Hruf040200.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Harpalus rufipes
Gene Symbol
tfip11
Assembly
GCA_951394225.1
Location
OX596284.1:17757467-17762612[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-94 6.7e-90 303.3 10.3 1 275 403 673 403 673 0.99
2 2 0.11 3.7e+03 -0.9 0.1 244 271 687 714 678 724 0.58

Sequence Information

Coding Sequence
atgtctGAGGAAGAAGTGGAAAAGTTCGAAATCACCGACTATGACTTGGACAAcgaatttaatatgtttcgacCGCGTCGAAACTTAACCAAAAACCAGCAAATTTATGgCATCTGGGCTGATGATAGTGACAATGAAGACAGACAACAAAGTTCTTCATCACGAGGGGTTCGGAGATCTAAAGACTATACAGCACCGATTGGGTTCGTTGCTGGTGGGGTTCAACAGGCAGGTAAAAAACAAGACAAAAAGAAAGAAAGCGATGGAGATTCCGATAAATCGGAAGATGAGGATGATAAAGCATATAAAAAAGAGTTTATGAAAAACAGTTCGTCAGATTCAGACAGCGATGGCCCTTCAATGAGGCCTAGTTTTCAAAAATCAACAAAGAGtactgtaacagaaataaatgcAGACATAGCTggtttaagaaataaaaaagcgTTTAACCCTGCTCTTGCAAATAAAGGCGTAGGAAACTGGGAAAAACATACAAAAGGAATCGGAGcaaaacttttattacaaatGGGGTACCAACCGGGTAAAGGTTTAGGCAAAGATCTTCAAGGTATTTCGGCCCCAGTTGAAGCACATATACGCAAAGGCCGAGGCGCAATTGGTGCTTACGGCCCTGAAAAAGCTGCAAGTATAGCTGACAAAAAATCCCAAAAAATCATCGTCGTCGACGATGATATTGACGATGACGAAAATAAATGGAGAAAAGACGGAAAACACATTAAAGACAAAAAGAAAATGCGATATTACTACCGCAGTGTTGATGACGTCATAGAGAAAGGCAAACGGCCTGGCGCATTGCGCAGTACATCAAATTTAAGCGAACTTAGCAAAGTAAAAGTTATAGACATGACCGGCCCTCAACAACGAGTTCTCAGCGGATATCACGCCCTTAGCGGGCCTAAAGCCCCACCTGGGGTTGAAAATTATGAAGATGTTGTCCACAAACAATGCGCAAACTTTGCTCTACCAGAAATCCAACATAATTTAGATTTATTAGTTGATATGTGCGAAGAAGAAATTATTTTGTGCGACAGAAACAGTCGACATTGCCAAGATAAAATAATTGCATTAAATCAAGAAGAACTACAACTCAAAAACGTACTAAAAAAAGAGGATGAATGTATTGAAATCTTAGACAATGTTTTAGaaactgtagaaaaattaatagatccATCCCAAAATTTATCTTTGGGACAAGTTGCGCAAGCATTTCGCGACTTACAGGACAAATATTACGAAGAATATTCTTTGTATGAATTGGGCGAACTTGCGCCGGGATTAGTAGGTCCATTAGTTACTTCCGCTTTGGCGAGTTGGTCCGCGTTAAATTCCCCTAAACaatttacagaaatatttgCGCAATGGAAAGACATTTTAGATAAACCTATACGCGGTATTTTAGAATCGAATAATACTAATATTCAACCGTATGATAGTTTAGTCTGGAATACTTGGATTCCAGTTATTCGGGGCGTTATTTCAACATGGAATGTGCGCGATTGTGACCCtttgataattttaatagaaaCGTGGATGCCTCTACTGCCATCTTggattttagaaaacataataGATCAGTTGGTATTACCGCGTTTAACAAACGAAATAGCAATATGGAATCCATTAACCGATACAACTCCGATTCATATATGGACGCATCCGTGGATACCATTATTAGGGCCCAGAATTCATGCCATAATATTTCCGttaatacaagaaaaattaggCCACGCTTTATCAAACTGGCACCCATCTGATCGTTCTGCAAAACCCATGTTAAAACCGTGGCAACCCGCTCTTCCCGAAGGGGTTTTTGCCGGGTTTCTGCATAAACATATTGTCCCCAAACTTCATCTTTGTATGCAATCTTTCGTTATAAACCCCCATCAACAACATTTAGATGCGTGGAATTGGGTAATGGACTGGAATGATATGATAAATGTGGTGACCATGACGCATATATtagataaatgtttttttccAAGATGGCTGCAAACTTTGGCGTTATGGTTGAACCATAATCCAGATTATGCACAAGTTACTGAATGGTATTCTGGATGGAAGAGGATGCTGTCAGATCAGTTGTTGGTGCAACCCAGCATTAAAGATCACTTCCACAAAGCGCTGGAGATGATGAACCGAGCTGTAAGTACCGGCCAACAACCAGGCGCTATGGAATCAGTTTCTTATCTCACCCATACAGAAAACATGCCTTTACCGCCGCCTCCTCCAAGAATAGACAGTATGGCGGAGGCTCTTCGCACAGCATCAATGATTCCTACAGGTTTCAAAGACTTGATTGCTAAACGCTGTGAAGAAAAAGGGATTTTATTTGTGCCTATACCAAACAGATTTCATGAAGCAAAACAAGTTTATAAAATCGGGACGAATACACAATGTTACATCGATAGGAATGTTGTGTTTATAAATCAAGGATCTACTTGGCTTCCGACATCTTTGACAAGATTGATAGACATGGCgtcttaa
Protein Sequence
MSEEEVEKFEITDYDLDNEFNMFRPRRNLTKNQQIYGIWADDSDNEDRQQSSSSRGVRRSKDYTAPIGFVAGGVQQAGKKQDKKKESDGDSDKSEDEDDKAYKKEFMKNSSSDSDSDGPSMRPSFQKSTKSTVTEINADIAGLRNKKAFNPALANKGVGNWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEAHIRKGRGAIGAYGPEKAASIADKKSQKIIVVDDDIDDDENKWRKDGKHIKDKKKMRYYYRSVDDVIEKGKRPGALRSTSNLSELSKVKVIDMTGPQQRVLSGYHALSGPKAPPGVENYEDVVHKQCANFALPEIQHNLDLLVDMCEEEIILCDRNSRHCQDKIIALNQEELQLKNVLKKEDECIEILDNVLETVEKLIDPSQNLSLGQVAQAFRDLQDKYYEEYSLYELGELAPGLVGPLVTSALASWSALNSPKQFTEIFAQWKDILDKPIRGILESNNTNIQPYDSLVWNTWIPVIRGVISTWNVRDCDPLIILIETWMPLLPSWILENIIDQLVLPRLTNEIAIWNPLTDTTPIHIWTHPWIPLLGPRIHAIIFPLIQEKLGHALSNWHPSDRSAKPMLKPWQPALPEGVFAGFLHKHIVPKLHLCMQSFVINPHQQHLDAWNWVMDWNDMINVVTMTHILDKCFFPRWLQTLALWLNHNPDYAQVTEWYSGWKRMLSDQLLVQPSIKDHFHKALEMMNRAVSTGQQPGAMESVSYLTHTENMPLPPPPPRIDSMAEALRTASMIPTGFKDLIAKRCEEKGILFVPIPNRFHEAKQVYKIGTNTQCYIDRNVVFINQGSTWLPTSLTRLIDMAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00873041;
90% Identity
iTF_01104372; iTF_00766542;
80% Identity
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