Lspi003940.1
Basic Information
- Insect
- Leistus spinibarbis
- Gene Symbol
- tfip11
- Assembly
- GCA_933228875.1
- Location
- CAKOGB010000071.1:555442-559813[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-94 4.5e-90 302.4 11.6 1 275 407 678 407 678 0.98 2 2 0.66 4e+03 -2.5 0.0 243 271 691 719 683 723 0.72
Sequence Information
- Coding Sequence
- ATGTCTGAAGACGAAGTAGAAAAGTTTGAAATCACTGACTATGATTTGGACAATGAGTTTAATATGTTTCGACCTCGTCGAAACCTTTCAAAACAACAACAAATATATGGCATATGGGCAGACGATAGTGACAATGACGACCACCGACAAGGCTCATCAAAGAAAAGTAGTACGCGCAAACCAAAAGATTACTCTGCACCAATCGGATTCGTCGCTGGGGGTGTACAGCAAGCTGGGAAGAAGAAGAAGAAGGAAAAGAAGGGCGACAGTGAGGGTGAATCTGAGAAGTCCGAGGATGATGATGACAAAGTATACAAAAAAGAGTTCATGAAAAATAGTTCAAGCGATTCCGACAGTGATGGACCCCGAGCAGGTTTCGGTAAAAAACCAAATCAGCAATCAACAGTAACAGAAATAACTGGAGATATCGCTGGTTTACGTAAACAAAGGGCAGCCAGAAATCCAGCTTTAGCCAAACAAGGTGTAGGCAACTGGGAAAAACATACGAAGGGCATTGGAGCTAAATTACTACTTCAAATGGGTTACCAACCTGGTAAAGGTTTGGGCAAAGATTTACAAGGTATAAATGCCCCTGTCGAAGCTCATTTACGGAAGGGCAGAGGTGCAATTGGCGCCTATGGACCAGAGAAACCGGCCAGTATTGCTGACCAGAAGATTCTAAAAGAAGGGAAAAAGGAAAAACCAGAGTCGGATGATGAAGAGAAATGGAAAAAGGGGGACAAACATCGTATTGATAAAAAGAAAATGCGGTATTATTATCGTAGTGTTGATGATGTTATTGAAAAAGGAAAACGGCCGGGATCTTTAAGAAATACATCTATTTTAAGCGATCTGAGTAAAGTAAAGGTAATTGACATGACGGGTCCCCAACAACGTGTTCTAAGTGGCTATCATGCGCTGAGTGGCCCAAAGGCGCCTCCAGGAGTAGAACTCTTTGAAGATGTTGTACATAAACAATGTGCCAATTTCGCATTGCCAGAAATTCAACATAATTTAGATTTACTTGTTGACTTATGTGAAGAACATATAATTATGTGCGATAGAAATACACGGCATTGCCAAGATCGCGTCGTAGCACTAAACCAAGAGGAATCGCAATTAAAAAATGTTTTAAAAAAAGAAGAAGAGTATATCAATATTCTTGACAGTGTATTAGACACAGTTAATAAACTTATGGATGAATCACAAGGGCTTTCATTGGGCCAAGTCGCTCAAACATTTAGGGAATTACAGGATAAACATTTTGAGGAATATTCTTTGTACGAATTAGGTGAATTAGCACCAGGTTTAGTTGGGCCATTAATTACATCAGCTTTAGCTAGTTGGTCACCGTTAACAGCACCAAAACAATATATGGATATATTTGTGCAATGGAAAGACATTTTGGATAAACCGAAACATCGGGGCATTTTGGAGTCCAACAATACGAATATACAACCCTATGATAGTCTAGTTTGGAACACATGGGTTCCTGTGATGCGAGGTGTTGTTGGAATATGGAATGCACGTGACTGTAATCCATTAATAGATGTTCTGGAACATTGGATACCGTTGCTGCCCCCGTGGATCATGGATAACCTCATTGACCAATTAATTTTACCACGGCTTAATGCCGAAGTTTCGATTTGGAATCCACTTACTGATACAACTCCTATACATGTTTGGATCCATCCATGGATTCCTCTGCTAGGTGCAAGAATTCACACAACAGTATTTCCACTAATTCAAGAAAAATTGGGTGTTGCTTTATCGAATTGGCATCCATCGGATCGGTCTGCGAAACTTATGCTGAAACCATGGCAGCCGGCCTTACCCGATGGAATATTTGCGGCATTTTTACACAAGCATATCGTTCCGAAATTACACTTATGTATGCAGTCTTTCGTTATAAATCCACACCAGCAACATTTGGATTCCTGGAACTGGGTAATGGACTGGACTGATTTAATAAACGTGGTGACAATGACACACCTATTAGACAAATGTTTCTTCCCACGATGGTTACAAACACTCGCGTTATGGTTGAACCACAATCCAGATTATGCACAGGTTACCGAATGGTATTCTGGATGGAAACGAATGTTAGCTGACCCATTATTAGCACAACCCAGTATAAAAGATCATTTCCATAAAGCTCTTGAAATGATGAACAGAGCTGTAACTACTGGTCAACAACCAGGGGCATTAGAATCCGTATCATACTTAACCAATATGGAAAATTTACCACCGCCCCCACCACCTCCAAGAATAGAAAGTATGGCTGAAGCTTTGCGGTCGGTCACAAATATCCCGACTGGTTTCAAAGATTTAATCGCGAAACGATGTGAAGAACGGGGAATATTATTTGTGCCAATTCCAAATCGGTGCCACGAAGCCAAACAAATATATCGAATTGGAACTAATACACAATGCTATATTGACAGAAATGTCGTATTTGTGAATCAAAATGGTTCTACATGGTTGCCAACATCACTGATTAAATTAATAGAGATGGCTTCATAA
- Protein Sequence
- MSEDEVEKFEITDYDLDNEFNMFRPRRNLSKQQQIYGIWADDSDNDDHRQGSSKKSSTRKPKDYSAPIGFVAGGVQQAGKKKKKEKKGDSEGESEKSEDDDDKVYKKEFMKNSSSDSDSDGPRAGFGKKPNQQSTVTEITGDIAGLRKQRAARNPALAKQGVGNWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGINAPVEAHLRKGRGAIGAYGPEKPASIADQKILKEGKKEKPESDDEEKWKKGDKHRIDKKKMRYYYRSVDDVIEKGKRPGSLRNTSILSDLSKVKVIDMTGPQQRVLSGYHALSGPKAPPGVELFEDVVHKQCANFALPEIQHNLDLLVDLCEEHIIMCDRNTRHCQDRVVALNQEESQLKNVLKKEEEYINILDSVLDTVNKLMDESQGLSLGQVAQTFRELQDKHFEEYSLYELGELAPGLVGPLITSALASWSPLTAPKQYMDIFVQWKDILDKPKHRGILESNNTNIQPYDSLVWNTWVPVMRGVVGIWNARDCNPLIDVLEHWIPLLPPWIMDNLIDQLILPRLNAEVSIWNPLTDTTPIHVWIHPWIPLLGARIHTTVFPLIQEKLGVALSNWHPSDRSAKLMLKPWQPALPDGIFAAFLHKHIVPKLHLCMQSFVINPHQQHLDSWNWVMDWTDLINVVTMTHLLDKCFFPRWLQTLALWLNHNPDYAQVTEWYSGWKRMLADPLLAQPSIKDHFHKALEMMNRAVTTGQQPGALESVSYLTNMENLPPPPPPPRIESMAEALRSVTNIPTGFKDLIAKRCEERGILFVPIPNRCHEAKQIYRIGTNTQCYIDRNVVFVNQNGSTWLPTSLIKLIEMAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00768295; iTF_01040121; iTF_01039229; iTF_01040870; iTF_01229726;
- 90% Identity
- iTF_01040121;
- 80% Identity
- -