACCAGGACAGCGAGCCCGACAAGCCGGAGTCGCCCCCGTCCGTCATCCTCAAGATACCGACCTTCCCGCCGCCCGACGAGAAGAGCCCCTCACCGGCGACGCCCGTCACCACGCCGGTCACGCCCATCACGCCGATCCTGCCGCCGCAGCCGCCGCTCAACGCGACTTCGCTCCTACTCCCGCCGTCGGTTTTCGCGGATCCACCCTCGAGTCAGCATCTCTTCACGTCGCTCAGTGACGTAATAGCGAAAAGCATCAGCCAAAAGTTCCAGCAGCCCTTAGATAGACCGCCACAGGCGTCTGATTTACCGTTCATGCGAGCGCCCGACAGACACGTGTCCGTCATAAAGACGCCGCCCGACAACCAGAGGAACTACGCGATGCCCAGCAATTCGAAGGCGATGCCGAACAACAACGGGCAGCCGGCAACCGGCGGCAAGGGGACGAGACCCAAGCGAGGGAAATACAGAAATTACGACAGAGACAGCCTCGTCGAAGCCGTGAAAGCGGTGCAGCGAGGCGAGATGTCCGTGCACCGTGCCGGCTCCTACTACGGCGTCCCGCACTCCACGCTGGAGTACAAAGTGAAGGAGCGGCATCTGATGCGGCCTCGGAAAAGAGAGCCGAAGCCGCAGCAGGACATAAAGCCGCAACCTAAACCGCCTCCGAAGCCGGCTACGAAGCCGTTCACGAACGGCTTAAACGGCCCCGAGAGCGGCTACCCAAGCGGCTATCCGTTCTGGCCGGGCGCCGGCttcgcgccgcccgcgccggaCCTGTACGCGTCGCACATGATGCGCCGGCTGCGGGAGGAGGCACCGCCGGCGAACGGGTCGTTCCTCGAAGGGATCATCCGGTCGAGCCTCGAGCGGCCTGGTGCGGCGCTGCTGCAGCGGCTGAACGACGAGCGGCGGAGTGATGAGCCGCCGGCGCGTCGGCCGCGGCTCGAGTCCGACCACCAGCTGGCGGTCGACATGCGCGAGGCGGTGCAGCGGCTGCGAGCGGACAAGCTGCGACCGCGCAACGGCACGCCCACTCCCCCCACATCGCCGACAGGGGAGCGCGCCTAG
- Protein Sequence
- MAAEDEQTWRSWEPSPASESDSSSVSGAKSPAGPPLLHHLLQLQNQNPQAIAQFQQMIAALTALGTGLIPPALSQAWMMQRLATARPQTERLSESDKVAAPSSSPTVTEQPLDLSAKSTSSTSGTPPPDAKNLDNARLKRAVLEGSSNSATRRAYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLTTDTGQESDQDSEPDKPESPPSVILKIPTFPPPDEKSPSPATPVTTPVTPITPILPPQPPLNATSLLLPPSVFADPPSSQHLFTSLSDVIAKSISQKFQQPLDRPPQASDLPFMRAPDRHVSVIKTPPDNQRNYAMPSNSKAMPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDIKPQPKPPPKPATKPFTNGLNGPESGYPSGYPFWPGAGFAPPAPDLYASHMMRRLREEAPPANGSFLEGIIRSSLERPGAALLQRLNDERRSDEPPARRPRLESDHQLAVDMREAVQRLRADKLRPRNGTPTPPTSPTGERA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01078124;
- 90% Identity
- iTF_01507988; iTF_01079817; iTF_01078995; iTF_01507092; iTF_01506263; iTF_01078124; iTF_00843417;
- 80% Identity
- -