Basic Information

Insect: Helicoverpa assulta
Gene Symbol: -
Assembly: GCA_029618815.1
Location: CAWLCW010000022.1:5582380-5607923[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.1 1.9e+02 3.7 0.7 2 23 491 512 490 512 0.90

2 18 0.044 3.9 9.0 0.1 1 23 522 545 522 545 0.95

3 18 0.063 5.6 8.5 2.1 1 21 668 688 668 689 0.94

4 18 0.044 3.9 9.0 3.8 2 23 752 773 751 773 0.95

5 18 0.45 40 5.8 1.9 1 23 785 809 785 809 0.90

6 18 0.00016 0.014 16.6 0.3 2 23 816 839 815 839 0.97

7 18 0.18 16 7.1 0.3 1 23 845 867 845 867 0.93

8 18 0.0042 0.37 12.2 2.9 1 23 873 895 873 895 0.98

9 18 0.71 63 5.1 0.5 2 19 906 923 906 926 0.90

10 18 0.054 4.8 8.7 0.2 1 23 1005 1027 1005 1027 0.97

11 18 2.5 2.2e+02 3.4 7.2 1 23 1034 1056 1034 1056 0.95

12 18 0.0017 0.15 13.4 1.8 1 23 1098 1121 1098 1121 0.95

13 18 0.00028 0.025 15.8 0.7 1 23 1128 1151 1128 1151 0.98

14 18 0.019 1.6 10.1 0.2 2 23 1173 1195 1172 1195 0.96

15 18 0.0033 0.3 12.5 5.0 3 23 1221 1242 1220 1242 0.95

16 18 0.00042 0.037 15.3 2.0 1 23 1258 1280 1258 1280 0.98

17 18 0.00015 0.013 16.7 0.1 1 23 1286 1308 1286 1308 0.97

18 18 0.00047 0.042 15.1 0.7 3 23 1316 1337 1314 1337 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.1	1.9e+02	3.7	0.7	2	23	491	512	490	512	0.90
2	18	0.044	3.9	9.0	0.1	1	23	522	545	522	545	0.95
3	18	0.063	5.6	8.5	2.1	1	21	668	688	668	689	0.94
4	18	0.044	3.9	9.0	3.8	2	23	752	773	751	773	0.95
5	18	0.45	40	5.8	1.9	1	23	785	809	785	809	0.90
6	18	0.00016	0.014	16.6	0.3	2	23	816	839	815	839	0.97
7	18	0.18	16	7.1	0.3	1	23	845	867	845	867	0.93
8	18	0.0042	0.37	12.2	2.9	1	23	873	895	873	895	0.98
9	18	0.71	63	5.1	0.5	2	19	906	923	906	926	0.90
10	18	0.054	4.8	8.7	0.2	1	23	1005	1027	1005	1027	0.97
11	18	2.5	2.2e+02	3.4	7.2	1	23	1034	1056	1034	1056	0.95
12	18	0.0017	0.15	13.4	1.8	1	23	1098	1121	1098	1121	0.95
13	18	0.00028	0.025	15.8	0.7	1	23	1128	1151	1128	1151	0.98
14	18	0.019	1.6	10.1	0.2	2	23	1173	1195	1172	1195	0.96
15	18	0.0033	0.3	12.5	5.0	3	23	1221	1242	1220	1242	0.95
16	18	0.00042	0.037	15.3	2.0	1	23	1258	1280	1258	1280	0.98
17	18	0.00015	0.013	16.7	0.1	1	23	1286	1308	1286	1308	0.97
18	18	0.00047	0.042	15.1	0.7	3	23	1316	1337	1314	1337	0.95

Sequence Information

Coding Sequence: ATGGCAGAAACGCAGCCCCCTCTGATTCTCTGCATGGAGAATGCAACAGGAGAAGAAGTAGCTCTCAGGGTGGAGCCTGATGATAACTTCCAGATGTTCTTAGATAGAGCTCGGGGACTCCTAGGCTTCGAAGTCGACTTAAACTCCATTACCCGAAACCAGCCAGTTTCGCTATCCGAAAACATATACCAATTCCTATTAAATACGGAACAAAATTTACAAGCGGACGACCTCACGCAAAACTTTGATCAAatgttggacaccaatgacGGGGCCAACGATTTGGTCTATATATTGGACGATGGCACTCAGATTAGGGCATCACAAATACATTTTGACAATGATGATCCCTTAATAGATTTAACAGCTGAAAAAATACCCTTTGTAAAGTACGCCGATGATGTTAATGATCCTGAAATAGATACAATACATGCGGAAaccaagaaaattaatattatcgAAAGTCCTGTTTCAAGATGGTCCAGCAAAAATTCTAGTCCCAAATGCAGTTTTGTTAATTCTTTACCCTTTAAACTAGTTTGCAATAACACATCGGGTTTCGAAGCTCAGTTCACTAAATATTTAGAAGCTAACAATTCTAAAACGTACGCGACTTTGAACCCTGTAACTAGTCGAAATAAGTCTCCAAAGAGCTTGATCAAGGATAATTTTAAGAACTATGATGATAGTTACCAGAGGAATGATAATTTGGCCTATACTAGAGAGGAGATTTTGAACATGTTTAAGGACTCTCCAATGACGTCTTTGCCTTATGACCAAGGGTACAGCGAGAGAAGACATGTTAGGAAGACTGATCCTTCTAGACTCGTGCATAAGAGTTGGACTAAACCAATCTCCTATATCGATATCGATGGCGTCCTTATAGGAGAAACAGAGAGTCAGATATGTTTCATTTGTGGAAAACATGTCGATAACAGTGTCGATAAACTGTACCTCTTTGATAACGAAGACCAGAGAGTACACAGGTGTTCTCCTCAAAAGAAAATGTCGACACAATTGAAGATTATATGTGAATGCTGTCTTAACGAAAATTTTAAACCTTGCCGGATGAAGAGTGCGAACCAATTTTTGAATCCGGACGAATTTCTGGTCATACGTAACAATCAGCAGTATATATTTCAGaaggttaaaaatttcaatttcaCCCATTTAGGGAAACATAAAGATATGATGAGTAAACAGGATTCCAAGTTAGACAAGGAAGAATTCGTGAAAGTCGAAATTGGTTCTGACGGTGAGATTATAACCAAACCTATAGACAATGATCCGAGGTCTGATGATGTCATAGTTGTGAAAGATGAGAAGAAGGACGGTAGTTCGAGTGATGTAGAGATTGTCGAACCGGAACCGGAGATAGATAATATCATAGACAATCTGGAAGAGGCTGATGAGGAAGTGAAGGAGTTTTTGGGGAAATATCAGTGTGATAATAGTGAAGTTACTGAGTTAAAATGCAGATTTTGCGAGCAAATATTCCCGGATTTGTCGGAAGTGCTGGTTCACTGTGAAACACATAAACATGACTTGGAAGATGGCGATGTTTTCCCATGCCCACTGTGTTACTATGGCTACGCAAATTTAAAATGGCTGAAAGGTCACCTGAAGGCAGCTCACGAGAAATCCGAatccaataataaattaaaagatgAAAATGAACCaatgaaacaagaaaataaagATGAACAGGAGACATCGCCTAAAAGGTCGTCCCCCATAGCTAATCGTACTAGAAGTTCAAGCAAGAAAGGAGATGGTGATAGAAAAGATGACGAAGATTCAGAAGAAAAGAATGAACCTAGTAAAGATGCGCCAAAGCCACCCATCATAAAAACTGAAGTTAAGCAGGAATGTGTAGACAGTAGTGAGGATGAGATCTGGATCGTTCAAACGGCTGACGTGGAAGCAACGCAAGAGTTGCAGAAATTACTCTGTGTTGCCAAGGGCAAAGAAGACGGAGAAGAGGGCGAAAATCCGAAGACACACAAATGCTTTAATTGCAGTCAAATATTCGCTAGTGCAGAAGGTTTGACAAACCATAGATGTCGAAGGCGTGGTCGGAAACGGAAATCTAAAGATCTGGGCAATCTTATTTGTATACCTACAGAAGAAGATTTCttgaagAGAGCTCAAGGTCGACCAAGACAAGTAGAATCGTCCATAGACAGCGATCTTCTCGTTATGCGTCCTAGAAAACGCCGCAGCCGGGAACCGACCTCCAACCCTCAAGTGGTTACATGTCATAATTGTAATGAGTCATTCACTTCGAAAGTTAGACTTAAGTTtcatatGCAGTTCCACGAATCCACAAACCTGATACGTCCGGACGGGCGCTACACTTGCACCGAGTGTTCAGGAACCACCTTCTCCACGGAGACGGAGCTGTTCGACCACGTGCACTTCCAGCATGACAAGCACAAGCGCTGGCAGTGCCCCGTCGACGGCTGCGGGAAGACCTTCTTCCTCAGGGCGACTCTAACGAAACACAGTCGCACTCACACAGACACGCGTCGCTACGTGTGCGTCACGTGCGACAAGCGGTTCTTAGACAAACAGACTTTGGACGAGCATGGAGTCACTCATTTACAGATCAAACCCTTCCAATGCCACATATGCCTAAAGCAGTTGACCCGTCGCTCTCGCCTCCGAATGCACGTGAGAGCACACGAAGAGGAACTGGCTCCAACACTGGTGCGAGTCTGTGCTGTGTGCACTAGAGCCTTCAGAGACCATCGTCATGCACAGGAGCATGCTACAAAATCAACGGAATGCATAGAGGCGTTTGCCAATGAGCTGAAGGAGGAAGCCGAAGAGATGACCGTCCAGCTGTCTCCCACCAGCGGCCTTGTAAGACATACTGTGCAAATTGTTGAGTCTCCGAAACTATCGAAACCAATAAAACGTCAGGTATCGAATGAAGTGGGCGAGCCGCTACTGTCTCAGCTGGCAGACGAAGCCAGGGCGCTCATACGAGTCGTCGAGATCGAGAAGGCGTTCCGATGCGAGTACTGTGAAGACGTGTTCTACTTAGAAAGCGGATTGAACAGTCACCGCGCGATACACAAGGGTGTGAAGAACCCTTTCACCTGCCACATCTGCAAAGTTAGCTTTGCCACTTATTCTAgATGTACAACACACAAAACAACCCACGGTTTCTACAAGCGCTCTCTAGCGGACGCTAAGAAACAGGCCGATGGTCTGACGGTCGATACCGACGGCAATCGATCAGCCACCGGCATCCTCGGCTACGGGGACTTTCCCGTGGTCAAGCACTTCTTGTGTGAGGATTGCGGTCGATCCTACCTGCACTGGACGTACCTACAAGTGCACAGACGCATGAAACACGCGAACGAGAACTTTCTCTACAAATGTAACCAGTGTGAACTCACCTTTCCTAACAGTTGGAGTCTAGCGTATCATCGTAAGAAGGTGCACGGGAAGACCGGGCCTGATGACCCCGGAGCCACCAGCAAGATTAGCAAGGATGATTACAGGATACCATGTCGCGATTGTAGCGAGGTGCTACCAAATAAAACTGCGCTGTACAAGCATCGGAAGAAAGAGCACAGTGACAATACTATTCGTCCAAGCAGTAAGCCTGgCATGTACTCTCACGAGGAGTCTAGCGGCGGTGGCGGGGCCTGCCCTCACTGTCACGCTACCTTCACGCATGCCACTGACCTGCATAAACATGTCAAAGAAGCCCACGGCTCATCTAACACAAGCTGGTCGAACAACAAGCCGGGCCGTCCACACACGTGCCCGGTGTGCGGCCACGGGTTCCGCACGCTCTCCATGCGGAACGAACATCTGCGCGTCCACACGGGTGAACGCCCCTTCCCTTGTGATGTCTGTGGAGTCGCTTTCAGAAGGTCCACAGCGATGAGGAACCACCGGCTCATTCACACGGGGGTCCGCGCGTGGGCCTGCGGACGCTGTCCCAAACGGTTTCGCATACGATCCGACTTGCGGACGCATTTGAGACTGAAGCATCCAGCTACTATTGTTGTTGTTGAGATAGAAGGCCTAAATCCGTCTTCTGAAGATGTGATGAAAACCCTTTCAGAACAGAACGTCCCTCATGACAAGCTCATTGAGATAACTAAGATGTCCTTTGCAAAGGGCACGACAAGCGTGATACCGTCATGCGCCCGCGCGCTGTCGGCGCTGAGCGCGGTGCCGCGGACCCATGTCGCCTGCATCAAGCCCGCGCCCGCTAACATGTTGGACGAATTCCAACCCGCTCGTCGTGGTCGCGGTATAGCTAAGAACCCGCGCCGCCCCAAGATACTGCAGCGGGGAGACTCGCAGGATCCTTCTGCTTATCCTATTGTTAGTGGAGAGGAGTTATCAGACTTAAACGTGCAGTTACTGCTCCGGGATGGCGTCCTAGTTAACGGTAACCAAATGGTTCAACTGCAACTGGACGACCCCATGCTCATGGAatga
Protein Sequence: MAETQPPLILCMENATGEEVALRVEPDDNFQMFLDRARGLLGFEVDLNSITRNQPVSLSENIYQFLLNTEQNLQADDLTQNFDQMLDTNDGANDLVYILDDGTQIRASQIHFDNDDPLIDLTAEKIPFVKYADDVNDPEIDTIHAETKKINIIESPVSRWSSKNSSPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEANNSKTYATLNPVTSRNKSPKSLIKDNFKNYDDSYQRNDNLAYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKSWTKPISYIDIDGVLIGETESQICFICGKHVDNSVDKLYLFDNEDQRVHRCSPQKKMSTQLKIICECCLNENFKPCRMKSANQFLNPDEFLVIRNNQQYIFQKVKNFNFTHLGKHKDMMSKQDSKLDKEEFVKVEIGSDGEIITKPIDNDPRSDDVIVVKDEKKDGSSSDVEIVEPEPEIDNIIDNLEEADEEVKEFLGKYQCDNSEVTELKCRFCEQIFPDLSEVLVHCETHKHDLEDGDVFPCPLCYYGYANLKWLKGHLKAAHEKSESNNKLKDENEPMKQENKDEQETSPKRSSPIANRTRSSSKKGDGDRKDDEDSEEKNEPSKDAPKPPIIKTEVKQECVDSSEDEIWIVQTADVEATQELQKLLCVAKGKEDGEEGENPKTHKCFNCSQIFASAEGLTNHRCRRRGRKRKSKDLGNLICIPTEEDFLKRAQGRPRQVESSIDSDLLVMRPRKRRSREPTSNPQVVTCHNCNESFTSKVRLKFHMQFHESTNLIRPDGRYTCTECSGTTFSTETELFDHVHFQHDKHKRWQCPVDGCGKTFFLRATLTKHSRTHTDTRRYVCVTCDKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPTLVRVCAVCTRAFRDHRHAQEHATKSTECIEAFANELKEEAEEMTVQLSPTSGLVRHTVQIVESPKLSKPIKRQVSNEVGEPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNSHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADGLTVDTDGNRSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWSLAYHRKKVHGKTGPDDPGATSKISKDDYRIPCRDCSEVLPNKTALYKHRKKEHSDNTIRPSSKPGMYSHEESSGGGGACPHCHATFTHATDLHKHVKEAHGSSNTSWSNNKPGRPHTCPVCGHGFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEIEGLNPSSEDVMKTLSEQNVPHDKLIEITKMSFAKGTTSVIPSCARALSALSAVPRTHVACIKPAPANMLDEFQPARRGRGIAKNPRRPKILQRGDSQDPSAYPIVSGEELSDLNVQLLLRDGVLVNGNQMVQLQLDDPMLME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00786223;
90% Identity: iTF_00785432;
80% Identity: -