Mrel004587.1
Basic Information
- Insect
- Mantis religiosa
- Gene Symbol
- -
- Assembly
- GCA_030765055.1
- Location
- CM060947.1:196062395-196065180[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.73 3.2e+02 4.4 0.6 3 23 175 195 174 195 0.78 2 16 0.86 3.8e+02 4.1 4.7 1 19 201 219 201 223 0.92 3 16 0.031 14 8.7 0.4 2 19 239 256 238 258 0.91 4 16 0.69 3.1e+02 4.5 2.4 1 23 265 287 265 287 0.79 5 16 4.7e-06 0.0021 20.7 0.7 3 23 295 316 293 316 0.95 6 16 4.5e-05 0.02 17.6 1.0 1 23 322 344 322 344 0.98 7 16 0.00014 0.064 16.0 0.1 1 23 350 372 350 372 0.98 8 16 2e-05 0.0088 18.7 3.0 1 23 378 400 378 400 0.95 9 16 0.39 1.8e+02 5.2 0.8 1 23 411 436 411 436 0.94 10 16 3.9e-07 0.00017 24.1 0.7 1 23 455 477 455 477 0.98 11 16 1.3e-05 0.006 19.3 4.3 1 23 483 505 483 505 0.98 12 16 1.2e-06 0.00052 22.6 1.2 1 23 511 533 511 533 0.98 13 16 0.024 11 9.0 0.2 1 23 539 561 539 561 0.97 14 16 0.00018 0.079 15.7 2.9 1 20 567 586 567 589 0.94 15 16 5.4e-08 2.4e-05 26.8 0.2 1 23 595 617 595 617 0.98 16 16 1.3e-05 0.0057 19.3 2.3 1 23 623 645 623 645 0.96
Sequence Information
- Coding Sequence
- ATGAAAGATTGTGCAGAAAACccaagacaggagaaccccaatccagatgatGGACCGGCAACGGGAACCAAAGAAAAGAAACCAACAGTTGAATTACTGTCAATTAAATCAGAGCAGGAAGGATGTGCATTGGATAATGGTTGTCAGACATGTGGCAGTGAGAGCTTATTCTGCTGTCCTCTGTGTTGCAATGGAAGCATGGCAATCCAGAATGCTGCACTGGATATTACTGATGCTCTAGAGCTGGGCTTGCTTGGCCCAACTCAGTCGGGTTTGTATCAACGGTCTGTTCTCAGTCCAGAAAAACTAGAAGGACAATTGATTCGATTACAGACTAATGTGAATGAGACTAGTACTGCTGTATGGGAAGATATACCAGTAGTAAATGCAGCAGTAGCAACAATTACAGAGAATGGAACAATTACAGAGAATGGTACCACAGTGGAGGTTGCTGAAGGGATATATAATCTTCCAGTTGCAGATAATATGACCTTGATTGAAGGCGGGTCTAGTCTTCCATCATGTCGAGTCTGTGGTCAGGTGTTTGCAAACATTGAACTTTGTTTGGACCATTCTAAGGTACATATGGAATCTGACTTGTTTCCATGTAGTTTGTGCGAGTTGTGTTTTACTAGTGAAATATGCCTCATCAGCCACTGTGAAGAGCATAAGGCAGCAGAAGTACAGGTACGACCAAAGTCTACAAAGCGATTGGTGTGTGCCTCTTGTGGTAGGCGATTTAACAACCCTAAGACTCTAGCTGGACATTCTTGTTGCAACCCGGCACGACCTCACAGATGTTTGGAGTGTGGTAAATACTTTCAATCAGAAGCTAGGCTTGTGTTCCATCGGAAGTTTCATTTCGGAGGGAACCCTATAATATGCGAGCACTGTGGGAAGCAGTTTTCAAGAGAGAATAACTTGTTTGATCATGTTCGGTTGGTGCATATGGGTGAGAAAGCACATCGTTGTGATCAATGTGGAAAGTCATTTCAGCTGAAGGCTCGTCTTGTGGCACATCTGCGGGTTCATTCTGGGGAACGTCCATTTGTTTGCgacatttgtggtggaaaatTCTATGACAATGCTACACTGAAGGGCCACCGCATAACACACCTGGATGTAAAACCTTTTCAGTGTGATAAATGTGGTCGTTGTTTTGCTCGCAAGACTTTATTCAAACAGCATGCACTTGCACATTCCTCAGAGGAACCCAAAACACCAAAAAATTTTAACTGCAAACTCTGCAATGATGGTGAGACATACACCTCATacacaaaattgctagatcataGAAAACTAGTCCATCCTTCTGTCAAGCTATTTGATGAAGATGAAACACCTGTTCATTCATCAAAACCATTCAAATGTGATGACTGTGGAAAGTCATTTGCATATAGAGTGACATTATTAGCCCATCGACGAAACCATACTGGTGAACTCCCTTTTGTATGCGTTTATTGCCAAAAGCGATTCTCTCAAAAACGATCACTGGTGTTACATCACCGTACCCATACTGGAGAAAAGCCGTTTGAATGTGAAATGTGTGGTAAACGGTTTGTACAGAGTGCACATTTGTATTCACACGTACGGCTACACACAGGTGAAAAACCATATGCTTGTGATATTTGTGGAGATAAATTCAGACTAAAAGATGTTAGAGATGCACATATGCGAAAGCACACAGGTGAAAGACCATTTAAATGCAATGTGTGCAGTAAGGCATTTCGTACTAGCCATTCATATTACCAGCATATGTGGATACATCAGGGTAAGAAACCTTACCCATGTGGGTACTGTGGTAAAGCATTCCGTCGATCAAATGGACTTAAAATTCATATCCGCATTCATACAGGTGAGAAGCCACACTCATGTGATGTATGTGGACGCAGCTTTGCTCAGAAACAGGACATGAAAAAACACAGAAATCTACATGTGGCTGGCAAACTTTAA
- Protein Sequence
- MKDCAENPRQENPNPDDGPATGTKEKKPTVELLSIKSEQEGCALDNGCQTCGSESLFCCPLCCNGSMAIQNAALDITDALELGLLGPTQSGLYQRSVLSPEKLEGQLIRLQTNVNETSTAVWEDIPVVNAAVATITENGTITENGTTVEVAEGIYNLPVADNMTLIEGGSSLPSCRVCGQVFANIELCLDHSKVHMESDLFPCSLCELCFTSEICLISHCEEHKAAEVQVRPKSTKRLVCASCGRRFNNPKTLAGHSCCNPARPHRCLECGKYFQSEARLVFHRKFHFGGNPIICEHCGKQFSRENNLFDHVRLVHMGEKAHRCDQCGKSFQLKARLVAHLRVHSGERPFVCDICGGKFYDNATLKGHRITHLDVKPFQCDKCGRCFARKTLFKQHALAHSSEEPKTPKNFNCKLCNDGETYTSYTKLLDHRKLVHPSVKLFDEDETPVHSSKPFKCDDCGKSFAYRVTLLAHRRNHTGELPFVCVYCQKRFSQKRSLVLHHRTHTGEKPFECEMCGKRFVQSAHLYSHVRLHTGEKPYACDICGDKFRLKDVRDAHMRKHTGERPFKCNVCSKAFRTSHSYYQHMWIHQGKKPYPCGYCGKAFRRSNGLKIHIRIHTGEKPHSCDVCGRSFAQKQDMKKHRNLHVAGKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00821178;
- 90% Identity
- -
- 80% Identity
- -