Mpol023800.1
Basic Information
- Insect
- Microchrysa polita
- Gene Symbol
- stc
- Assembly
- GCA_949715475.1
- Location
- OX454418.1:108083409-108086672[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.93 3.8e+04 -4.0 1.6 15 19 324 328 323 328 0.81 2 12 0.0069 2.9e+02 2.8 0.2 4 10 357 363 356 364 0.95 3 12 3.1e-05 1.3 10.3 16.9 4 19 371 386 369 386 0.93 4 12 5.9e-06 0.24 12.6 10.9 3 19 424 440 422 440 0.91 5 12 3.5e-09 0.00015 22.9 15.0 1 19 480 498 480 498 0.98 6 12 0.00012 5 8.4 17.7 4 19 546 561 539 561 0.88 7 12 0.016 6.6e+02 1.6 11.2 1 11 601 611 601 623 0.91 8 12 2.2e-10 9.1e-06 26.7 15.5 1 18 628 645 628 646 0.97 9 12 0.77 3.2e+04 -3.7 0.7 6 10 675 679 674 680 0.72 10 12 1 4.1e+04 -10.2 12.7 10 18 693 702 682 703 0.73 11 12 3.3e-08 0.0014 19.8 15.6 1 16 739 754 739 764 0.88 12 12 8.6e-05 3.5 8.9 11.5 4 19 773 790 771 790 0.93
Sequence Information
- Coding Sequence
- ATGTCGAGCTATGCGTCGTCTTCCAATCAGGACGATCGAAATCAGAATAGCTACGTGGACTTTAACGAATTTTTAGTGCAGCACAATTATGTGAGCGCCGACAGATTTGGCGGTCAATTCAACGATTTCTACGGGCAGGCGTACAGTCAGGTGCCTTACATGCCGAATGTCGACTTCAACATTTTCCAACCACAGCCCGGCACATCTCAGATGGAACAATCTTCGAATGGTTTTGAAGCGGAAGCCAGCAACTCTGGCCTGGCGAGTACTTCCACACTTCTCCCAACAGCGGCCGAATTCATTCCCCGTTTCAACAATTTGAGCTTGACGGATACATCCCCGCAAGTGGATTTTTCTTTCGAAGCGGGTGACAGTAGCAGCGGTTTGGTAATAGACAATTGGAAGCCGCCGAGCTCCAACTCGCCTTCCATTGAGAGCGGTCGTGACCGCaatactcataaaaatcgcAACACAGGGGCGATTAGTAAACGGAATCATGGTCGCAATCAGTACTACGACCAGCAAAGATACGAGCGTAACAACAACGGAAATTACCACAGCTCAAATGGCCATCGTTCGGAGAATACCACTCCGAATAACAACAGCAGCCGCAACAATCGCGGTCGAGACAACTGGCGCAATCACAGAGACAACAAGGCGTCTCCTCAAAAAAAGAAGTCCGAACCACGCCCCGACGACTCTCCGAAGCACTCCAACTCGAGTGTAGAAGGTGAGGCGTCTACCACCGTAGCAAGCATCCAGCCCGAAGCAACCGGTGACTCGCAAAAGTGCTCGCAACGCGACAAACTGATTCGCGAGATTGAAACGCGCCGTTTGGAGTGTCTGGTTTGTGTGGAGCAGATAAAGAGCCACCAACCCGTCTGGTCTTGTTCCAACTGTTACCATATTCTGCATTTGGCGTGCACCACAAAGTGGGCATCCAGTTCCAAATCAAATGACGGCTGGCGTTGTCCTGCTTGCCAGAATGTCACCAAAGCCATTCCCCGCGAGTACTACTGTTTCTGCGGTAAGATGAAGAATCCATCATACAATCGAAACGACATGGCACACACTTGTGGCGAGCCATGTGGTCGAAAAGATTCCTGTCCGCATCCCTGCACGTTGCTCTGTCATCCCGGGCCGTGTCCGTCGTGTCAGGTGATGGTGAAGCGGGAATGTGGTTGCGGCCGTACGAGCACCTCAACTCAATGCTGTATGCGCGACGACATCGAATGCGACGCGACTTGTGAGAAGTTGCTCAATTGCGAATTACACTCGTGCCCCGAATTTTGTCACAAGGGCAAGTGCTCGAGTTGCAAGCATAAAATCGatcaacaatgtttttgttgcaaaGTTAATCGGCAGGTGGCATGTACGCGAGAATCTAATGATAAAAAGCAGTTCTCGTGCGGTAAGCCCTGTAACAAGCCTCTCGGTTGCGGTAATCACAAATGCAAGGACAATTGCCATTCGGGCGAGTGTAAACCGTGTAAATTGACGCCACAAATGTTGAAATCGTGTCCTTGTGGAAAAATGATGATTAAAATGGACGAACGAGAGTCCTGTCTGGATCCCATTCCCACATGCACGGGTGTCTGTGGAAAGACATTAAAATGTGGCCCTCCGTCGAAACCGCATCACTGCACAAATCAGTGCCACACGGGGAACTGCCCTCCTTGTACGAAGCAAACAGCAGTTCGTTGCCGCTGCGGAAATATGGACCAGATGATCAAGTGTCGTCAGCTGGTGACTCGGGCCGACGATGCCCGCTGCAAGAAACGCTGCACAAAGAAACGAAGTTGTGGCAAGCACAAATGCGCTCAAGAATGCTGCATAGATATAGATCACATTTGCCCAATGCCTTGCAACCATACGCTATCGTGTGGCAAGCACAAATGCGATCAGCCATGTCATCGGGGCAATTGCCCACCCTGCTATCGCAGTTCATTTGACGAACTGTACTGCGAGTGTGGAGCTAACGTAATATATCCGCCCGTTCCGTGTGGAACAAAACGACCGGCTTGCAAAAATCCTTGTACACGTCAGCACCCCTGTGACCACCCGGTTCAGCACAATTGCCATTCGAGCCCGACGTGTCCGCCTTGCATCATCCTGACTACGAAATACTGTTTCGGGAAGCACGAACAACGCAAAACAATTCCATGTAACCAGGAGAGCTTCAGTTGCGGCCTGCCGTGTAACAAAGATTTGAGTTGTGGTCGCCATAAGTGCATAAAGCCATGTCACGAGGGTCCCTGTCAGGCACCCGGTGAAGTTTGCAAGCAGAGCTGCCAAACAATACGTATAACATGTGTCCACAAATGCAGCGCACCGTGTCATGACGATGATTGTCCTGACACACCATGTCGCGAAAGTGTTGAGGTAACGTGTGAGTGTGGGCATCGTAAGCAAATGCGTAACTGCCACGATTTCGCCAGCGAATACAGACGAATCGCAACCGCTCAGCTGGCCTCGTCAATGCAAGAAATGCAGCGAGGCAACTCGGTGGATCTGAAAGACATTTTGGGCCCCATCAAAGTGACAAACAACAAAACGCTAGAATGTAGTGAAGAGTGCAAGGTTCTCGATCGAAATCGTCGTTTAGCACTGGCCCTTCAAATACGAAACCCTAGCCAACAATCGAAACTCAGCACGCGCTACTCGGATAACATTCGTAGTTGGGCGAAAAAGGATCCAAATCTGGTTAAAATGATACACGACAAACTTACAGAACTGGTCAAATTGTCGAAAGAGAGTAAGCAAAAATCACGAAGTCATTCGTTTCCAACTATGAATCGTGAGAAGCGACGGCTCGTTCACGAAATGTGCGCCATGTTTGGCGTGGACTCGGTGGCCTATGACGCGGAACCCAATCGAAATATTGTGGCGACAGCACACAAAGAACGGTCCTGGTTGCCGGCTGTGAGTATTATGGAAATTATGGAGCGGGAAAGCGGGCAGCGGCGTGTTCCTGTGCCAAACAACAATGCGTGGGGCGTGAAGAAATGA
- Protein Sequence
- MSSYASSSNQDDRNQNSYVDFNEFLVQHNYVSADRFGGQFNDFYGQAYSQVPYMPNVDFNIFQPQPGTSQMEQSSNGFEAEASNSGLASTSTLLPTAAEFIPRFNNLSLTDTSPQVDFSFEAGDSSSGLVIDNWKPPSSNSPSIESGRDRNTHKNRNTGAISKRNHGRNQYYDQQRYERNNNGNYHSSNGHRSENTTPNNNSSRNNRGRDNWRNHRDNKASPQKKKSEPRPDDSPKHSNSSVEGEASTTVASIQPEATGDSQKCSQRDKLIREIETRRLECLVCVEQIKSHQPVWSCSNCYHILHLACTTKWASSSKSNDGWRCPACQNVTKAIPREYYCFCGKMKNPSYNRNDMAHTCGEPCGRKDSCPHPCTLLCHPGPCPSCQVMVKRECGCGRTSTSTQCCMRDDIECDATCEKLLNCELHSCPEFCHKGKCSSCKHKIDQQCFCCKVNRQVACTRESNDKKQFSCGKPCNKPLGCGNHKCKDNCHSGECKPCKLTPQMLKSCPCGKMMIKMDERESCLDPIPTCTGVCGKTLKCGPPSKPHHCTNQCHTGNCPPCTKQTAVRCRCGNMDQMIKCRQLVTRADDARCKKRCTKKRSCGKHKCAQECCIDIDHICPMPCNHTLSCGKHKCDQPCHRGNCPPCYRSSFDELYCECGANVIYPPVPCGTKRPACKNPCTRQHPCDHPVQHNCHSSPTCPPCIILTTKYCFGKHEQRKTIPCNQESFSCGLPCNKDLSCGRHKCIKPCHEGPCQAPGEVCKQSCQTIRITCVHKCSAPCHDDDCPDTPCRESVEVTCECGHRKQMRNCHDFASEYRRIATAQLASSMQEMQRGNSVDLKDILGPIKVTNNKTLECSEECKVLDRNRRLALALQIRNPSQQSKLSTRYSDNIRSWAKKDPNLVKMIHDKLTELVKLSKESKQKSRSHSFPTMNREKRRLVHEMCAMFGVDSVAYDAEPNRNIVATAHKERSWLPAVSIMEIMERESGQRRVPVPNNNAWGVKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00793952;
- 90% Identity
- -
- 80% Identity
- -