Htar004382.1
Basic Information
- Insect
- Herminia tarsipennalis
- Gene Symbol
- e2f7
- Assembly
- GCA_945859575.2
- Location
- OX243832.1:19190756-19191946[+]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-22 1.1e-18 67.8 0.0 1 65 53 119 53 119 0.91 2 3 1.8 1.7e+04 -3.3 0.0 11 29 125 142 124 143 0.68 3 3 4.2e-17 4e-13 49.9 0.1 1 64 154 244 154 245 0.90
Sequence Information
- Coding Sequence
- ATGTATGAAGATGACAACATAACTTGTACTCCAAAGCGATGCGTCCTCACTGAAGTCACAAATTCAACTAACTATGTGTCGCCAACTGCTAATCTAAAGTTACTGACAAATGTTGCACTACAATACCCTACTCCGCCACCGAGTACTGTGCATCGAAAAGAAAAATCCCTACAGATACTATGTGACAGATTCCTTCATCTGTATCCTCTTAATGGGGATGGCCCAGTGGAAATACAGTTGGATAGCACTGCAACCAGGCTAGGTGTGGAAAAACGTCGAATGTATGACATTATTAATATTCTTGAAGCTATGCAGTGTGCTGTTCACAAAAGAAAGAACACATATCTTTGGCATGGAGGCTCTCGGCTGAATTCCTTCCTAAAGATGCTTAAAAAGCAAGGAGAACACCTGAAGCTATCAGATGCTCTGCGGGGTAAAGCTCCTAAGCCTCCCACTCCAAAGCACAAGACTCTGGGAGTGTTGGCACAGAGATTTCTAATGTTATTTTTAGTTGAACCTCCTAATACTCTAATAAACCTGGAGATGGCTGTGAGAGTGCTCATAGACACAACTAATAAGACTAAAACAGTGATCTCCCCTGAGCAACAGGACCGTCAACACAAGTCTAAAGTGAGGCGACTGTATGACATTGCCAATGTATTTATTTCTATTGGTCTCATTGAAAAAGTGTCAGGTAATTTAATATTAAAAAAGCCAGTTTTTAAGTATGTGGGGCCGCATAAGATAAAATGTGACAAGGCAGCACTGGACACTCCATCACCTATAACACCACTCTCGGCATTGGACAACCAGCAGCGCACTCCAGCATGCCATGTGTTTGCTGGGCGGTCCAAACGGAAACTGGAGTTCACAACTCCAACTTCCACCAAAGAACTTAAGTTTGGTATAACAACCCCACCTCACACACCGTCACACAAGTGGGATGAGATCCTACTTGTTGCTGACATGGAACTGACTAGAATTAACAATGGAGTTGTCTTGTGA
- Protein Sequence
- MYEDDNITCTPKRCVLTEVTNSTNYVSPTANLKLLTNVALQYPTPPPSTVHRKEKSLQILCDRFLHLYPLNGDGPVEIQLDSTATRLGVEKRRMYDIINILEAMQCAVHKRKNTYLWHGGSRLNSFLKMLKKQGEHLKLSDALRGKAPKPPTPKHKTLGVLAQRFLMLFLVEPPNTLINLEMAVRVLIDTTNKTKTVISPEQQDRQHKSKVRRLYDIANVFISIGLIEKVSGNLILKKPVFKYVGPHKIKCDKAALDTPSPITPLSALDNQQRTPACHVFAGRSKRKLEFTTPTSTKELKFGITTPPHTPSHKWDEILLVADMELTRINNGVVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00967840;
- 90% Identity
- iTF_01491668; iTF_00404483; iTF_00869414; iTF_00363817; iTF_01197513; iTF_00282058; iTF_01151852; iTF_00706737; iTF_01166385; iTF_00637266; iTF_01501877; iTF_00822678; iTF_00280921; iTF_00441274; iTF_00908603; iTF_00636062; iTF_00156991; iTF_01259871; iTF_00708967; iTF_01435850; iTF_01332334; iTF_00449912; iTF_00049689; iTF_01075164; iTF_01264190; iTF_01076177; iTF_00000107; iTF_00000973; iTF_00017969; iTF_00383410; iTF_00924380; iTF_00821567; iTF_01534583;
- 80% Identity
- -