Hsub009850.1
Basic Information
- Insect
- Harpagoxenus sublaevis
- Gene Symbol
- tfip11_1
- Assembly
- GCA_030770355.1
- Location
- JASTWR010000052.1:516487-519996[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-102 1.4e-97 328.0 18.0 1 275 385 653 385 653 0.98 2 2 0.013 3e+02 2.2 0.1 245 272 668 695 659 698 0.85
Sequence Information
- Coding Sequence
- ATGTCTGAGGACGAAGTGGAAAGCTTCGAAATCACCGATTATGATTTAGACAATGAATTTAATATAGCCCGTCCACGACGCAAACTCTCAAAGAAACAACAAATGCTAGgAATATGGGCAGACGACAGTGATGAAGATGAGCTATCTGCCAGGCCATCTTTCAAAACCTTTAACAAGGGCCCTAAAAATTATACGGCGCCGGTTAATTTCGTCGCTGGTGGTATCCAACAGGCGGGAAAACCAAAAGAGAAAGAAGACAAGGATGacgaagaagatgaagaagagaTAAAGCACAGTAGCTCGAGTTCAGAAGATGAGAAGTCAAATAGTTCCAAACGTCCGTCCTTCGCCTTGAATTTGAACAGTGACATCGCAGGCCTGCGTAAAAAGCGTAATCAAATAAATCCATTGCTGATGAAAAGCGGAATGGGTAGCTGGGAAGTGCATACAAAAGGCATTGGCGCTAAATTATTGCTGCAGATGGGATTTGAACCTGGTAAAGGTTTAGGTAAACAATTACAAGGAATAAGCGCGCCAGTGGAGGCACATCTCAGAAAAGGAAGAGGCGCGATTGGCGCGTATGGTCCAGAAAAAACACCAAAGATTTCCGAAAAAAAGAAGGATGACGATGGGGAGGAAGCAAAAGAATCCAAGTCTAAGGTATCTCAATGGCGGAAGGGTGATAGTAGCAGCAACAAGAAAAAAGTCAGATACAGTTATAGAAGTGTGGATCAAGTTTTGGAAGATGGAAAACTGAAGCCTAACAGAAAACCTCCAGTGTCTAGCGATATGAGCAGAGTTAAAGTTATCGATATGACTGGGCCAGAACAAAGGATTCTTAGTGGATATCATGCGATAGCTGGCGGTCAGCAGTGTCCTGATGAGACCGTAATTACGCTAGACAAGAAATCGAAAGTGAACTTTGCTCTGCCCGAATTACAGcataatttaaatttacttGTGGACATGTGCGAGCAAGATATTATCCAAAACGATCGGCGAATGAGACATTTAAGTGATAGAATGGTTGCTTTAGAAGCAGAGAAAAAGAATTTATCCAAGGTCGTGGATCAGCACAGTCAATTGATTGACACCTTAGACAATGTGCTTGTAATCGTGGATAGATTGATGAATGAGACGAACGAATTGTCGCTGCAAGAAACCGCGGAGGCTTTCAGGAATTTGCAAGACAATTATTATGAAGAGTACAAGATGTACGAACTTGGTGAATTAGCCAGTAGTTTTGTAGCGCCAAAAATAAAAGATTGCCTGCTCAATTGGAACCCATTGATGCAACCGAAACAGCCGATTAAGTTATTTAACCAGTGGAAAGATATATTGGAGAAAGGAACTAGTACAACTCTTCAGACACAAACTATGCATTCATATGATCAATTAGTATGGAATGCTTGGATGCCGTCTATCAGAGGAGCCATACAGCAGTGGACATGTAGACAGCCTGAGCCTTTAATTGAGTTGATAGAGTACTGGATGCCGTTATTACCTAATTGGATCCTGGAAAATATATTAGATTTATTAGTGTTACCAAAATTGACATTGGAGGTGGAAGAATGGAATCCTCTTACCGATACTGTACCTATCCACACATGGATTCATCCTTGGTTGCCGTTATTacGAAATCGGTTAGATACTTTGATTTATCCAATAATACGTAGAAAACTCGGATCTGCGTTAGGAGGTTGGCATCCGTCAGACAGATCTGCTAGATTAATGCTGCAACCTTGGGCAGAAGTGTTTGCCAAGGGAGACATGGAAGCATTTTTGGTTAAAAACATTATTCCAAAATTGCAAATAACATTATCCGAGTTTGTCATAAATCCACACCAACAGCACTTAGATCAATGGAATTGGGTGTATGAGTGGAAGGAATTAATTCCCGTTCATATCATGGCAGGATTGCTCGATAAATTCTTTTTCCCAAAATGGCTACAAGTCTTGGCACTTTGGCTTAATCATTCGCCTAATTATGATCAAGTTACAACATGGTACATGGGTTGGAAAGGGATGTTGAGCGACAAGTTACTGGTGGAACCAGTGATAAAAGATCATTTCAAGAAAGCATTGGACATGATGAATAGGGCGGTCAGCGGGCCACAAAATCATCAACCTGGCGCACTAGAACAGGTTTCATATTTAACAAGTTTAGAGAGAACTCAGCCGACGATGTCTCAGGTGGCACCGATTGCACAGCCGAGAATGGAGAGACTCGCAGAGGCGGTACGAACGGCTTCGCAAATTCCCCAGGGTTTCAAAGATTTTGTACAAAAGAAATGCGAAGAGAGAGGTATATTATTTATGCCGATCCCGAACAGATATAAGGAGGCTAAGCAAGTGTACAAAGTGGGCAATGTTCAAGCGTACATCGACAGCAATGTCTTGTTCGTATGTCATAATGGTACAAATTGGATGCCAACACATTTAAATGCCTTGCTGGATATGTCTgaactttaa
- Protein Sequence
- MSEDEVESFEITDYDLDNEFNIARPRRKLSKKQQMLGIWADDSDEDELSARPSFKTFNKGPKNYTAPVNFVAGGIQQAGKPKEKEDKDDEEDEEEIKHSSSSSEDEKSNSSKRPSFALNLNSDIAGLRKKRNQINPLLMKSGMGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHLRKGRGAIGAYGPEKTPKISEKKKDDDGEEAKESKSKVSQWRKGDSSSNKKKVRYSYRSVDQVLEDGKLKPNRKPPVSSDMSRVKVIDMTGPEQRILSGYHAIAGGQQCPDETVITLDKKSKVNFALPELQHNLNLLVDMCEQDIIQNDRRMRHLSDRMVALEAEKKNLSKVVDQHSQLIDTLDNVLVIVDRLMNETNELSLQETAEAFRNLQDNYYEEYKMYELGELASSFVAPKIKDCLLNWNPLMQPKQPIKLFNQWKDILEKGTSTTLQTQTMHSYDQLVWNAWMPSIRGAIQQWTCRQPEPLIELIEYWMPLLPNWILENILDLLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWAEVFAKGDMEAFLVKNIIPKLQITLSEFVINPHQQHLDQWNWVYEWKELIPVHIMAGLLDKFFFPKWLQVLALWLNHSPNYDQVTTWYMGWKGMLSDKLLVEPVIKDHFKKALDMMNRAVSGPQNHQPGALEQVSYLTSLERTQPTMSQVAPIAQPRMERLAEAVRTASQIPQGFKDFVQKKCEERGILFMPIPNRYKEAKQVYKVGNVQAYIDSNVLFVCHNGTNWMPTHLNALLDMSEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00898736;
- 90% Identity
- iTF_01421552;
- 80% Identity
- -