Hmis025921.1
Basic Information
- Insect
- Hypolimnas misippus
- Gene Symbol
- e2f7
- Assembly
- GCA_008963455.1
- Location
- JBBEEQ010000032.1:10061157-10062408[-]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.6e-23 5.2e-19 68.5 0.0 1 65 53 119 53 119 0.94 2 3 1.8 1.4e+04 -3.4 0.0 11 29 125 142 124 143 0.65 3 3 5.1e-17 4e-13 49.7 0.1 1 64 154 244 154 245 0.90
Sequence Information
- Coding Sequence
- ATGTATGAAGATGATAACATTACTTCTACTCCTAAGCGTTATGCCTTAACTGAGGTCACCAATGCAACAAGCTATGTGTCGCCAACTGCTAATCTAAAGTTATTGACCAATGTCGCCTTGCAATATCCCACGCCGCCTCCGAGCACAGTGCATCGCAAAGAAAAATCCTTACAAATACTATGTGATAAatttCTTAACTTGTATCCTCTACATGGAAATGGTACAGTCGAAATACAGTTGGATAGCACCGCAGCCAGGTTAGGGGTAGAAAAACGGAGAATgtacgatataataaatattctagAGGCCATGCAATGTGCAGTTCATAAAAGGAAGAACACATACTTATGGCATGGTGGATCCAGACTgaattcctttttaaaaatgttaaaaaaacaaggagaaaacCTAAGGCTCTCTGAGGCCCTGAGAGGAAGAGCAGCCAAGCCACCGGCTCCAAAACATAAGACTCTTGGGGTGCTTGCTCAAAGATTTTTGATGCTTTTTTTAGTGGAGCCCCCTAACACTCTTATCAATTTAGAAATGGCTGTAAGTGTACTTATCGACTCATCAAATAAGAATAAATCAACCCTCTCTCCAGAGCAGTTGGATCGACAACACAAGTCCAAAGTGAGAAGACTTTATGATATtgcaaatgtatttatttcaattggtCTCATTGAAAAGGTATcaggtaatttaatattaaaaaagccaGTATTTAAGTATGTTGGGCCTTTTAAGATGAAAAAATCAGACAAAGTAGTGCTGCCTACACTATCACCCATCACGCCTCTTTCAGTATTAGACACACAGCAACAAATGACACCTTGTCATGTGTTTGCTGGGAAGTCTAAACGGAAATTAGAGTTTACAACACCAAGTACAGATAAGCTTGGTGTTACGACCCCACCTCATACTCCGTCACACAAGTGGGATGAAATTTTACTTGTCGCTGACATGGAACTGAATAGAATTAACAATGGAATTACAGTGTAA
- Protein Sequence
- MYEDDNITSTPKRYALTEVTNATSYVSPTANLKLLTNVALQYPTPPPSTVHRKEKSLQILCDKFLNLYPLHGNGTVEIQLDSTAARLGVEKRRMYDIINILEAMQCAVHKRKNTYLWHGGSRLNSFLKMLKKQGENLRLSEALRGRAAKPPAPKHKTLGVLAQRFLMLFLVEPPNTLINLEMAVSVLIDSSNKNKSTLSPEQLDRQHKSKVRRLYDIANVFISIGLIEKVSGNLILKKPVFKYVGPFKMKKSDKVVLPTLSPITPLSVLDTQQQMTPCHVFAGKSKRKLEFTTPSTDKLGVTTPPHTPSHKWDEILLVADMELNRINNGITV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00967840;
- 90% Identity
- iTF_00782433; iTF_01181697; iTF_00777797; iTF_00775849; iTF_00457805; iTF_00457038; iTF_00722831; iTF_00779311; iTF_00781616; iTF_00775057; iTF_00777234; iTF_00621014; iTF_00778585; iTF_00247834; iTF_00780058; iTF_00776573; iTF_00246975; iTF_00774303; iTF_00780832; iTF_00695269; iTF_01077980; iTF_01079686; iTF_01080522; iTF_01506958; iTF_01507857; iTF_01078866; iTF_01506131; iTF_00843294; iTF_00958498; iTF_00959204; iTF_00959960; iTF_01158508; iTF_00204165; iTF_01153646; iTF_01156078; iTF_01157460; iTF_01154809; iTF_01337565; iTF_00984820; iTF_00985789; iTF_00942601; iTF_01034324; iTF_01033512; iTF_00896565; iTF_00212218; iTF_00159621; iTF_00213209; iTF_00796316; iTF_00418761; iTF_00461348; iTF_00842440; iTF_00420338; iTF_00421141; iTF_00419577;
- 80% Identity
- -