Basic Information

Insect: Habrosyne pyritoides
Gene Symbol: -
Assembly: GCA_907165245.1
Location: OU015597.1:3209735-3217520[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 9.4 7e+02 1.5 0.2 1 23 84 107 84 107 0.88

2 19 1.1 81 4.4 0.0 3 23 112 132 110 132 0.95

3 19 0.0075 0.56 11.2 0.3 2 23 136 158 135 158 0.93

4 19 0.32 24 6.1 1.2 3 23 390 411 388 411 0.95

5 19 1.9 1.4e+02 3.6 0.1 1 20 419 438 419 439 0.94

6 19 0.041 3 8.9 0.7 3 23 451 471 450 471 0.96

7 19 0.88 65 4.7 0.9 1 23 487 510 487 510 0.88

8 19 0.035 2.6 9.1 2.4 1 23 519 542 519 543 0.94

9 19 0.038 2.8 9.0 0.4 2 23 620 642 619 642 0.90

10 19 9.5 7e+02 1.4 4.8 1 23 647 669 647 670 0.95

11 19 4.7e-05 0.0034 18.2 1.9 1 23 676 698 676 698 0.96

12 19 6e-06 0.00044 20.9 1.9 1 23 705 727 705 727 0.98

13 19 8.6e-05 0.0063 17.3 2.3 1 23 732 754 732 754 0.96

14 19 0.00099 0.073 14.0 2.2 1 23 760 782 760 782 0.97

15 19 0.00012 0.0087 16.9 2.3 3 23 790 810 788 810 0.92

16 19 0.00064 0.048 14.6 3.0 2 23 817 838 817 838 0.97

17 19 8.2e-05 0.0061 17.4 0.6 2 23 846 868 845 868 0.97

18 19 0.0031 0.23 12.4 0.2 3 23 875 895 874 895 0.99

19 19 5.2e-05 0.0038 18.0 1.9 1 23 901 924 901 924 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	9.4	7e+02	1.5	0.2	1	23	84	107	84	107	0.88
2	19	1.1	81	4.4	0.0	3	23	112	132	110	132	0.95
3	19	0.0075	0.56	11.2	0.3	2	23	136	158	135	158	0.93
4	19	0.32	24	6.1	1.2	3	23	390	411	388	411	0.95
5	19	1.9	1.4e+02	3.6	0.1	1	20	419	438	419	439	0.94
6	19	0.041	3	8.9	0.7	3	23	451	471	450	471	0.96
7	19	0.88	65	4.7	0.9	1	23	487	510	487	510	0.88
8	19	0.035	2.6	9.1	2.4	1	23	519	542	519	543	0.94
9	19	0.038	2.8	9.0	0.4	2	23	620	642	619	642	0.90
10	19	9.5	7e+02	1.4	4.8	1	23	647	669	647	670	0.95
11	19	4.7e-05	0.0034	18.2	1.9	1	23	676	698	676	698	0.96
12	19	6e-06	0.00044	20.9	1.9	1	23	705	727	705	727	0.98
13	19	8.6e-05	0.0063	17.3	2.3	1	23	732	754	732	754	0.96
14	19	0.00099	0.073	14.0	2.2	1	23	760	782	760	782	0.97
15	19	0.00012	0.0087	16.9	2.3	3	23	790	810	788	810	0.92
16	19	0.00064	0.048	14.6	3.0	2	23	817	838	817	838	0.97
17	19	8.2e-05	0.0061	17.4	0.6	2	23	846	868	845	868	0.97
18	19	0.0031	0.23	12.4	0.2	3	23	875	895	874	895	0.99
19	19	5.2e-05	0.0038	18.0	1.9	1	23	901	924	901	924	0.98

Sequence Information

Coding Sequence: ATGTCTTCTGAGGATTCCGACGACGAACCATTATCGGTTATTGCGGCTGCTAAAAAGATTAATCCAGAGGCATTTAAAGAATTACCAACCGAAACTGAAGGCGTTAAAAAAAATATCAAAAGGAAGAAAAAGGTTCCACCGGTTATCCTCAAGTTGCCCAGGAGGGCTAAAAGGGTTTTATCTCCACCGGTCATAGAGCGACCTGCTGATGTATGGCTGTATCTAAAGGATTTAAAACCAACCGGCCCGTATAACTGCTTACTATGCTCTGAATGGTTTATTAATAAATCAAAAATTATCATTCATTATGTTTTGAATCACAAAAAAGATTTTTGTGGGATCTGCAGATATTTTGTCCCTGACAGAGAAGCTTGGTGGGCCCACCTGAAATTCCACACTCCATGGCCTTGCTCCCAATGTGTTGAAAACTTTGAGACCGAATCAGCATTGCGCCACCATCTCAGTTATGTCCACAAATTAGTACATTGTCGCCTCTGCCACTTCCGTATGCCAGATAATGACCAATACAACACTCATCTTTTCCAAAAACACAATGTCACCAATGTTTCAAGTAAAGATGAAGGAATATTATGGGAACAAGATTATGAAGGCAGTACAAAATTTCTTTGCTTACTCTGTTCTAAATCTAATAATTTGTCACGCACATTCTTCAATCATTACATGGGATACCACCACTTTACCCTCAAATGTTTTGCCAGGATCATCTGTGGGAAAGATCCCCCGTTTACTGTTATCGGTGCCGAAGTAAGCTCAGAATTTGTTGAAGGCTTAAAGGAACGTCCACGGTTTGGTTACATTGACTTAGACCAAAAGCAACCAGATGGTGGTCAGGAGTCAGACCAGAGCACACACAATGAAACAAATACATTCATAGATGTTCTCGTACCTGAGGTAAAACAGGAAAGTTTTAGTGAACCAGACGAACCAAAGTGTGATGAAACAATAAAAATTGACGAAAATGATATTACAAAAGATTACAATGGGGATGAAGACTTTGATGTTACTCTCATGGAGCTGATCTTGATGCAATTGTGTTACTTTGATTACATTAGTCAGACTCTGACACATATAAACTCAAATGAAGTGCCTCAAAATTCTGATATAGATTACGATAATATTCATTCTGATTTGAAAACTGATTTGGATTGTTCCTTTTGCCAAGAAAAGTGTGAGACATTACAAGCATTTGCTGTACACATGAGTAAAATGCACTGTGTAAAGTCAGTACCAATATTCTCATGTCGGCTTTGTGCATCTACATTTGATACTCAGCAGGAACTTGACGTTCACACAGTCCAAGAATTAAAAGAGTTTGATGACTTGTGGCTTTGTCAGTTCTGTGACAAGGAGTTTGATAATAGAGAAGCAACAAGACAGCACTTAACGGAACACTGGGATGTTATGGAGTTTGACAATTGCTTCAGTCCCCATTTAGGCTTCAAATGTAAATATTGCCCAACTTTATTCTGGAATGAAACGGACAGACAGACACATCAAGTGAGAGTACACTTTAGTAAACACAAGGAACATTATTATAAATGCGAGAGCTGTGATGAAATTTACAGTGATAAGATTTGGTACATCCATCATTACCTTGAGAAGCATCATGAAGAAAATGACAAAATTCCTCTATATCTTCTGAAATGTTGTATATGTTGCTTGGTGCTGGAGAATGTAGATGAGATGAGGGAACACTTTAAAACCAGCCATCCTGAAGCCCGTAAGGTTTTCTGTTCACTGGATGGTTGCAAGTACAAACCCTTAAGTCATCGGAAATCATTTAAAATGCATTTGAGATTGATCCACAATCCATTATCGCGTTCGGACCGTTCGGTATCGTGCACTGTTTGCGGGCGCGAATTCACCAGTCTACGAGCGTGTAGCGCACACATGGCCCAAGTGCATGTACCGGGGAAATTCAAGTGCAAGTTGTGTCGGGAGACGCTGCATACTATGGACGAAAGAAAACTCCACTATCTAATCCATCACCCGGGCCGCCACCCGTTCGAGTGTACAGAGTGTGGCAAATCCTTCCAATACAAGTCTTCCTTGTACATGCATAAACAGGACCATGTGCCCAATAAGCAGAGCTACACTTGTAGTTTTTGCGGGAAAGTGTTTCAGAAGAAAGACTCGTTCCGCGAGCACATGCAGATCCACGAAGGGCCTCGACACGCGTGCTCTTACTGCCCGATGCGGTTCGTGCAGCGCTCGAACATGCTGCGGCACGAGCGCCGCCACACGGGCGAGCGCCCGTACGCGTGTCCACACTGCCCGCGTACCTTTGCCGACAAGGGAGCGTGCACGTCACATTCTAGGACCCATTCAAAGGACACGTCGCACGCTTGCATATACTGCGGTCAGACATTCGTACAGAAGTCAAAGCTGACTTACCACATTCGTAAACATACCGGAGAGAATTTGGAAACATGTTTAATATGTTCAAAGTTGTTTACAAGCGCTTGTTCTTTACGTGAACACATGAAGACTCACAACGATAAGAAGCCAATTGTCAAATGTCCAATGTGTGAGAAGATGTATAGCGACGAAAGGTATATGCTGCGTCACCTTCGTACATCCCATACGCGACGGCACCACGGGTGCCCGCTGTGCCGCAAGCCGCTGTCCAGCCCTGCCGGCCTGCGCCACCACGTACTCACGCACAGCTCTAGGCACACCTTCCGGTGTAAATTGTGTCCAAAAACTTATGCTGACAAGAGGACCATCGTGAAGCACATGCGGCGACGTCACACCCTTAAAGGCACAGAAATTAATATAAAGGACTTCTACACACGATTAGATCCTCGAGATTGTGAACTTGGGCTGAGTGAAGAGATCATGACAACCATATTTGGACCACCTAAGAAAACTGCTAATGATGTATTGGTAGGCGACTTCGTTACGCTCAGAAAGGATCTCAAACTCCCTGAAAAGAAAGTAGTTGAACCGAAACAGACAAAAGAATCGACTGTAGAGGCTTCTAAAGAGAGTGACGAGGAAGGTCCGAATAATGTGACGACGATTTGTATTAAACTGGAACGCAAAGATGATGAACAAAATGGTGAGGAAGAATTAGAACCTACAGATTTTGTAAGCGTTAAAATTGAGCCAGCAGATGATGATGAAATGTCTTGA
Protein Sequence: MSSEDSDDEPLSVIAAAKKINPEAFKELPTETEGVKKNIKRKKKVPPVILKLPRRAKRVLSPPVIERPADVWLYLKDLKPTGPYNCLLCSEWFINKSKIIIHYVLNHKKDFCGICRYFVPDREAWWAHLKFHTPWPCSQCVENFETESALRHHLSYVHKLVHCRLCHFRMPDNDQYNTHLFQKHNVTNVSSKDEGILWEQDYEGSTKFLCLLCSKSNNLSRTFFNHYMGYHHFTLKCFARIICGKDPPFTVIGAEVSSEFVEGLKERPRFGYIDLDQKQPDGGQESDQSTHNETNTFIDVLVPEVKQESFSEPDEPKCDETIKIDENDITKDYNGDEDFDVTLMELILMQLCYFDYISQTLTHINSNEVPQNSDIDYDNIHSDLKTDLDCSFCQEKCETLQAFAVHMSKMHCVKSVPIFSCRLCASTFDTQQELDVHTVQELKEFDDLWLCQFCDKEFDNREATRQHLTEHWDVMEFDNCFSPHLGFKCKYCPTLFWNETDRQTHQVRVHFSKHKEHYYKCESCDEIYSDKIWYIHHYLEKHHEENDKIPLYLLKCCICCLVLENVDEMREHFKTSHPEARKVFCSLDGCKYKPLSHRKSFKMHLRLIHNPLSRSDRSVSCTVCGREFTSLRACSAHMAQVHVPGKFKCKLCRETLHTMDERKLHYLIHHPGRHPFECTECGKSFQYKSSLYMHKQDHVPNKQSYTCSFCGKVFQKKDSFREHMQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCPRTFADKGACTSHSRTHSKDTSHACIYCGQTFVQKSKLTYHIRKHTGENLETCLICSKLFTSACSLREHMKTHNDKKPIVKCPMCEKMYSDERYMLRHLRTSHTRRHHGCPLCRKPLSSPAGLRHHVLTHSSRHTFRCKLCPKTYADKRTIVKHMRRRHTLKGTEINIKDFYTRLDPRDCELGLSEEIMTTIFGPPKKTANDVLVGDFVTLRKDLKLPEKKVVEPKQTKESTVEASKESDEEGPNNVTTICIKLERKDDEQNGEEELEPTDFVSVKIEPADDDEMS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00007345; iTF_01416124; iTF_01437374; iTF_01252063; iTF_01083615; iTF_01417084;
90% Identity: -
80% Identity: -