Hpel005399.1
Basic Information
- Insect
- Heliothis peltigera
- Gene Symbol
- lrrfip2
- Assembly
- GCA_958496145.1
- Location
- OY292326.1:11614415-11622871[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.11 1.2e+03 -1.2 0.6 41 91 52 103 33 107 0.69 2 3 1.5e-77 1.7e-73 247.9 20.1 1 297 123 410 123 413 0.88 3 3 2 2.3e+04 -8.3 12.4 1 44 409 454 409 483 0.44
Sequence Information
- Coding Sequence
- ATGATGGGACAGCGCTCTGAAGTGGCCACGCCTGACAATAGTGACGAAGAGAGCGGAGATGCCTTCACTGACGGTGATTTTGGAGATTCTGATGACGAAACGATCGTCGAACGCCATGAAGACACTAAGCCTGCACAATTGCCAATTAATGAAACTATGAAtaaagatattgaaaaaaatgcaGCTACTAATGGACATTCTAATGGAAGCGTAGATGGATCACCCAGAATGAACGGTCGTAAGAACAGTGAAGCCCATTCGAGTGATGCAGAAAACCAAAGCTTAGTGTTATCAGATTTGCGCAGAGATTCCCATGGCGACCAGAATCCTTCAATAGTTGGCATTCTTGGCGATCAGCAAAACCATGCGGAGCAGAGGTTGGcagcgcggcgggcggcgagAGCAGAAGCGCGTGAGATACGCATGCGCGAGCTGGAGCGCCAGCAGCGCGAACAAGAGGACCATGCCGACAAGGCGTACGATATGTATGCGGGGAAGACACCAGAGACGGTGGGACGCCGACCGCGGCTGGCGGCGCTCAGCCCCGCCGTGCACTCACCGCGACGTAGCTCTGAGGACTCCGCCGATGATGGTTTCAGCATCAAGGACCTTAGGCACGAGTTGAAAGAAGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGATAACGACAAGGCGGCGCTCGGCTACCAGCTCGAGCTGCTCAAGGATCGGATAGAGGAGCTGCACGAGGAATACGCGCAGTTACAGCGCGAACACAAAGAGAAGTGCTCGGCTTTCGAGCGCTTGCGGCGCGAGCACGAGTCGGCCGTGGCGTCACTGCAGCTGGCGCGCGACGCCGTGCTAGCGCGTgacgcggcggcggcggccgcgGGCTTCGCGTTCGCCGACGCGGCCGCGCTGCAGCCCTCCGCCAGCCTCGGCGCCGGCCCGCCCGTCGGCGACGTGCCGGCGCTGGCGCTCGTCACCGCGCAGGCGCAGCAGCTGCTGCACGACGCCGGCGAGGGCACGCTCGACGTGCGGTTGCAGAAGCTGGTGAGCTCTAAGCAAGCGTTGGAATCGGAAGTTCGCAAGCTGAAGCTGCAGCTGAACGAGGAACGCGCCGCAAGACAGAATGGCGTCGCCAACCACCATGACCAGGAGTACGAGAACGAACTGGAGTCAGTGCGCAAGTCTGTGGCGGAGGCGAaggggcgggcggcgcgcgcggaGGCGGAGGCGGCGCTGCAGGCGGCGCACGTCGCGCGCCTCGAGGCGCAGCTGGCCCGTCTGCGAGCGCGGCAGGACCACCACGACCTGCACGAGGACCAGCTCAAGCAGGAGCGCCGCCGTCTGCAGCGGGAGGCTCGGGAAGCTCTCAACCGGGTTGAAGAGTTGGAGACTGAGAACAGCCACCTCACGAAACGCCTGGACAAACTCAAGAACGCCAAGTCCGCGTTGCTGAAAGACCTGTGA
- Protein Sequence
- MMGQRSEVATPDNSDEESGDAFTDGDFGDSDDETIVERHEDTKPAQLPINETMNKDIEKNAATNGHSNGSVDGSPRMNGRKNSEAHSSDAENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRPRLAALSPAVHSPRRSSEDSADDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSAFERLRREHESAVASLQLARDAVLARDAAAAAAGFAFADAAALQPSASLGAGPPVGDVPALALVTAQAQQLLHDAGEGTLDVRLQKLVSSKQALESEVRKLKLQLNEERAARQNGVANHHDQEYENELESVRKSVAEAKGRAARAEAEAALQAAHVARLEAQLARLRARQDHHDLHEDQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_01285560;
- 80% Identity
- -