g11586.t1
Basic Information
- Insect
- Nymphalis c-album
- Gene Symbol
- Mblk-1
- Assembly
- GCA_905332345.1
- Location
- CAJOBY010000020.1:6041769-6069276[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-15 5.3e-12 45.7 0.0 1 39 156 195 156 200 0.93 2 2 8e-19 8e-16 57.9 0.0 1 43 365 408 365 410 0.95
Sequence Information
- Coding Sequence
- ATGGCGGCCGAGGACGAGCAAACATGGCGGTCGTGGGAACCGAGTCCCGCGTCAGAATCAGACAGCAGTTCTGTGTCGGGAGCGAAGAGTCCAGCCGGACCACCGCTGCTGCATCACCTTCTGCAACTGCAGAACCAGAATCCCCAAGCGATCGCACAGTTCCAGCAGATGATTGCTGCACTGACGGCGCTGGGGACGGGGCTGATACCGCCGGCGCTGTCGCAGGCCTGGATGATGCAGCGGCTGGCGACGGCGAGACCGCAGACTGAGAGGCTATCAGAAAGCGACAAGGTAGCAGCCCCCAGCTCGTCCCCCACCGTCGCGGAACAGCCCCTTGATCTGAGCGCCAAGTCCACGTCCAGCACCAGCGGTACACCGCCTCCCGACGCCAAGAATCTGGATAACGCCAGATTAAAACGTGCAGTCCTCGAAGGAACCAGTAATAGCACTACGAGACGTGCCTACACGGAAGATGAGCTGCAATCAGCTCTGCGGGATATACAATCCGGCCGGCTGGGCACCCGCCGCGCCGCCGTCGTCTACGGCATCCCGCGGTCCACGCTTCGCAACAAGGTCAACAAGTTCGGGCTCATGTCCGACACTGGCCAGGAGTCGGACCCGGACAGCGAGCCCGACAAACCGGAGTCGCCCCCGTCCGTTATCCTCAAGATACCGACGTTCCCGCCCCCCGATGACAAGAGCCCTTCACCGGCGACCCCCGTCACGACGCCTGTCACGCCTATCACGCCGATCCTACCGCCGCAGCCGCCGCTCAATGCAACCTCGCTGTTACTTCCGCCCTCGGTCTACGCAGATGCTCCCTCCAGTCAGCATCTTTTTACGTCGCTGAGTGACGTCATAGCGAAAAGTATCAGCCAAAAGTTCCAGCAGCCTCTCGATAGGCCGCCGCAGGCGTCGGACCTGCAGTTCATGCGAGCGCCCGACAGACACGTGTCCGTGATAAAAACTCCACCCGATAACCAGAGGAACTACGCGATGCCGAGCAATTCCAAGGCGACGCCCAACAACAACGGGCAGCCGGCGACCGGCGGGAAGGGCACGAGGCCCAAGCGAGGAAAGTATCGCAACTACGACAGAGATAGTCTCGTGGAGGCCGTGAAAGCGGTGCAGCGAGGCGAGATGTCGGTACACCGCGCCGGCTCCTACTACGGAGTACCTCACTCCACACTGGAGTACAAGGTGAAGGAGCGACATCTCATGCGACCCAGGAAGAGGGAGCCGAAGCCGCAGCAAGACGTCAAACCTCAGCCACCGAAACCTGCCCCGAAGCCCCCGACGAAACCCTTCACGAACGGGCTCAACGGCCCCGAGAGCGGCGGCTACCCGGCCGGTTACCCGTTCTGGCCGGGTGCCGGGCAAAGCGACACGGCACGCGTATCGCGCTATGTGAAAATGACACAGCGTGACAccgtgtcccttgtgcctccgGTCGTAGAGCGGATAGGATGA
- Protein Sequence
- MAAEDEQTWRSWEPSPASESDSSSVSGAKSPAGPPLLHHLLQLQNQNPQAIAQFQQMIAALTALGTGLIPPALSQAWMMQRLATARPQTERLSESDKVAAPSSSPTVAEQPLDLSAKSTSSTSGTPPPDAKNLDNARLKRAVLEGTSNSTTRRAYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLMSDTGQESDPDSEPDKPESPPSVILKIPTFPPPDDKSPSPATPVTTPVTPITPILPPQPPLNATSLLLPPSVYADAPSSQHLFTSLSDVIAKSISQKFQQPLDRPPQASDLQFMRAPDRHVSVIKTPPDNQRNYAMPSNSKATPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDVKPQPPKPAPKPPTKPFTNGLNGPESGGYPAGYPFWPGAGQSDTARVSRYVKMTQRDTVSLVPPVVERIG*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00985910; iTF_00824631;
- 90% Identity
- iTF_00824631;
- 80% Identity
- -