Basic Information

Insect: Helicoverpa zea
Gene Symbol: -
Assembly: GCA_002150865.1
Location: KZ117051.1:9180-31410[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.5 1.1e+02 3.7 0.7 2 23 491 512 490 512 0.90

2 18 0.025 1.8 9.3 0.1 1 23 522 545 522 545 0.95

3 18 0.26 18 6.1 2.2 1 21 668 688 668 689 0.94

4 18 0.031 2.2 9.0 3.8 2 23 752 773 751 773 0.95

5 18 0.33 23 5.8 1.9 1 23 785 809 785 809 0.90

6 18 0.00012 0.0082 16.6 0.3 2 23 816 839 815 839 0.97

7 18 0.13 9 7.1 0.3 1 23 845 867 845 867 0.93

8 18 0.003 0.21 12.2 2.9 1 23 873 895 873 895 0.98

9 18 4.5 3.1e+02 2.2 0.1 2 15 906 919 906 922 0.84

10 18 0.039 2.8 8.7 0.2 1 23 991 1013 991 1013 0.97

11 18 1.8 1.3e+02 3.4 7.2 1 23 1020 1042 1020 1042 0.95

12 18 0.0012 0.086 13.4 1.8 1 23 1084 1107 1084 1107 0.95

13 18 0.0002 0.014 15.9 0.7 1 23 1114 1137 1114 1137 0.98

14 18 0.013 0.95 10.1 0.2 2 23 1159 1181 1158 1181 0.96

15 18 0.0024 0.17 12.5 5.0 3 23 1207 1228 1206 1228 0.95

16 18 0.00031 0.022 15.3 2.0 1 23 1244 1266 1244 1266 0.98

17 18 0.00011 0.0076 16.7 0.1 1 23 1272 1294 1272 1294 0.97

18 18 0.00034 0.024 15.2 0.7 3 23 1302 1323 1300 1323 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.5	1.1e+02	3.7	0.7	2	23	491	512	490	512	0.90
2	18	0.025	1.8	9.3	0.1	1	23	522	545	522	545	0.95
3	18	0.26	18	6.1	2.2	1	21	668	688	668	689	0.94
4	18	0.031	2.2	9.0	3.8	2	23	752	773	751	773	0.95
5	18	0.33	23	5.8	1.9	1	23	785	809	785	809	0.90
6	18	0.00012	0.0082	16.6	0.3	2	23	816	839	815	839	0.97
7	18	0.13	9	7.1	0.3	1	23	845	867	845	867	0.93
8	18	0.003	0.21	12.2	2.9	1	23	873	895	873	895	0.98
9	18	4.5	3.1e+02	2.2	0.1	2	15	906	919	906	922	0.84
10	18	0.039	2.8	8.7	0.2	1	23	991	1013	991	1013	0.97
11	18	1.8	1.3e+02	3.4	7.2	1	23	1020	1042	1020	1042	0.95
12	18	0.0012	0.086	13.4	1.8	1	23	1084	1107	1084	1107	0.95
13	18	0.0002	0.014	15.9	0.7	1	23	1114	1137	1114	1137	0.98
14	18	0.013	0.95	10.1	0.2	2	23	1159	1181	1158	1181	0.96
15	18	0.0024	0.17	12.5	5.0	3	23	1207	1228	1206	1228	0.95
16	18	0.00031	0.022	15.3	2.0	1	23	1244	1266	1244	1266	0.98
17	18	0.00011	0.0076	16.7	0.1	1	23	1272	1294	1272	1294	0.97
18	18	0.00034	0.024	15.2	0.7	3	23	1302	1323	1300	1323	0.95

Sequence Information

Coding Sequence: ATGACAGAGACGCAGCCCCCTCTGATTCTTTGCATGGAGAATGCAACTGGTGAAGAAGTTGCTCTCAGGGTGGAACCTGATGATAACTTCCAGATGTTCCTAGATAAAGCTCGGGGACTCCTAGGCTTCGAAGTCGACTTAAACTCCATTACCAGAAACCAGCCAGTTTCCCTATCCGAAAACATATACCAATTCCTATTAAATACAGAACAAAATTTACAAGCAGACGACCTCACACAAAACTTTGATCAAatattggacaccaatgatGGCGCCAATGATTTGGTCTATATATTGGACGATGGCACTCAGATTAGAGCATcacaaatacattttgacaaTGATGATCCCTTAATAGACTTAACAGCTGAAAAAATCCCTTTTGTAAAATACGCCGATGATGTTAACGATCCGGAAATAGATACAATACATGcggaaacaaagaaaattaatatagtaGAAAGTCCTGTTTCAAGATGGTCCAGCAAAAATTCGAGTCCAAAATGCAGTTTTGTTAATTCCTTAccttttaaattagtttgcaaTAACACATCGGGTTTCGAAGCTCAATTCACTAAATACTTAGAAGCTAACAATTCTAAAACTTACGCGACTTTGAACCCTGTGACTAGTCGGAATAAGTCTCCTAAAAGCttgataaaagataattttaagaaCTACGATGACAGTTACCAGAGGAATGATAATTTGGCTTATACTAGAGAGGAgattttaaacatgtttaaagACTCCCCTATGACTTCTCTGCCTTATGACCAAGGGTACAGCGAGAGAAGACATGTTAGAAAGACTGATCCTTCAAGACTCGTGCATAAGAGTTGGACTAAACCAATCTCCTATATCGATATCGATGGAGTACTTATAGGAGAAACTGAGAGTCAAATATGTTTCATTTGTGGAAAACATGTCGATAACAGTGTCGATAAACTGTACCTCTTTGATAACGAAGACCAGAGAGTACATAGGTGTTCTCCTCAAAAGAAAATGTCGACGCAATTAAAGATTATATGTGAATGCTGTCTTAACGAAAATTTTAAACCTTGCCGGATGAAAAGTGCTAACCAATTTTTGAATCCCGACGAATTTCTGGTCATACGTAACAATCAGCAGTATATTTTTCAGAAGGtcaaaaatttcaatttcaccCATTTAGGGAAGCATAAAGATATGATGAGTAAACAGGATTCTAAGTTAGATAAGGAAGAATTTGTGAAAGTCGAAATTGGTTCTGACGGTGAGATTATAACGAAACCAATAGACAATGATCCGAGGTCTGATGATGTCATAGTCGTCAAAGATGAGAAGAAGGACGGTAGTTCCAGTGATGTTGAGATTGTGGAGCCGGAACCGGAGATAGATAATATCATAGACAATCTGGAGGAGGCTGATGAGGAAGTGAAGGAGTTTTTGGGGAAGTACCAGTGTGATAATAGTGAAGTTACTGAGTTGAAATGCAGATTTTGCGAGCAAATATTCCCAGATTTGTCAGAAGTGCTGGTGCACTGTGAAACACATAAACATGATTTGGAAGATGGCGATGTTTACCCATGCCCACTTTGTTTCTATGGTTACGCAAATTTAAAATGGCTAAAAGGTCATCTGAAGGCAGCTCACGAGAAATCCGAACCtagtaaacatttaaaagatgaaaatgagcaaatgaaacaagaaaataaagATGAACAAGAAACATCGCCTAATAAGTCGTCCCCCATAGCTACTCGTACTAgaagttcaaacaaaaaagatgGTGAtagaaaagaTGAAGACGAAGATTCTGAAGAAAAGAATGAACCTAGTAAAGATGcgCCAAAGCCACCCATCATAAAAACGGAGGTTAAGCAGGAGTGCCTAGACAGCAGTGAGGATGAGATCTGGATCGTTCAAACGGCTGATATGGAAGCCACGCAAGAGTTGCAGAAATTACTCTGTGTTGCCAAGGGCAAAGAAGATGGACAGGATGGTGATACTTCGAAAACACACAAATGTTTTAATTGcagTCAAATATTCGCAAGTGTAGAGGGTTTGACGAACCATAGATGTCGAAGGCGTGGTCGAAAAAGGAAATCTAAAGATCTGGGCAATCttatttgtatacctactgAAGAAGATTTCTTGAAGAGAGCTCAAGGACGACCAAGACAAGTAGAATCATCCATAGACAGCGATCTTCTCGTTATGCGTCCTAGAAAACGCCGCAGCCGGGAACCGACCTCCAACCCTCAAGTGGTGACTTGTCATAATTGCAACGAGTCATTTACTTCGAAAGTTAGGCTGAAGTTTCATATGCAGTTCCACGAATCCACAAACCTGATACGCCCAGACGGCCGCTACACTTGCACCGAGTGTTCAGGAACCACCTTTTCCACGGAGACGGAGCTGTTCGACCACGTGCACTTCCAGCATGACAAGCACAAGCGCTGGCAGTGTCCCGTCGACGGCTGCGGGAAGACCTTCTTCCTCAGGGCGACTCTAACGAAACACAGTCGCACTCACACAGACACGCGTCGCTATGTGTGCGTCACGTGCGACAAGCGGTTCTTAGACAAACAGACTTTGGACGAGCATGGAGTCACACATTTACAGATCAAACCTTTCCAATGCCACATATGTCTAAAGCAGTTGACCCGTCGCTCTCGTCTCCGCATGCACGTGAGAGCACACGAAGAGGAACTGGCTCCTACACTGGTGCGAGTCTGTGCTGTGTGCACTAGGGCTTTCAGAGACCATCAGGCGTTTGCCAACGAGCTGAAGGAGGAAGCCGAAGAGATGACTGTTCAGCTGTCTCCCACCAGCGGCCTTGTTAGACATACCGTGCAGATTGTTGAGTCCCCAAAACTATCGAAACCAATAAAACGTCAGGTATCGAATGAAGTGGGCGAGCCGCTACTGTCTCAGCTGGCAGACGAAGCCAGGGCGCTTATACGAGTCGTCGAGATCGAGAAGGCGTTCCGATGCGAGTACTGTGAAGACGTTTTCTACTTAGAAAGTGGATTGAACAGTCACCGCGCGATACACAAGGGTGTGAAAAACCCTTTCACTTGCCACATCTGTAAAGTTAGCTTTGCTACTTATTctagGTGTACAACCCACAAAACTACCCACGGTTTCTACAAGCGCTCTCTAGCTGACGCTAAGAAACAGGCCGATGGGCTGACGGCCGATACCGACGGCAATCGATCAGCCACCGGCATCCTCGGCTACGGAGACTTTCCCGTGGTCAAGCACTTCTTGTGTGAGGATTGCGGTCGTTCCTACTTACACTGGACGTACCTACAAGTGCACAGACGCATGAAACACGCGAATGAGAACTTTCTGTACAAATGTAACCAGTGTGAACTCACCTTTCCTAACAGTTGGAGCCTAGCGTATCATCGTAAGAAGGTGCACGGGAAGACCGGGCCTGATGACCCTGGCGCCACCAGCAAGATTAGCAAGGATGATTACAGGATACCATGTCGCGATTGTAGCGAGGTGCTACCGAATAAAACTGCGCTCTACAAGCATCGGAAGAAGGAGCACAGCGATAATACTATTCGTCCTAGTAGTAAGCCTGGCATGTATTCTCATGAGGAGTCTAGCGGCGGCGGAGGTGCGTGCCCTCACTGTCACGCTACCTTCACGCATGCCACTGATCTGCATAAACATGTCAAAGAAGCACACGGCTCATCTAACGCAAGCTGGTCGAACAACAAGCCGGGCCGTCCACACACATGCCCGGTGTGCGGCCACGGGTTCCGCACGCTCTCCATGCGGAACGAACATCTGCGCGTCCACACGGGTGAACGCCCCTTCCCTTGTGATGTCTGTGGAGTCGCTTTCAGAAGGTCCACAGCTATGAGGAACCACCGGCTCATTCACACGGGGGTCCGCGCGTGGGCCTGCGGACGCTGTCCCAAACGGTTTCGCATACGATCCGACTTGCGGACGCATTTGAGACTGAAGCATCCGGCTACTATTGTTGTTGTTGAGATGGAAGGCCTAAATCCGTCGTCTGAAGATGTGATGAAAACCCTTTCAGAACAGAATGTTCCTCACGACAAGCTCATCGAGATAACTAAAATGTCCTTCGCAAAGGGCACGACAAGCGTGATACCGTCGTGCGCCCGCGCGCTGTCAGCGCTGAGCGCGGTGCCGCGCACGCACGTCGCCTGCATCAAGCCCGCGCCTTCTAACATGTtggaTGAATTCCAACCCGCTCGTCGTGGTCGCGGCATTGCCAAGAACCCGCGCCGTCCCAAGATACTGCAGCGGGGAGATTCACAGGATCCTTCTGCCTATCCTATCGTTAGTGGCGAGGAGTTATCAGACTTAAACGTTCAGTTACTACTCCGAGACGGCGTTCTAGTCAACGGTAACCAAATGGTTCAACTGCAACTAGACGACCCGATGCTCATGGAATGA
Protein Sequence: MTETQPPLILCMENATGEEVALRVEPDDNFQMFLDKARGLLGFEVDLNSITRNQPVSLSENIYQFLLNTEQNLQADDLTQNFDQILDTNDGANDLVYILDDGTQIRASQIHFDNDDPLIDLTAEKIPFVKYADDVNDPEIDTIHAETKKINIVESPVSRWSSKNSSPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEANNSKTYATLNPVTSRNKSPKSLIKDNFKNYDDSYQRNDNLAYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKSWTKPISYIDIDGVLIGETESQICFICGKHVDNSVDKLYLFDNEDQRVHRCSPQKKMSTQLKIICECCLNENFKPCRMKSANQFLNPDEFLVIRNNQQYIFQKVKNFNFTHLGKHKDMMSKQDSKLDKEEFVKVEIGSDGEIITKPIDNDPRSDDVIVVKDEKKDGSSSDVEIVEPEPEIDNIIDNLEEADEEVKEFLGKYQCDNSEVTELKCRFCEQIFPDLSEVLVHCETHKHDLEDGDVYPCPLCFYGYANLKWLKGHLKAAHEKSEPSKHLKDENEQMKQENKDEQETSPNKSSPIATRTRSSNKKDGDRKDEDEDSEEKNEPSKDAPKPPIIKTEVKQECLDSSEDEIWIVQTADMEATQELQKLLCVAKGKEDGQDGDTSKTHKCFNCSQIFASVEGLTNHRCRRRGRKRKSKDLGNLICIPTEEDFLKRAQGRPRQVESSIDSDLLVMRPRKRRSREPTSNPQVVTCHNCNESFTSKVRLKFHMQFHESTNLIRPDGRYTCTECSGTTFSTETELFDHVHFQHDKHKRWQCPVDGCGKTFFLRATLTKHSRTHTDTRRYVCVTCDKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPTLVRVCAVCTRAFRDHQAFANELKEEAEEMTVQLSPTSGLVRHTVQIVESPKLSKPIKRQVSNEVGEPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNSHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADGLTADTDGNRSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWSLAYHRKKVHGKTGPDDPGATSKISKDDYRIPCRDCSEVLPNKTALYKHRKKEHSDNTIRPSSKPGMYSHEESSGGGGACPHCHATFTHATDLHKHVKEAHGSSNASWSNNKPGRPHTCPVCGHGFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEMEGLNPSSEDVMKTLSEQNVPHDKLIEITKMSFAKGTTSVIPSCARALSALSAVPRTHVACIKPAPSNMLDEFQPARRGRGIAKNPRRPKILQRGDSQDPSAYPIVSGEELSDLNVQLLLRDGVLVNGNQMVQLQLDDPMLME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00786223;
90% Identity: iTF_00785432;
80% Identity: -