Haes011766.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hemithea aestivaria
Gene Symbol
sip1
Assembly
GCA_947507615.1
Location
OX382341.1:10736998-10754651[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-53 9.4e-50 170.4 0.1 3 275 367 617 365 617 0.95
2 2 1.3 9.4e+03 -3.5 0.0 75 104 631 662 622 672 0.49

Sequence Information

Coding Sequence
ATGTCTGACGATGAGGTTATACGGTTCGAAATCACTGACTACGATTTGGACAATGAATTTAATTTTAATAGGGGTCGAAAAGCTAAGAAAGAACATCAGATTTACGGTGTGTGGGCCAAAGACAGTGATGAAGAAGATAATGAAGACAATATTAGGCAAAGGACGAGGAAACAGAAAGACTTCTCGGCGCCCATTGGTTTTGTCGCCGGTGGAGTGCAACAGGCTGGCAAGAAGAAGGAAGGAAAGAAAGAGTTAGAATCAACAGAGGCGTCCACATCCCGTCCCAGGTTTGCTCCCGATAGCTCCGATGAGGAGGAACCAGACCAGCCGGCTGAGAGTGAGACAGCAGGCATTAGGAGAAAGGGACAGGGCATGAGGTCCGTCAACCTTGGGGGTAATATGGGGAATTGGGAGAAACACACTAAGGGCATTGGTGCTAAGCTGTTGTTACAGATGGGTTACCAACCAGGCAAAGGTCTGGGCAAAGATCTCCAGGGTATATCTAATCCAGTGGAAGCCACTGTGAGGAAAGGAAGGGGTGCTATTGGTGCTTATGGCCCTGAAAAAGCTGCTCAAAAAGCCAAAAGAGAAGAAGAGAAACGCTTAAAAGAGAAGGAAGAACAAGAGAAAGGTACAGAGAAGTCATACAACTGGAAGAAATCACATAAGGGACGGTACTTCTATAAAGACTCGGCTGACGTTATACAAGAGGGGAAACCTACCTTGCATACTGTTTCTAGTAACGAATTAGCCCGCGTCCCAGTAATCGACCTGACGGGGCGTGAGAAGCGAGTATTAAGTGGGTACCACGCGCTCCGTGCCGCCGCGCCGCGCTTCGAACACGAGCCGCGACGGAAATGTGAACACTTCGCCGCGCCTGAACTGGCGCACAACTTGACTCTCATGGTCGACTGCTGTGAACAGGATATAATCCAAAACGCCCGTGAACTTCAAGCCGCCGAAGACGAAATAGTCGTTCTAGAAAGAGACCTAGACGAGTGCAACCTGAAGCTACAAGAACAAGACATGGTCATAGATAAGATGCAGACTTTGTTAGGCAAGGTTGAGGCTCTGAACAAGCCTGATTTGTCTCTGGAATCCGCTTATGAAGTGTTGGCTGAATTAAAGGGAAGCCACCCTCTAGAGTACGAAATGTTCGGGCTGGGTACAATAGCTGGTAACATCGTCAGCCCATTACTAAGCTCACTACTAGCTCCGTGGGATCCTCTAGAAGCTCCTGACGAGCCAATACCGATATTTCTCAAGTGGAAGGAGTTGCTCAGCGACGAGGCGTATAACAGTCTGCTGTGGCAACACTGTATGCCGCATATTACCGCTGCTGCTGAGGCGTGGAACCCTCGAACTCCAGCTCCAATGGTTCGAGCAGTAGAAGCGTGGGTGTCGCTGGGAGCCGGTGGAGTGGCAGCTCGGTGCGTGGTGCCGCGACTGCTGGCTGCAGCTCGCGCCTGGGACCCCACCACCGACCCTCAACCCGTGCACGGCTGGCTGCTGCCCTGGCATGACCTGGCTGGTGAAGCGCTATCAACGACGGTGTACCCGTTGATCCGCAGCCGGCTAGCCCGGGCGCTATCCGCCTGGCACCCGGCGGACGGCTCAGCCCGAGGCGTGCTAGGCGCTTGGAAGGAGGCGTGGGGGCCTGCGTTAGCGCCTATACTGCACCATCATGTCGTACCTAAACTGGAGCACTGTCTGCATCACGCGCCGCTTGATCTCGTCGGCGGGGACAATACGGCATGGCTATGGTGCGTGGAGTGGCTAGAGTTACTAGGCGCGCCTACAGTGGCAGCCATCGCGAGTAGAGCGTTGTTACCGCGCTGGCTCGCAGCCCTGGCCGCTTGGCTCAACACCAACCCTACGCACGCTACTGTGTTGCACTCTTACACTGACTTCAAGAAAATGTTTCCCGAAGAAGTGCTAAAAGAGCCGGCAGTGCGCGACTCGTTCCGTAAAGCGTTAGACATGATGAACCGCAGCACCGACCTGGACTCTGTGGAGCCGCCGCCGCCGCCGCGCTTCACGCAGCCCGACGTCAAGGAAACTTCTAGAATCGCTGATGTACTGGCTTCAGTCACCCAACAAAAGAGCTTCTCCGAACTTCTGGAATCAAGATGTGTGGAAAAAGGCATCACCTACGTGCCGATGGTGGGCAAGTCTCGGGAAGGAAGACCCATTTACAAGATAGGCAATATGCAGTGTTACGTCATAAGGAATGTTATTATGTACTCGGAAGACGGTGGTAGAAGCTTCGGACCAATAGCCATAGACCGACTTCTGAATTTAGTTGAAGATTAA
Protein Sequence
MSDDEVIRFEITDYDLDNEFNFNRGRKAKKEHQIYGVWAKDSDEEDNEDNIRQRTRKQKDFSAPIGFVAGGVQQAGKKKEGKKELESTEASTSRPRFAPDSSDEEEPDQPAESETAGIRRKGQGMRSVNLGGNMGNWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISNPVEATVRKGRGAIGAYGPEKAAQKAKREEEKRLKEKEEQEKGTEKSYNWKKSHKGRYFYKDSADVIQEGKPTLHTVSSNELARVPVIDLTGREKRVLSGYHALRAAAPRFEHEPRRKCEHFAAPELAHNLTLMVDCCEQDIIQNARELQAAEDEIVVLERDLDECNLKLQEQDMVIDKMQTLLGKVEALNKPDLSLESAYEVLAELKGSHPLEYEMFGLGTIAGNIVSPLLSSLLAPWDPLEAPDEPIPIFLKWKELLSDEAYNSLLWQHCMPHITAAAEAWNPRTPAPMVRAVEAWVSLGAGGVAARCVVPRLLAAARAWDPTTDPQPVHGWLLPWHDLAGEALSTTVYPLIRSRLARALSAWHPADGSARGVLGAWKEAWGPALAPILHHHVVPKLEHCLHHAPLDLVGGDNTAWLWCVEWLELLGAPTVAAIASRALLPRWLAALAAWLNTNPTHATVLHSYTDFKKMFPEEVLKEPAVRDSFRKALDMMNRSTDLDSVEPPPPPRFTQPDVKETSRIADVLASVTQQKSFSELLESRCVEKGITYVPMVGKSREGRPIYKIGNMQCYVIRNVIMYSEDGGRSFGPIAIDRLLNLVED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00791212;
90% Identity
iTF_00791212;
80% Identity
-