Haes011755.2
Basic Information
- Insect
- Hemithea aestivaria
- Gene Symbol
- sip1
- Assembly
- GCA_947507615.1
- Location
- OX382341.1:10620858-10630773[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5e-08 0.00011 22.6 0.0 3 55 367 419 365 423 0.90 2 3 4.6e-52 3.2e-48 165.3 0.1 14 275 437 676 434 676 0.95 3 3 1.5 1e+04 -3.6 0.0 75 104 690 721 681 731 0.49
Sequence Information
- Coding Sequence
- ATGTCTGACGATGAGGTTATACGGTTCGAAATCACTGACTACGATTTGGACAATGAATTTAATTTTAATAGGGGTCGAAAAGCTAAGAAAGAACATCAGATTTACGGTGTGTGGGCCAAAGACAGTGATGAAGAAGATAATGAAGACAATATTAGGCAAAGGACGAGGAAACAAAAAGACTTCTCAGCGCCCATTGGTTTTGTCGCCGGTGGTGTACAACAGGCTGGCAAGAAGAAGGAAGGAAAGAAAGAGTTAGAATCAACAGAGGCGTCCACATCTCGTCCCAGGTTTGCTCCCGATAGCTCGGATGAGGAGGAACCAGACCAGCCGGCTGAGAGTGAGACAGCAGGCATTAGGAGAAAGGGACAGGGCATGAGGTCCGTCAACCTCGGGAGTAATATGGGAAATTGGGAGAAACACACTAAGGGCATTGGTGCTAAGCTGTTGTTACAGATGGGTTACCAACCAGGCAAAGGTCTGGGCAAAGATCTCCAGGGTATATCTAATCCTGTGGAAGCCACTGTGAGGAAAGGAAGGGGTGCTATTGGTGCTTATGGCCCTGAAAAAGCTGCACAAAAAGCCAAGAGAGAAGAAGAGAAACGCCTGAAAGAGAAGGAAGAACAGGAGAAAGGTACAGAGAAGTCATACAATTGGAAGAAATCACATAAGGGACGGTACTTCTATAAGGACTCGGCTGACGTCATACAAGAAGGGAAACCTACCTTGCATACTGTTTCTAGTAACGAATTAGCCCGCGTCCCAGTAATCGACCTGACGGGGCGAGAGAAGCGAGTATTAAGTGGGTACCACGCGCTCCGTGCCGCCGCGCCGCGCTTCGAACACGAGCCGCGACGGAAATGTGAACACTTCGCCGCGCCTGAACTGGCGCACAACTTGACTCTCATGGTCGACTGCTGTGAACAGGATATAATCCAAAATGCCCGTGAACTTCAAGCCGCCGAAGACGAAATAGTCGTTCTAGAAAGAGACCTAGACGAGTGCAACCTGAAGCTACAAGAACAAGACATGGTCATAGATAAGATGCAGACTTTGTTAGGCAAGGTTGAGGCTCTGAACAAGCCTGACTTGTCTCTGGAATCCGCTTATGAAGTGTTAGCTGAACTAAAGGGAAGCCACCCTCTCGAGTACGAAATGTTCGGGCTCAGTACAATAGCTGGCAACATCGTCAGTCCATTACTGAGCTCACTACTGGCCCCGTGGGATCCTCTAGAAGCTCCTAATGAGCCGATACCCATATTCATTATTATTATTATCTCATATTTTCCAGGGAAGCCACCCTCTAGAGGAAGCCACCCTCTAGAGTACGAAATGTTCGGGCTGGGTACGATAGCTGGCAACATCGTCAGCCCATTACTAAGCTCACTACTAGCTCCGTGGGATCCTCTAGAAGCTCCTGACGAGCCAATACCGATATTTCTCAAGTGGAAGGAGTTGCTCAGCGACGAGGCGTATAACAGTCTGCTGTGGCAACACTGTATGCCGCATATTACCGCTGCTGCTGAGGCGTGGAACCCTCGAACTCCAGCTCCAATGGTTCGAGCAGTAGAAGCGTGGGTGTCGCTGGGAGCCGGTGGAGTGGCAGCTCGGTGCGTGGTGCCGCGACTGCTGGCTGCAGCTCGCGCCTGGGACCCCACCACCGACCCTCAACCCGTGCACGGCTGGCTGCTGCCCTGGCATGACCTGGCTGGTGAAGCGCTATCAACGACGGTGTACCCGTTGATCCGCAGCCGGCTAGCCCGGGCGCTATCCGCCTGGCACCCGGCGGACGGCTCAGCCCGAGGCGTGCTAGGCGCTTGGAAGGAGGCGTGGGGGCCTGCGTTAGCGCCCATACTGCACCATCATGTCGTACCTAAACTGGAGCACTGTCTGCATCACGCGCCGCTTGATCTCGTCGGCGGGGACAATACGGCATGGCTATGGTGCGTGGAGTGGCTAGAGTTACTAGGCGCGCCTACAGTGGCAGCCATCGCGAGTAGAGCGTTGTTACCGCGCTGGCTCGCAGCCCTGGCCGCTTGGCTCAACACCAACCCTACGCACGCTACTGTGTTGCACTCTTACACTGACTTCAAGAAAATGTTTCCCGAAGAAGTGCTAAAAGAGCCGGCAGTGCGCGACTCGTTCCGTAAAGCGTTAGACATGATGAACCGCAGCACCGACCTGGACTCTGTGGAGCCGCCGCCGCCGCCGCGCTTCACGCAGCCCGACGTCAAGGAAACTTCTAGAATCGCTGATGTACTGGCTTCAGTCACCCAACAAAAGAGCTTCTCCGAACTTCTGGAATCAAGATGTGTGGAAAAAGGCATCACCTACGTGCCGATGGTGGGCAAGTCTCGGGAAGGAAGACCCATTTACAAGATAGGCAATATGCAGTGTTACGTCATAAGGAATGTTATTATGTACTCGGAAGACGGTGGTAGAAGCTTCGGACCAATAGCCATAGACCGACTTCTGAATTTAGTTGAAGATTAA
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNFNRGRKAKKEHQIYGVWAKDSDEEDNEDNIRQRTRKQKDFSAPIGFVAGGVQQAGKKKEGKKELESTEASTSRPRFAPDSSDEEEPDQPAESETAGIRRKGQGMRSVNLGSNMGNWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISNPVEATVRKGRGAIGAYGPEKAAQKAKREEEKRLKEKEEQEKGTEKSYNWKKSHKGRYFYKDSADVIQEGKPTLHTVSSNELARVPVIDLTGREKRVLSGYHALRAAAPRFEHEPRRKCEHFAAPELAHNLTLMVDCCEQDIIQNARELQAAEDEIVVLERDLDECNLKLQEQDMVIDKMQTLLGKVEALNKPDLSLESAYEVLAELKGSHPLEYEMFGLSTIAGNIVSPLLSSLLAPWDPLEAPNEPIPIFIIIIISYFPGKPPSRGSHPLEYEMFGLGTIAGNIVSPLLSSLLAPWDPLEAPDEPIPIFLKWKELLSDEAYNSLLWQHCMPHITAAAEAWNPRTPAPMVRAVEAWVSLGAGGVAARCVVPRLLAAARAWDPTTDPQPVHGWLLPWHDLAGEALSTTVYPLIRSRLARALSAWHPADGSARGVLGAWKEAWGPALAPILHHHVVPKLEHCLHHAPLDLVGGDNTAWLWCVEWLELLGAPTVAAIASRALLPRWLAALAAWLNTNPTHATVLHSYTDFKKMFPEEVLKEPAVRDSFRKALDMMNRSTDLDSVEPPPPPRFTQPDVKETSRIADVLASVTQQKSFSELLESRCVEKGITYVPMVGKSREGRPIYKIGNMQCYVIRNVIMYSEDGGRSFGPIAIDRLLNLVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00790280; iTF_00791213;
- 90% Identity
- iTF_00791213;
- 80% Identity
- -