Hill000720.1
Basic Information
- Insect
- Hermetia illucens
- Gene Symbol
- stc
- Assembly
- GCA_905115235.1
- Location
- NC:167177433-167182879[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.92 1.2e+04 -4.0 1.6 15 19 311 315 310 315 0.81 2 13 0.05 6.7e+02 0.0 0.3 4 10 344 350 343 352 0.93 3 13 5.3e-06 0.071 12.7 16.7 4 19 358 373 355 373 0.94 4 13 1.3e-06 0.018 14.7 12.6 3 19 411 427 409 427 0.91 5 13 1.6e-09 2.1e-05 24.0 13.7 1 19 467 485 467 485 0.98 6 13 2.2e-05 0.29 10.8 16.4 4 19 533 548 526 548 0.88 7 13 0.015 2e+02 1.7 11.1 1 11 588 598 588 610 0.91 8 13 4e-10 5.4e-06 25.9 14.2 1 18 615 632 615 633 0.97 9 13 0.84 1.1e+04 -3.9 0.5 6 10 662 666 661 667 0.76 10 13 0.61 8.1e+03 -3.4 12.6 9 18 679 689 669 690 0.83 11 13 8e-08 0.0011 18.6 14.2 1 16 726 741 726 751 0.88 12 13 3.8e-07 0.0051 16.4 12.3 2 19 759 777 758 777 0.91 13 13 0.22 3e+03 -2.0 0.5 7 12 792 797 786 797 0.71
Sequence Information
- Coding Sequence
- ATGTCGAGCTACACGTCGTCTTCCAACCAGGACGAAGGGGGCGCGAACGGCTACGTAGACTTcaaccagttcctcttgcagcaCAACTATATCGGCGGCAACTCCTTCGCGCCGCAATTCAATGATTTCTATAACCAGGCGTACAGCCAGGTGCCTTACATGCCAAATATGGAGTCTAACGTGTTCCAGCCGCAGCCCAGCACGTCTGCACTCGCCCAGGAACAGCAGCGGCTGAGCAGTGATATCGCGAGCAACTCCACTTTGGCGCCAACTGCCGCCGAATTCATTCCACGCTTCAGCACGATGAGTCTCGCCGACACCCAGCCCCAGGTCGATTTCTCGTTCGAGGCGGGCAATGGCGCGAGTGTCGATAATCGGAAACCGCAGGCGTCGAACTCTGTCCAGAATGAGAACGTTCGCGATCGGAATCCGAAGGAAAAACGCAACACGGGCGCGATAAGCAAACGCAGCCGCCACCAGTACTACGACCAGCAGAGGTACGAgcgcaacaacaacagcaacggAGGCTACAATTCCAATGGGCAGCGCCCGGATAACAACAACGGGCGCAATAACCGACGACGGGACAACTGGCGCAACTATAGGGACATCAACAAGTCGTCGCCGCAGAAGAAGCCGCCCGACGCCAGCCTGGACAATTCCCCGAAGCACTCGAACTCAAGTCTGGACGGCGAGCCCATTGGCGTGGTGTCCCCGCGAGCCTCGGAGCTCAGTCTCGACTCGCAGAAGTGCTCACAGCGCGACAAACTCATTCGGGAGATCGAGGCTCGCAAGCTGGAGTGTCTGGTGTGCGTGGAGCCGATCAAAGGGCATCATTCGGTCTGGTCCTGTTCTAACTGTTACCATATCCTGCACCTGGTCTGTACCACAAAGTGGGCTTCAAGCTCGCAATCCAACGACGGCTGGCGGTGTCCCGCGTGCCAAAATGTCACGAAAACCATTCCCCGCGAGTACTACTGCTTCTGCGGAAAACTCAAGAACCCTCCGTACAACCGGAGCGACGTGGCGCACAGCTGCGGTGAGACGTGTGGCCGGAAGGATGCCTGTCCGCATCCTTGCACGCTGCTCTGCCATCCGGGGCCATGTCCGCCGTGCCAGGTCATGGTGCAGCGGGAGTGTGGCTGCGGTCGGACCAAGAAATCAATGCAGTGCTGCATCCGAGAGGACATCGAGTGTGATAACAAATGCGAGAAGTTGCTGAACTGCGAACTGCACGAATGTGACGAGAGCTGCCACAAGGGCAAGTGTCCCAGTTGCAAGCACAAAGTCGACCAGCAGTGCTACTGCTCCAAGGTGAACCGGCAGGTTGCCTGCACGCGGGAGTCCAACGAGAAGAAGCAGTTCTCGTGCGGAAAGCCATGCAACAAGCCCTTGGCGTGCGGCAATCATAAATGCAAGGACAACTGCCACGCTGGAGACTGCAAGCCTTGCAAACTCACGCCTGAGGTGGTCACGTCGTGTCCCTGTGGAAAGATGATGATCAAACGGGACGAGCGGAAGTCGTGTCTGGACCCAGTGCCGACGTGCACGGGAGTTTGCGGAAAGACATTAAAGTGCGGACCTCCAGCCGCGCCCCATCACTGCACTAGCCAATGCCATTCAGGCAACTGTCCTCCTTGCAGCAAGCAAACGGCCGTTCGCTGCCGCTGCGGGAACATGGACCAAATGATCAAGTGTCGTCAGCTTGTCACTCGGGCGGACGATGCGCGCTGCAAGAAACGTTGTACGAAGAAGCGCAGCTGTGGCAAGCACAAATGCGCGCAAGAATGCTGCATCGATATCGATCACATCTGCCCGATGCCCTGCAACCACACCCTGTCGTGCGGCAAGCACAAATGCGACCAGTCCTGCCACCGCGGCAACTGCCCGCCATGCTACAGGAGCTCCTTTGACGAGCTCTACTGCGAGTGTGGAGCGAATGTGATCTATCCACCCATTCCGTGCGGTACCAAGCGTCCTGCCTGCAACAATCCATGTACGCGCCAGCACCCATGCGATCATCCTGTTCAGCACAATTGCCATTCGGGCCCCACGTGTCCGCCGTGTATCGTCCTCACTACGAAGTATTGTTTCGGCAAACACgaacagcggaagacgattcCCTGCACCCAGGCGAGCTTCAGCTGTGGCCTACCGTGCAACAAGGATTTGAGTTGCGGCCGCCATAAGTGCATCAAGCCATGCCACGATGGGGCCTGCCAAGCTCCCGGGGAGGTTTGCAAACAGAGCTGCCAAACGCCACGGGCGAATTGCGCCCATAAATGCAATGCTCCGTGTCATGATGGCGATTGTCCGGATACTCCCTGTCGGGAAACTGTGGAAGTGACCTGCGAGTGCGGCAACCGCAAGCAGACACGCACTTGTCATGACTTTTCAAGCGAATATAGGCGAATTGCGACCGCCCAGCTGGCCTCGTCGATGCAGGAGATGCAGAGAGGCAACATGGTCGACCTCAAGGACATCTTGGGTCCAGTTAAAACCACCAGCAACAAAACTCTTGAATGCAACGAAGAATGCAAAATACTCGAGCGCAACCGCCGCCTGGCAATTGGCTTGCAAATCCGCAATCCTGATTTGCAGTCGAAGCTACTCACTCGCTATTCGGACTTTATTCGTGGCTGGGCGCGCAAGGATCCGAATCTGGTGAAAATGATTCACGACAAGCTCACGGAGCTGGTCAAGTTGTCGAAGGAGAGCAAGCAGAAGTCGCGGAGCCACTCGTTCCCGACTATGAATCGCGAGAAGCGCCAACTCGTGCACGAAATGTGCGGAATGTTTGGCGTGGATTCGGTCGCATACGATGCCGAACCGAATCGTAATGTCGTGGCGACGGCGCACAAGGAGAAGTCGTGGCTTCCGGCAATGAGCATTATGGAAATTATGGAGCGCGAGAGCGGGCAACGACGCGTTCCTGTGCCAAATAACAACGCCTGGGGGTTGAAGAAGTAA
- Protein Sequence
- MSSYTSSSNQDEGGANGYVDFNQFLLQHNYIGGNSFAPQFNDFYNQAYSQVPYMPNMESNVFQPQPSTSALAQEQQRLSSDIASNSTLAPTAAEFIPRFSTMSLADTQPQVDFSFEAGNGASVDNRKPQASNSVQNENVRDRNPKEKRNTGAISKRSRHQYYDQQRYERNNNSNGGYNSNGQRPDNNNGRNNRRRDNWRNYRDINKSSPQKKPPDASLDNSPKHSNSSLDGEPIGVVSPRASELSLDSQKCSQRDKLIREIEARKLECLVCVEPIKGHHSVWSCSNCYHILHLVCTTKWASSSQSNDGWRCPACQNVTKTIPREYYCFCGKLKNPPYNRSDVAHSCGETCGRKDACPHPCTLLCHPGPCPPCQVMVQRECGCGRTKKSMQCCIREDIECDNKCEKLLNCELHECDESCHKGKCPSCKHKVDQQCYCSKVNRQVACTRESNEKKQFSCGKPCNKPLACGNHKCKDNCHAGDCKPCKLTPEVVTSCPCGKMMIKRDERKSCLDPVPTCTGVCGKTLKCGPPAAPHHCTSQCHSGNCPPCSKQTAVRCRCGNMDQMIKCRQLVTRADDARCKKRCTKKRSCGKHKCAQECCIDIDHICPMPCNHTLSCGKHKCDQSCHRGNCPPCYRSSFDELYCECGANVIYPPIPCGTKRPACNNPCTRQHPCDHPVQHNCHSGPTCPPCIVLTTKYCFGKHEQRKTIPCTQASFSCGLPCNKDLSCGRHKCIKPCHDGACQAPGEVCKQSCQTPRANCAHKCNAPCHDGDCPDTPCRETVEVTCECGNRKQTRTCHDFSSEYRRIATAQLASSMQEMQRGNMVDLKDILGPVKTTSNKTLECNEECKILERNRRLAIGLQIRNPDLQSKLLTRYSDFIRGWARKDPNLVKMIHDKLTELVKLSKESKQKSRSHSFPTMNREKRQLVHEMCGMFGVDSVAYDAEPNRNVVATAHKEKSWLPAMSIMEIMERESGQRRVPVPNNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00323142; iTF_01000231; iTF_01089680; iTF_01376316;
- 90% Identity
- -
- 80% Identity
- -