Basic Information

Insect: Tetheella fluctuosa
Gene Symbol: -
Assembly: GCA_951216915.1
Location: OX578227.1:9915988-9924990[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 5.2 4e+02 2.5 0.1 1 23 83 106 83 106 0.88

2 20 0.21 16 6.9 0.1 3 23 111 131 109 131 0.96

3 20 0.15 12 7.3 0.1 2 20 135 153 134 154 0.94

4 20 5.9 4.6e+02 2.3 3.5 3 23 162 183 160 183 0.91

5 20 0.4 31 6.0 2.7 2 23 388 410 387 410 0.94

6 20 0.0038 0.3 12.3 0.1 1 21 418 438 418 439 0.95

7 20 0.009 0.7 11.2 0.9 3 23 450 470 449 470 0.97

8 20 4.8 3.7e+02 2.6 1.0 1 23 486 509 486 509 0.88

9 20 0.79 61 5.1 5.3 1 23 518 541 518 542 0.94

10 20 0.033 2.6 9.4 0.5 2 23 619 641 618 641 0.91

11 20 2.5 1.9e+02 3.5 2.6 1 23 646 669 646 669 0.95

12 20 5.4e-05 0.0042 18.2 1.9 1 23 675 697 675 697 0.96

13 20 3.7e-05 0.0028 18.7 2.2 1 23 704 726 704 726 0.98

14 20 0.0001 0.0077 17.3 2.3 1 23 731 753 731 753 0.96

15 20 0.0045 0.35 12.1 3.2 1 23 759 781 759 781 0.99

16 20 2e-06 0.00016 22.6 1.4 1 23 787 809 787 809 0.98

17 20 0.00026 0.02 16.0 3.3 2 23 816 837 816 837 0.98

18 20 3.2e-05 0.0025 18.9 0.8 2 23 845 867 844 867 0.97

19 20 0.001 0.079 14.1 0.8 1 23 872 894 872 894 0.96

20 20 0.0001 0.0078 17.3 1.5 1 23 900 923 900 923 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	5.2	4e+02	2.5	0.1	1	23	83	106	83	106	0.88
2	20	0.21	16	6.9	0.1	3	23	111	131	109	131	0.96
3	20	0.15	12	7.3	0.1	2	20	135	153	134	154	0.94
4	20	5.9	4.6e+02	2.3	3.5	3	23	162	183	160	183	0.91
5	20	0.4	31	6.0	2.7	2	23	388	410	387	410	0.94
6	20	0.0038	0.3	12.3	0.1	1	21	418	438	418	439	0.95
7	20	0.009	0.7	11.2	0.9	3	23	450	470	449	470	0.97
8	20	4.8	3.7e+02	2.6	1.0	1	23	486	509	486	509	0.88
9	20	0.79	61	5.1	5.3	1	23	518	541	518	542	0.94
10	20	0.033	2.6	9.4	0.5	2	23	619	641	618	641	0.91
11	20	2.5	1.9e+02	3.5	2.6	1	23	646	669	646	669	0.95
12	20	5.4e-05	0.0042	18.2	1.9	1	23	675	697	675	697	0.96
13	20	3.7e-05	0.0028	18.7	2.2	1	23	704	726	704	726	0.98
14	20	0.0001	0.0077	17.3	2.3	1	23	731	753	731	753	0.96
15	20	0.0045	0.35	12.1	3.2	1	23	759	781	759	781	0.99
16	20	2e-06	0.00016	22.6	1.4	1	23	787	809	787	809	0.98
17	20	0.00026	0.02	16.0	3.3	2	23	816	837	816	837	0.98
18	20	3.2e-05	0.0025	18.9	0.8	2	23	845	867	844	867	0.97
19	20	0.001	0.079	14.1	0.8	1	23	872	894	872	894	0.96
20	20	0.0001	0.0078	17.3	1.5	1	23	900	923	900	923	0.97

Sequence Information

Coding Sequence: ATGTCTTCTGATGACTCTGATGATGAACCACTATCCGTTATAGCGGCTACTAAAAAGAAACATTTAGGGGAAATTATAGAAAATGCGACCGAAAACGAAgtcaaaataattaagaaacgAAAGAAAAAAGTTCCTCCGGCTATAATAAAGTTGCCGAGGAGAGTTAAAAGGGTTCTATCTCCACCAATTATCGAGAGACCAGCCGATGTATGGCTATATCTAAAAGATTTGAAGCCAACCGGCCCATATAACTGCTTACTATGCCCTGAATGGTTCATcaataaatctaaaattatcATTCACTATGTTTTGAACCACAAGAAAGATTTTTGTGGGATTTGCAGatatttCGTACCTGACAGAGATGCCTGGTGGGCTCACATGAAATTCCACACTCCTTGGCCATGCTCACAATGTGTAGAAAACTTTGATACGGAGACAGCCTTGCGTCATCATCTCAGTTGTGTCCACAAATTAGTACACTGCCGTCTCTGTCACTTCCGTGTACCTGACAATGACCAGTATAACACACATCTTTTCCAAAAACACAATGTTACAAATGTGTCAAGCAAAGATGAAGGAATATTATGGGAACAAGATTATGAAGGTAGTACTAAATTCCTCTGTTTACTCTGttctaaatcaaataatttgtCTCGGACATTCTTCAATCACTATATGGGATACCACCATTTCACACTCAAATGTTTCACCAGAATTATATGCGGTATAGATCCACCATTTACAGTTATTGGAGCTGATGTGAGCACAGAGTTTGTTGATGGCTTAAAGGAACGTCCAAGGTTTGGGTATTTGGACTTAGATCAAAAGCAGCCTGATGGTGATCAAGACTCAGATCATAGCACAAACAATGAAACAAATACATTTCTTGATGTTCTTGTACCTGAGGTAAAGCAGGAAAGTCTAAGTGATCCAGAAGAACCAAAACATGATGAAACAATTAAAGTTGATGAAAATGATGTTACGAAAACGTATACAGGTGATGAAGATTTTGACGTAACACTAATGGAACTAATCCTGATGCAGTTGtgttattttgattacataaGTCAGACACTGACACATATAAACTCAAATAAAGTTCCTCAAAACTCTAATATTGATTATGAAAATGTTAATTCCAATTTGAAAGTTGATTTGTGTTGTGCTTTATGTAAAACAAAGTATGAAACGTTACAAACATTTTCTGTGCACATGAATAAAATGCACTGTGTGAAATTGGTGCCTATATTCTCATGTAGGGTTTGCGCAACTTCATTTGACAGTCAGAATGAACTTGAAACACACATGCTTCAAGAGTTGAAAGAATTTGACGATTTGTGGCTTTGTCAGTTTTGTGACAAGGAGTTTGATAATAGAGAAGCAACAAGAAAGCACTTAAATGAACACATTGATGAAATGGAGTTCGACAATTGCTTCAGTCCACATTTAGGTTTCAAATGTAAATTTTGCCCAACTTTATTCTGGAATGAAACGGATAGACAGACTCATCAAGTGAGGGTGCACTTTAGTAAGCACAAGGaacagtattataaatgtgagagctgtaatgaaatttattgtgataagATTTGGTACATACACCATTACCTTGAAAAGCATCATGAAGAAAATGACAAGATTCCTCTATATCTTCTGAAATGTTGTCTATGCTGCTTGGTGATGGAAAGTGTAGACGAGATGAGGGATCACTTCAAAAGCAATCACCCTGAAGCCCGCAAGGTTTTCTGTTCACTGGATGATTGCAAGTACAAACCGCTGAGCCATCGGAAATCTTTTAAGATGCATTTGAGATTGATCCACAATCCATCAACACGATCGGAACGTCCTGTAACGTGCACAGTTTGCGGGCGCGAATTCACCAGTTTGCGAGCGTGCAGCGCACATATGGCCCAAGTACATGTACCTGGCAAGTTTAAGTGCAAGCTGTGTAGGGAGACATTGCATACTTTAGATGAGAGAAAACTCCACTATCTAATCCAACACCCGGGCCGCCATCCGTTCGAGTGCACCGAGTGCGGCAAGTCCTTCCAATACAAGTCATCATTGTACATGCACAAACAAGACCACGCGCCAAATAAACAAAGCTACACCTGCAGTTTTTGTGCAAAAGTTTTTAAGAAGAAGGACTCGTTCCGCGAGCACATGCAGATCCACGAGGGGCCGCGGCACGCGTGCTCGTACTGCCCGATGCGCTTCGTGCAGCGCTCCAACATGCTGCGCCACGAGCGGCGCCACACGGGCGAGCGGCCCTACCAGTGCCCCCACTGCGCGCGCACCTTCGCCGACAAGGGGGCCTGCACCTCGCATTCTAGgaCACATTCGAAGGAAACATCTTACGCTTGTTTATACTGCGGCCAGACATTCGTACAGAAATCGAAGTTGACTTATCACATTCGAAAACATACTGGAGAGAATTTAGAAACATGCTCAATATGTTCAAAGTTGTTCACCAGCGCTTGTTCTCTACGGGAACACATGAAGACTCACAATGATAAGAAGCAAATTGTCAAATGTCCCATGTGCGATAAGAAGTACAGCGACGAGCGCTATATGCTGCGGCACCTGCGCACGTCGCACACGGGGCGGCACCACGCGTGCCCGCTGTGCCGCAAGTCGCTCACGAGCGCGGCCGGCCTGCGCCACCACGTCATCACGCACTCCGTCAGGGACACCTTCAGTTGCAAAATATGTCCTAAAACTTATGCTGACAAGAGGACAATTTTGAAGCACTTGCGGCGACGTCACAATCTCAACGGCGCAGAGATTAATATAAAGGACTTCTACACTCGATTAGATCCTCGAGAATGTGAACTTGGGCTCAGTGAAGAAAtcatgacaaaaatatttggTGCACCAAAGAAAACTGCCAATGATGTATTGGTAGGCGACTTTGTTACGTTCACAAAAGAGATTGAACtccctgaaaataaaaaagaagaaacgAAAGAGACGAAAGAAACAGCTGAAGAGGTTTCCGAAGAGAGTGAAGAGGATGTCGAGCATCAGGTAGTGACGATATCCATAAAGCAGGAACGCAAAGATGACAATAGTGAAGAGTTAGAGCCTACAGATTTTGTCAGCGTTAAAATTGAGCCTAcggatgaagatgatgaaatgGCTTGA
Protein Sequence: MSSDDSDDEPLSVIAATKKKHLGEIIENATENEVKIIKKRKKKVPPAIIKLPRRVKRVLSPPIIERPADVWLYLKDLKPTGPYNCLLCPEWFINKSKIIIHYVLNHKKDFCGICRYFVPDRDAWWAHMKFHTPWPCSQCVENFDTETALRHHLSCVHKLVHCRLCHFRVPDNDQYNTHLFQKHNVTNVSSKDEGILWEQDYEGSTKFLCLLCSKSNNLSRTFFNHYMGYHHFTLKCFTRIICGIDPPFTVIGADVSTEFVDGLKERPRFGYLDLDQKQPDGDQDSDHSTNNETNTFLDVLVPEVKQESLSDPEEPKHDETIKVDENDVTKTYTGDEDFDVTLMELILMQLCYFDYISQTLTHINSNKVPQNSNIDYENVNSNLKVDLCCALCKTKYETLQTFSVHMNKMHCVKLVPIFSCRVCATSFDSQNELETHMLQELKEFDDLWLCQFCDKEFDNREATRKHLNEHIDEMEFDNCFSPHLGFKCKFCPTLFWNETDRQTHQVRVHFSKHKEQYYKCESCNEIYCDKIWYIHHYLEKHHEENDKIPLYLLKCCLCCLVMESVDEMRDHFKSNHPEARKVFCSLDDCKYKPLSHRKSFKMHLRLIHNPSTRSERPVTCTVCGREFTSLRACSAHMAQVHVPGKFKCKLCRETLHTLDERKLHYLIQHPGRHPFECTECGKSFQYKSSLYMHKQDHAPNKQSYTCSFCAKVFKKKDSFREHMQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYQCPHCARTFADKGACTSHSRTHSKETSYACLYCGQTFVQKSKLTYHIRKHTGENLETCSICSKLFTSACSLREHMKTHNDKKQIVKCPMCDKKYSDERYMLRHLRTSHTGRHHACPLCRKSLTSAAGLRHHVITHSVRDTFSCKICPKTYADKRTILKHLRRRHNLNGAEINIKDFYTRLDPRECELGLSEEIMTKIFGAPKKTANDVLVGDFVTFTKEIELPENKKEETKETKETAEEVSEESEEDVEHQVVTISIKQERKDDNSEELEPTDFVSVKIEPTDEDDEMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00761987;
90% Identity: -
80% Identity: -