Basic Information

Insect: Heliothis virescens
Gene Symbol: -
Assembly: GCA_002382865.1
Location: NWSH01000155.1:67253-114559[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.1 64 4.1 1.9 2 23 490 511 489 511 0.91

2 19 0.03 1.8 8.9 0.1 1 23 521 544 521 544 0.95

3 19 0.044 2.6 8.4 2.1 1 21 667 687 667 688 0.94

4 19 0.03 1.8 8.9 3.8 2 23 751 772 750 772 0.95

5 19 0.61 36 4.8 1.3 1 23 784 808 784 808 0.90

6 19 0.00011 0.0067 16.6 0.3 2 23 815 838 814 838 0.97

7 19 0.12 7.3 7.0 0.3 1 23 844 866 844 866 0.93

8 19 0.49 29 5.1 0.5 2 19 882 899 882 902 0.90

9 19 0.038 2.2 8.6 0.2 1 23 981 1003 981 1003 0.97

10 19 1.7 1e+02 3.4 7.2 1 23 1010 1032 1010 1032 0.95

11 19 0.0012 0.07 13.4 1.8 1 23 1074 1097 1074 1097 0.95

12 19 0.0002 0.012 15.8 0.7 1 23 1104 1127 1104 1127 0.98

13 19 0.0048 0.29 11.4 0.2 2 23 1149 1171 1148 1171 0.96

14 19 0.0023 0.14 12.4 5.0 3 23 1197 1218 1196 1218 0.95

15 19 0.00026 0.015 15.4 1.2 1 23 1233 1255 1233 1255 0.96

16 19 0.31 19 5.7 0.1 1 14 1261 1274 1261 1275 0.88

17 19 0.00026 0.015 15.4 1.2 1 23 1290 1312 1290 1312 0.96

18 19 0.0001 0.0062 16.7 0.1 1 23 1318 1340 1318 1340 0.97

19 19 0.00033 0.019 15.1 0.7 3 23 1348 1369 1346 1369 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.1	64	4.1	1.9	2	23	490	511	489	511	0.91
2	19	0.03	1.8	8.9	0.1	1	23	521	544	521	544	0.95
3	19	0.044	2.6	8.4	2.1	1	21	667	687	667	688	0.94
4	19	0.03	1.8	8.9	3.8	2	23	751	772	750	772	0.95
5	19	0.61	36	4.8	1.3	1	23	784	808	784	808	0.90
6	19	0.00011	0.0067	16.6	0.3	2	23	815	838	814	838	0.97
7	19	0.12	7.3	7.0	0.3	1	23	844	866	844	866	0.93
8	19	0.49	29	5.1	0.5	2	19	882	899	882	902	0.90
9	19	0.038	2.2	8.6	0.2	1	23	981	1003	981	1003	0.97
10	19	1.7	1e+02	3.4	7.2	1	23	1010	1032	1010	1032	0.95
11	19	0.0012	0.07	13.4	1.8	1	23	1074	1097	1074	1097	0.95
12	19	0.0002	0.012	15.8	0.7	1	23	1104	1127	1104	1127	0.98
13	19	0.0048	0.29	11.4	0.2	2	23	1149	1171	1148	1171	0.96
14	19	0.0023	0.14	12.4	5.0	3	23	1197	1218	1196	1218	0.95
15	19	0.00026	0.015	15.4	1.2	1	23	1233	1255	1233	1255	0.96
16	19	0.31	19	5.7	0.1	1	14	1261	1274	1261	1275	0.88
17	19	0.00026	0.015	15.4	1.2	1	23	1290	1312	1290	1312	0.96
18	19	0.0001	0.0062	16.7	0.1	1	23	1318	1340	1318	1340	0.97
19	19	0.00033	0.019	15.1	0.7	3	23	1348	1369	1346	1369	0.95

Sequence Information

Coding Sequence: ATGACGGAGACACAACCCCCACTCATCCTCTGCATGGAGAATGCAACAGGTGAAGAAGTAGCTCTCAGGGTGGAACCTGATGATAACTTTCAGATGTTCCTGGATAAGGCTCGGGGACTCCTAGGCTTCGATGTCGACCTAAACTCCATAACCAGAAACCAGCCAGTTTCCCTATCCGAGAACATATACCAATTTCTATTAAATACTGAACAAAATTTACAAGCGGACGACCTCGCACAAAACTTTGATCAAATGTTGGACAGCAATGATGGGGCCAACGATTTGGTCTACATATTGGACGATGGCACACAGATAAGGGCATCTCAAATACATTTCGATAATGATGATCCCCTAATTGACTTGACAGCTGAAAAAATACCCTTTGTAAAGTATGCTGACGACGTTAATGACCCTGAAATAGATGCAATTCATGCGGAAACGAAGAAAATTAACATAGTCGAAAGTCCTGTTTCGCGATGGTCCAGCAAAAATTCTAGTCCAAAATGCAGTTTCGTCAATTCTTTACCTTTCAAACTAGTCTGCAATAACACATCAGGTTTCGAAGCGCAGTTCACGAAGTACTTAGAAGCCAATACTTCTAAAACGTACGCGACTTTGAACCCTGTTACTAGTCGGAATAAGTCTCCAAAGAGCTTGATCAAAGATAATTTTAAGAACTACGATGATAGTTATCAGAGGAACGACAATTTGGCTTATACTAGGGAGGAGATTTTGAACATGTTCAAGGATTCCCCGATGACGTCCTTGCCTTATGACCAGGGTTATAGTGAGAGGAGACATGTAAGGAAGACCGATCCTTCAAGACTTGTCCATAAGAGTTGGACGAAGCCCATTTCCTATATCGATATCGATGGGGTTCTAATAGGAGAGACTGAGAGTCAGATTTGTTTCATTTGCGGAAAGCATGTCGATAATAGTGTCGATAAACTGTATCTCTTTGATAACGAAGACCAGAGAGTACACAGGTGTTCTCCACAGAAGAAAATGTCGACGCAACTCAAGATTATATGCGAATGTTGTCTGAACGAAAATTTTAAACCTTGCCGGATGAAAAGTGCGAACCAATTTTTGAATCCGGACGAGTTTTTGGTGATTCGCAATAATCAACAATATATATTTCAGAagattaaaaactttaattttactcATTTAGGAAAGCATAAAGATATGATGAGTAAAGATTCGAAGTTGGATAAAGAGGAATTTGTGAAGGTCGAAATTGGTTCTGATGGTGAGATCATTACTAAACCCATAGACAATGATCCGAGGTCCGATGACGTCATAATTGTTAAAGATGAAAAGAAGGACGGTAGTTCGAGTGATGTAGAGATTGTGGAACCGGAACCGGAGATAGACAACATCATAGACAATTTAGAAGAGGCTGATGAGGAAGTGAAGGAATTTTTGGGGAAATATCAATGTGATAATCGTGAAGTTACTGAGTTGAAATGCAGATTTTGCGAGCATGTATTCCCGGACTTGTCAGAAGTGATGGTGCATTGTGAGACCCATAAACATGACTTAGAAGATGGCGATGTGTTCCCATGCCCTCTGTGTTATTATGGTTATGCAAATTTAAAATGGCTGAAAGGACATCTGAAGGCAGCTCACGAGAAATCCGAAcctcacaaaaatttaaaagatgATAATGAACaaatgaaagaagaaaataaagAAGAACAGGATCCATCACCTAAGACATCGTCTCCTATAGCTACACGTACTAGGAGTTCTAGCAAAAAAGGAGATGAAGATAAaaaagatgACGAAGATTGTGAAGAAAAGAATGAACCTAGTAAAGAGGCGCCGAAGCCACCCATCATAAAAACGGAGGTTAAGCAAGAATGCGTGGATAGCAGCGAGGATGAGATCTGGATCGTGCAAACAGCTGATGTGGAAGCTTCGCAGGAGTTGCAGAAATTACTCTGTGTTGCTAAGggcaAAGAAGATGGACAAGAGGGTGACACTCCGAAGACACACAAATGTTTTAATTGCAGTCAAATATTTGCAAGTGCGGAAGGTTTGACAAACCATAGATGTAGAAGACGTGGTCGGAAGCGGAAATCAAAGGATTTAGGAAACCTTATTTGTATACCTACAGAGGAAGATTTCTTGAAGAGAGCTCAAGGACGTCCAAGACCAGTAGATTCAGCGATAGACAGTGATCTTCTCGTTATGCGTCCTAGAAAACGCCGCAGCCGGGAACCGACGTCCAACCCTCAAGTAGTCACATGTCATAATTGCAACGAGTCATTCACTTCCAAAGTTAGGCTTAAGTTtcatatGCAGTTTCACGAAACCACGAACCTGATCCGTCCTGACGGTCGGTACACCTGCACCGAATGCTCAGGAGCCACCTTCTCCACGGAGACGGAGCTGTTCGACCACGTGCACTTCCAGCATGACAAGCACAAGCGCTGGCAGTGCCCTGTCGACGGCTGCGGGAAGACCTTCTTCCTCAGGGCAACACTAACGAAGCACAGTCGCACGCACACAGACACACGTCGCTATGTGTGTGTAACGTGTGACAAGAGGTTCTTAGACAAACAGACTTTGGATGAGCATGGAGTTACACATTTacagATCAAACACGAAGAGGAGTTAGCtcccacactggtgcgcgtctgtgctgtgtgcactagagccttcagagaccatcgccatgcacagGAGCATGCAACAAAATCAACGGAATGCATAGAGGCGTTCGCGAACGAGCTGAAGGAGGAAGCTGAGGAGATGACGGTGCAGCTGTCTCCCACCAGCGGACTCGTCAGGCATACTGTGCAGATTGTTGAATCTCCGAAACTATCAAAGCCAATAAAACGTCAAGTATCAAACGAAGTGGGCGAGCCCTTACTGTCACAGCTGGCAGACGAAGCCAGGGCGCTCATACGAGTCGTGGAGATCGAGAAGGCTTTCCGATGTGAATATTGTGAAGATGTATTCTACTTAGAAAGCGGTTTGAACAGTCACCGCGCGATACATAAGGGCGTGAAGAACCCCTTCACTTGTCATATCTGTAAAGTCAGCTTTGCTACTTATTCCAGatgTACAACCCACAAAACCACCCACGGTTTCTACAAGCGCTCTCTAGCGGACGCCAAGAAACAGGCCGATGGGCTGACGGCTGATACTGATGGCAATCGATCAGCCACCGGCATCCTGGGCTACGGGGACTTCCCGGTAGTCAAGCATTTCTTGTGTGAGGACTGCGGTCGTTCGTACCTACACTGGACGTACCTACAAGTGCACAGGCGTATGAAACACGCCAACGAGAACTTTCTATACAAGTGCAACCAGTGTGAACTCACCTTTCCTAACAGTTGGAGCCTAGCGTACCATCGGAAGAAGGTGCACGGTAAGACAGGTCCTGATGACCCTGGCGCCACCAGCAAGATTAGCAAGGACGATTACAGGATACCATGTCGCGATTGTAACGAGGTGTTGCCAAATAAAACTGCGCTCTACAAGCATCGGAAGAAAGAGCACAGCGATAATAGCATTCGACCTAATAGTAAGCCTGGCATGTACTCTCACGAGGAGTCTAGCGGTAGCGGCGGCGCCTGTCCTCATTGCCACGCTACCTTTACGCACGCCACCGACCTGCACAAGCATGTCAAAGAAGCGCACGGCGTGGGCGGGGCGGGCTGGGCGGGCAAGCCGGGGCGGCCGCACGCGTGCCCGGTGTGCGGGCACGCGTTCCGCACGCTGTCCATGCGCAACGAGCACCTGCGCGTGCACACGGGCGAGCGCCCCTTCCCCTGTGACGTGTGCGGAGTCGCCTTCCGAAGAGAAGCGCACGGCGTGGGCGGGGCGGGCTGGGCGGGCAAGCCGGGGCGGCCGCACGCGTGCCCGGTGTGCGGGCACGCGTTCCGCACGCTGTCCATGCGCAACGAGCACCTGCGCGTGCACACGGGCGAGCGCCCCTTCCCCTGTGACGTGTGCGGAGTCGCTTTCCGAAGGTCCACAGCGATGAGGAACCACCGGCTCATTCACACGGGGGTCCGCGCGTGGGCGTGCGGCCGGTGTCCCAAGCGGTTCCGCATACGATCCGACTTGCGCACTCATTTGAGACTGAAGCACCCCGCTACTATTGTCGTTGTTGAGatgGAAGGCTTAAACCCGACTTCTGAAGATGTTATGAAGACGCTGGCAGAACAGAACGTTCCTCATGACAAGCTCATTGAAATAACTAAGATGTCCTTCGCAAAGGGCACGACAAGCGTGATACCGTCGTGCGCGCGCGCACTGTCGACGCTGAGCACGGTGCCTCGCACGCACGTCGCCTGCATCAAGCCAACACCTGCACTCATGTTGGATGAATTCCAGCCTGCCCGTCGTGGTCGGGGAATTGCTAAAAACCCACGCCGCCCCAAAATATTGCAGCGAGGAGAAACTCAAGATCCTTCTGGCTACCCCATTGTCAGTGGAGAGGAGTTATCAGACTTGAACGTGCAGTTACTGCTGCGAGACGGCGTGTTAGTCAACGGTAACCAAATGGTTCAACTGCAGCTAGATGATCCTATGCTCATGGAATGA
Protein Sequence: MTETQPPLILCMENATGEEVALRVEPDDNFQMFLDKARGLLGFDVDLNSITRNQPVSLSENIYQFLLNTEQNLQADDLAQNFDQMLDSNDGANDLVYILDDGTQIRASQIHFDNDDPLIDLTAEKIPFVKYADDVNDPEIDAIHAETKKINIVESPVSRWSSKNSSPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEANTSKTYATLNPVTSRNKSPKSLIKDNFKNYDDSYQRNDNLAYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKSWTKPISYIDIDGVLIGETESQICFICGKHVDNSVDKLYLFDNEDQRVHRCSPQKKMSTQLKIICECCLNENFKPCRMKSANQFLNPDEFLVIRNNQQYIFQKIKNFNFTHLGKHKDMMSKDSKLDKEEFVKVEIGSDGEIITKPIDNDPRSDDVIIVKDEKKDGSSSDVEIVEPEPEIDNIIDNLEEADEEVKEFLGKYQCDNREVTELKCRFCEHVFPDLSEVMVHCETHKHDLEDGDVFPCPLCYYGYANLKWLKGHLKAAHEKSEPHKNLKDDNEQMKEENKEEQDPSPKTSSPIATRTRSSSKKGDEDKKDDEDCEEKNEPSKEAPKPPIIKTEVKQECVDSSEDEIWIVQTADVEASQELQKLLCVAKGKEDGQEGDTPKTHKCFNCSQIFASAEGLTNHRCRRRGRKRKSKDLGNLICIPTEEDFLKRAQGRPRPVDSAIDSDLLVMRPRKRRSREPTSNPQVVTCHNCNESFTSKVRLKFHMQFHETTNLIRPDGRYTCTECSGATFSTETELFDHVHFQHDKHKRWQCPVDGCGKTFFLRATLTKHSRTHTDTRRYVCVTCDKRFLDKQTLDEHGVTHLQIKHEEELAPTLVRVCAVCTRAFRDHRHAQEHATKSTECIEAFANELKEEAEEMTVQLSPTSGLVRHTVQIVESPKLSKPIKRQVSNEVGEPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNSHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADGLTADTDGNRSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWSLAYHRKKVHGKTGPDDPGATSKISKDDYRIPCRDCNEVLPNKTALYKHRKKEHSDNSIRPNSKPGMYSHEESSGSGGACPHCHATFTHATDLHKHVKEAHGVGGAGWAGKPGRPHACPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRREAHGVGGAGWAGKPGRPHACPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEMEGLNPTSEDVMKTLAEQNVPHDKLIEITKMSFAKGTTSVIPSCARALSTLSTVPRTHVACIKPTPALMLDEFQPARRGRGIAKNPRRPKILQRGETQDPSGYPIVSGEELSDLNVQLLLRDGVLVNGNQMVQLQLDDPMLME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00785432; iTF_00784636; iTF_00783797; iTF_01342430;
90% Identity: -
80% Identity: -