Basic Information

Insect: Hymenopus coronatus
Gene Symbol: -
Assembly: GCA_030762935.1
Location: CM060882.1:72652357-72654786[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 8.6e+02 3.4 0.5 3 20 181 198 180 201 0.73

2 16 0.78 3.4e+02 4.7 4.5 1 19 207 225 207 229 0.92

3 16 0.067 29 8.0 0.7 2 19 247 264 246 266 0.91

4 16 0.021 9 9.6 2.2 1 23 273 295 273 295 0.92

5 16 3.7e-06 0.0016 21.5 0.6 2 23 302 324 301 324 0.95

6 16 0.00012 0.051 16.7 1.8 1 23 330 352 330 352 0.98

7 16 0.0002 0.084 16.0 0.1 1 23 358 380 358 380 0.98

8 16 2.7e-05 0.012 18.7 3.0 1 23 386 408 386 408 0.95

9 16 0.39 1.7e+02 5.6 0.3 1 23 419 444 419 444 0.95

10 16 5.4e-07 0.00023 24.1 0.7 1 23 463 485 463 485 0.98

11 16 6.8e-05 0.029 17.5 4.3 1 23 491 513 491 513 0.97

12 16 7.2e-07 0.00031 23.7 1.2 1 23 519 541 519 541 0.98

13 16 0.21 90 6.5 0.3 1 23 547 569 547 569 0.95

14 16 0.00024 0.1 15.7 2.9 1 20 575 594 575 597 0.94

15 16 7.4e-08 3.2e-05 26.8 0.2 1 23 603 625 603 625 0.98

16 16 9.9e-06 0.0042 20.1 2.4 1 23 631 653 631 653 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	8.6e+02	3.4	0.5	3	20	181	198	180	201	0.73
2	16	0.78	3.4e+02	4.7	4.5	1	19	207	225	207	229	0.92
3	16	0.067	29	8.0	0.7	2	19	247	264	246	266	0.91
4	16	0.021	9	9.6	2.2	1	23	273	295	273	295	0.92
5	16	3.7e-06	0.0016	21.5	0.6	2	23	302	324	301	324	0.95
6	16	0.00012	0.051	16.7	1.8	1	23	330	352	330	352	0.98
7	16	0.0002	0.084	16.0	0.1	1	23	358	380	358	380	0.98
8	16	2.7e-05	0.012	18.7	3.0	1	23	386	408	386	408	0.95
9	16	0.39	1.7e+02	5.6	0.3	1	23	419	444	419	444	0.95
10	16	5.4e-07	0.00023	24.1	0.7	1	23	463	485	463	485	0.98
11	16	6.8e-05	0.029	17.5	4.3	1	23	491	513	491	513	0.97
12	16	7.2e-07	0.00031	23.7	1.2	1	23	519	541	519	541	0.98
13	16	0.21	90	6.5	0.3	1	23	547	569	547	569	0.95
14	16	0.00024	0.1	15.7	2.9	1	20	575	594	575	597	0.94
15	16	7.4e-08	3.2e-05	26.8	0.2	1	23	603	625	603	625	0.98
16	16	9.9e-06	0.0042	20.1	2.4	1	23	631	653	631	653	0.97

Sequence Information

Coding Sequence: ATGGAGGAGACCTACACACTAGCCTACCTGGCTAGCAACTGTCATCGCTTTTCTTTTCCATCTGCCTGGCTACCTCGACGAGCCGCTTGTAGGGCAATAGGAGCCAAAGAAAAGAAGCCTACAATTGAATTACTGACAATAAAAACAGAGCAGGATGGGTGTGGACTGGATAATGGTTGTCAGACATATGACAATGAGGGCTTATTTTACTGTCCTCTGTGCTGCAATGGGAACATGGCAATCCAGAATACTGCACTGGATATCAGTGATGCTCTAGAGTTGGGCTTGTTAGGCCCCACTCAGTCAGGTTTGTATCAACGGCCTGTTCTCAGTCCTGAAAAACTAGAAGGACAATTAGTCCAGTTACAGACTAACCTAAATGATACCAATGCTGCTGTATGGGAAGAAATACCAGTTGTAAATGCAGAAGTGGCAACAATCACAGAGGATGGTACTGCCATGGAGGTTGTAGAAGGGATATATAACCTACCAGTTGCAGATAATATGACTTTGCTTGAGGGTGGATCTAGCCTTCCATCTTGTCGACTCTGTGGTCAGGTATTTCCAAACATTGAACTTTGTTTGGACCATGCTAAGGAACATATGGAGTCTGATTTGTATCCATGTAGCCTGTGTGAGCTATGTTTTACTAGCGAAATATGTCTTATCAGCCACTGTGAAGAGCATAAGGCAGCAGAAGTACAAATGCAAGTGCGACCAAAGGCTACAAAGCGATTGGTGTGTGCCACTTGTGGTAGGAGGTTCAACAATACAAAAACTCTAGCTGGACATTCTTGTTTCAGCATGGCACGACCTTACAAATGTTTGGACTGTGGCAAATTCTTTCAAACAGAAGCTAGGTTAATGTTCCACCAGAAGTTTCATTTAGGAGGGAACCCTGTTGAATGTGAGCACTGCGGAAAGGAGTTTACAAGAGAGAATAACTTGTTTGATCATGTCCGGCTGGTGCATATGGGTGAGAAAGCACATCGCTGTGAACAATGTGGAAAGACATTTCAACTGAAGACTCGTCTTGTGGCACATTTACGAGTTCATTCTGGGGAACGTCCATTTGTTTGCGATATATGTGGTGGAAAATTCTATGACAATGCTACATTGAAGGGTCACCGTATAACACACCTGGATGTAAAACCTTTTCAATGTGATAAATGTGGTCGTTGTTTTGCTCGCAAGACTTTATTCAAACAGCATGCACTTGCACATTCTTCAGAGGACTCCAAAACGTTAAAAGTTTATAGTTGCAAACTTTGCAATGATGGTGAAACATACACTTCGTATGCCAGATTGCTAGATCATAGAAAAGTAGTCCATCCTAACATCAAGCTTTTTGATGAAGAGGAACAACCTGTTCATTCCTCAAAACCATTTAAATGTGATGACTGTGGCAAGTCATTTGCATACAGGGTGACATTGTTAGCACATCGTCGAAATCATACTGGTGAGCTCCCCTTTGCTTGTAGTTTTTGTGAAAAGCGATTCTCCCAGAAACGATCACTAGTGCTGCATCACCGTACCCACACTGGAGAAAAGCCATTTGAATGTGATGTTTGTGGAAAACGATTTGTACAGAGTGCACATTTGTATTCGCACTTACGGCTGCACACAGGAGAAAAACCATATGCTTGTGATATATGTGGGGATAGGTTTAGGCTAAAAGATGTTAGAGATGCACATACGCGAAAGCACACAGgtgaaagaccatttaaatgCAATGTATGCAGTAAGGCATTTCGTACCAGCCATTCCTATTATCAGCATATGTGGATACATCAGGGCAAAAAGCCTTACCCATGTGGGTACTGTGGTAAGGCATTCCGTCGATCGAATGGACTTAAAATTCATATCCGTATACATACAGGTGAAAAGCCACACTCGTGTGATATATGTGGACGCTCTTTTGCTCAGAAACAGGACATGAAAAAACATAGAAACCTACATGGTGTTGGTAAACTTTAG
Protein Sequence: MEETYTLAYLASNCHRFSFPSAWLPRRAACRAIGAKEKKPTIELLTIKTEQDGCGLDNGCQTYDNEGLFYCPLCCNGNMAIQNTALDISDALELGLLGPTQSGLYQRPVLSPEKLEGQLVQLQTNLNDTNAAVWEEIPVVNAEVATITEDGTAMEVVEGIYNLPVADNMTLLEGGSSLPSCRLCGQVFPNIELCLDHAKEHMESDLYPCSLCELCFTSEICLISHCEEHKAAEVQMQVRPKATKRLVCATCGRRFNNTKTLAGHSCFSMARPYKCLDCGKFFQTEARLMFHQKFHLGGNPVECEHCGKEFTRENNLFDHVRLVHMGEKAHRCEQCGKTFQLKTRLVAHLRVHSGERPFVCDICGGKFYDNATLKGHRITHLDVKPFQCDKCGRCFARKTLFKQHALAHSSEDSKTLKVYSCKLCNDGETYTSYARLLDHRKVVHPNIKLFDEEEQPVHSSKPFKCDDCGKSFAYRVTLLAHRRNHTGELPFACSFCEKRFSQKRSLVLHHRTHTGEKPFECDVCGKRFVQSAHLYSHLRLHTGEKPYACDICGDRFRLKDVRDAHTRKHTGERPFKCNVCSKAFRTSHSYYQHMWIHQGKKPYPCGYCGKAFRRSNGLKIHIRIHTGEKPHSCDICGRSFAQKQDMKKHRNLHGVGKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00435002; iTF_00995571; iTF_00955793;
90% Identity: iTF_00435002;
80% Identity: -