Hscr016630.1
Basic Information
- Insect
- Hypercompe scribonia
- Gene Symbol
- -
- Assembly
- GCA_949316085.1
- Location
- OX438979.1:7264843-7265601[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.6e-10 1.7e-07 31.9 0.0 1 38 8 46 8 51 0.93
Sequence Information
- Coding Sequence
- ATGCCGAAGATACCCCAATATACAAAAGAGGCCCTTGAGGAGGCTCTAGAAAAAGTGAACACAAAAACCATGTCATTAAGAGctacagcaaaaaaatataatatacctagAGGTACCTTACAGTTCAAACTTAAAAATCCTACTTCGAAATCCCAATTCGGACCGACACCGTATTTGACATATGAAGAAGAAAATACGATCGCAGAGTGGTTGATTAAAATGGCCCGTAAAGGCTTTCCTAGAAAGTCAGATGATGTTCTCGACACTGTTCAAAAATTTCTAACTGATAATCCACGCGATACCCCTTTTGTCAATAATCGGCCTGGTCCGGGATGGCTGAAAGCTTTTTTAAAACGTCACCCTAGTTTAGTTAAAAGAACCAGCGAGGGAGTAACTAAAACCAGTGCCTGCGTGTCTGAAGCGGACATAAAGAAATGGTTTCTTGAAATAAGAAACTACTTGACAAGTGAAAACTTGTTAGATGCAATTCAGGATCCAAAGCGTGTGTTTAATGCTGACGAGACAGGATTTCAGCTGTATCCTTCTACTGGTCGCGTACTTGCTGCTAAAGGagacaaaaatgtttattctgtGGAACTTGGAAACTCTAAAGAAAATGTTACGGTACTATTTACATTTTCCGCTGATGGCAAAACTTGTCCTCCATTAATTGTATTTCCTTACAAACGACTGCCTGAAAAATTGCGACATCAGTGCCACGTAAATGGGGTATCGGACGCAGTGATTCAGGGTGGATGA
- Protein Sequence
- MPKIPQYTKEALEEALEKVNTKTMSLRATAKKYNIPRGTLQFKLKNPTSKSQFGPTPYLTYEEENTIAEWLIKMARKGFPRKSDDVLDTVQKFLTDNPRDTPFVNNRPGPGWLKAFLKRHPSLVKRTSEGVTKTSACVSEADIKKWFLEIRNYLTSENLLDAIQDPKRVFNADETGFQLYPSTGRVLAAKGDKNVYSVELGNSKENVTVLFTFSADGKTCPPLIVFPYKRLPEKLRHQCHVNGVSDAVIQGG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00822883;
- 90% Identity
- iTF_00822879; iTF_00822882; iTF_00787598;
- 80% Identity
- -