Vtam016225.2
Basic Information
- Insect
- Vanessa tameamea
- Gene Symbol
- Mblk-1
- Assembly
- GCA_037043105.1
- Location
- CM073299.1:7045355-7066353[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.1e-15 6.7e-12 45.4 0.0 1 39 164 203 164 208 0.93 2 2 1.1e-18 1e-15 57.6 0.0 1 43 373 416 373 418 0.95
Sequence Information
- Coding Sequence
- ATGGCGGCCGAGGACGAGCAAACATGGCGGTCGTGGGAACCGAGTCCCGCGTCAGAATCAGACAGCAGTTCTGTGTCGGGGGCGAAGAGTCCAGCTGGACCACCGCTGCTCCATCACCTTCTGCAACTACAGAACCAGAATCCCCAAGCGATCGCACAGGCGTACACGGAGATGTGTGTGCAGTTCCAGCAGATGATAGCGGCTCTGACGGCGCTGGGGACGGGGCTGATACCGCCGGCGCTGTCGCAGGCCTGGATGATGCAGCGGTTGGCGACGGCAAGACCGCAGACTGAGAGGCTATCAGAAAGCGACAAGGTAGCAGCCCCCAGCTCGTCCCCTACCGTCGCGGAACAGCCCCTGGATCTGAGCGCCAAGTCTACGTCCAGCACCAGCGGTACGCCGCCTCCCGACGCCAAGAATCTGGATAACGCCAGATTAAAACGCGCAGTCCTCGAAGGAACCAGTAATAGCACTACGAGACGAGCGTACACGGAAGATGAGTTGCAATCAGCTCTGCGGGATATCCAATCCGGCCGGCTGGGCACCCGCCGAGCCGCTGTCGTCTACGGTATCCCGCGCTCCACGCTCCGCAACAAGGTCAACAAGTTCGGGCTCATGTCCGATACCGGCCAGGAGTCCGACCCGGACAGCGAGCCCGATAAACCGGAGTCGCCCCCGTCCGTTATCCTCAAGATACCGACATTCCCGCCCCCTGACGAGAAGAGCCCCTCACCGGCAACGCCCGTCACAACGCCGGTCACGCCTATCACGCCGATCCTACCGCCGCAGCCGCCGCTCAATGCAACCTCGCTCTTACTTCCACCATCGGTCTACGCAGACGCACCCTCCAGTCAGCATCTCTTTACGTCGCTGAGTGACGTAATAGCGAAAAGTATCAGCCAAAAGTTCCAGCAACCTCTCGATAGACCGCCGCAGGCCTCGGACCTGCAATTCATGCGAGCGCCCGACAGGCACGTGTCTGTGATAAAAACTCCACCCGATAACCAGAGGAACTACGCGATGCCAAGTAATTCCAAGGCGACGCCCAACAACAATGGGCAGCCCGCGACCGGCGGAAAGGGTACGAGACCCAAACGAGGAAAGTACCGAAACTACGACAGAGACAGTTTGGTGGAGGCCGTGAAAGCGGTGCAGCGAGGCGAGATGTCGGTACACCGCGCCGGCTCCTACTACGGCGTACCTCACTCCACACTGGAGTACAAGGTGAAGGAGCGGCATCTCATGCGACCCAGAAAGAGGGAGCCGAAGCCGCAGCAGGACGTAAAACCGCAGCCACCGAAGCCTCCCCCGAAGCCCCCGACGAAGCCCTTCACGAACGGCCTCAACGGCCCCGAGAGCGGCGGCTACCCGGCCGGGTACCCGTTCTGGCCGGGTGCCGGGTTCGCGCCGCCACCGACGCCCGACCTGTACGCGTCGCACATGATGCGACGCCTGCGCGAGGAAGCCCCGCCGCCGGCCAACGGCTCGTTCCTCGAGGGCATCATCCGCTCGAGCCTCGAGCGGCCCGGCGCGGCGCTGCTGCAGCGACTGAGCGGCGCGCCCGCGTCCCCGCCGGGCGCGGGCGCGCTGCGGCGGCGCGGCGAGCCCGGCGACGAGCCggccgcgcgccgcccgcgcctcGACTCGGACCACCAGCTGGCGGCCGACATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCCCACGCCGCCGCCCGCGGCGTCGCCGGCGGGGGCGGGCGCGGGGGAGCGCGCCTAG
- Protein Sequence
- MAAEDEQTWRSWEPSPASESDSSSVSGAKSPAGPPLLHHLLQLQNQNPQAIAQAYTEMCVQFQQMIAALTALGTGLIPPALSQAWMMQRLATARPQTERLSESDKVAAPSSSPTVAEQPLDLSAKSTSSTSGTPPPDAKNLDNARLKRAVLEGTSNSTTRRAYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLMSDTGQESDPDSEPDKPESPPSVILKIPTFPPPDEKSPSPATPVTTPVTPITPILPPQPPLNATSLLLPPSVYADAPSSQHLFTSLSDVIAKSISQKFQQPLDRPPQASDLQFMRAPDRHVSVIKTPPDNQRNYAMPSNSKATPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDVKPQPPKPPPKPPTKPFTNGLNGPESGGYPAGYPFWPGAGFAPPPTPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLSGAPASPPGAGALRRRGEPGDEPAARRPRLDSDHQLAADMREAVQRLRADKLRPRNGTPTPPPAASPAGAGAGERA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01078995;
- 90% Identity
- iTF_00824631;
- 80% Identity
- iTF_01506263;