Hscr032082.1
Basic Information
- Insect
- Hypercompe scribonia
- Gene Symbol
- -
- Assembly
- GCA_949316085.1
- Location
- OX438994.1:10015902-10016897[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.8e-10 2.5e-07 31.3 0.0 1 38 8 46 8 51 0.93
Sequence Information
- Coding Sequence
- ATGCCGAAGATACCCCAATATACAAAAGAGGCCCTTGAGGAGGCTCTAGAAAAAGTGAACACAAAAACCATGTCATTAAGAGctacagcaaaaaaatataatatacctagAGGTACCTTACAGTTCAAACTTAAAAATCCTACTTCGAAATCCCAATTCGGACCGACACCGTATTTGACATATGAAGAAGAAAATACGATCGCAGAGTGGTTGATTAAAATGGCCCGTAAAGGCTTTCCTAGAAAGTCAGATGATGTTCTCGACACTGTTCAAAAATTTCTAACTGATAATCCACGCGATACCCCTTTTGTCAATAATCGGCCTGGTCCGGGATGGCTGAAAGCTTTTTTAAAACGTCACCCTAGTTTAGTTAAAAGAACCAGCGAGGAAGTAACTAAAGCCAGTGCCTGCGTGTCTGAAGCGGACATAAAGAAATGGTTTCTTGAAATAAGAAACTACTTGACAAGTGAAAACTTGTTAGATGCAATTCAGGATCCAAAGCGTGTGTTTAATGCTGACGAGACAGGATTTCAGCTGTGTCCTTCTACTGGTCGCGTACTTGCTGCTAAAGGagacaaaaatgtttattctgtGGAACTTGGAAACTCTAAAGAAAATGTTACGGTACTATTTACATTTTCCGCTGATGGCAAAACTTGTCCTCCATTAATTGTATTTCCTTACAAACGACTGCCTGAAAAAATTGCGACATCAGTGCCACCTAAATGGGGTATCGGACGCAGTGATTCAGGGTGGATGACGGCAGATGTTTTCAACCAGTTTATCACTGAAATATTTGATCCATATCTTACTGAAAGCAACATCAAAAGACCAGTTATTCTATTTATAGATGGTCACAAAAGCCATATCACTTTGCAGCTTAGTTTGACTTGTAAAGAGTTAGGAATTGAACTAGTTGCTCTTTACCCCAACACTACCCGCATCACTCAGCCAGCAGATGTTTCCGTTTTTGGgcctattaaaaaaagatactgA
- Protein Sequence
- MPKIPQYTKEALEEALEKVNTKTMSLRATAKKYNIPRGTLQFKLKNPTSKSQFGPTPYLTYEEENTIAEWLIKMARKGFPRKSDDVLDTVQKFLTDNPRDTPFVNNRPGPGWLKAFLKRHPSLVKRTSEEVTKASACVSEADIKKWFLEIRNYLTSENLLDAIQDPKRVFNADETGFQLCPSTGRVLAAKGDKNVYSVELGNSKENVTVLFTFSADGKTCPPLIVFPYKRLPEKIATSVPPKWGIGRSDSGWMTADVFNQFITEIFDPYLTESNIKRPVILFIDGHKSHITLQLSLTCKELGIELVALYPNTTRITQPADVSVFGPIKKRY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00822882; iTF_00433077; iTF_00822884; iTF_00276261; iTF_01367780; iTF_00238759; iTF_00889129; iTF_00448079; iTF_00932425; iTF_00896719; iTF_00787598; iTF_01197665; iTF_00822879; iTF_00822880;
- 90% Identity
- iTF_00276261;
- 80% Identity
- -