Gqui025618.1
Basic Information
- Insect
- Gonioctena quinquepunctata
- Gene Symbol
- retn
- Assembly
- GCA_018342105.1
- Location
- JAFIRS010000053.1:886015-1250863[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-26 5.6e-23 82.2 0.0 2 89 72 157 71 157 0.96
Sequence Information
- Coding Sequence
- ATGCCGAACCAGGACGGCTTCCAGCTGCCCGTCCCCTTCCCGTTCCCGCACCCGGCGGCGGCTTTCTTGCCGCCGATGGCGCCGCAGCCGGCAGCGCCATCTTCCGGCAGCTCGCACTCTTCGGAAGGTAGCGCCTCGTCACAGCACACCTGGTCCTTCGAGGAGCAGTTCAAACAGGTGCGTCAGttatatgaAATAAATGACGACCCCAAAAGGAAGGAATTCCTGGATGATCTCTTCTCCTTCATGCAAAAACGAGGAACTCCAATTAACAGACTTCCAATTATGGCAAAATCCGTTCTCGATCTCTACGAATTATACAACCTGGTGATAGCTAGAGGAGGATTAGTCGACGTAATAAACAAAAAACTGTGGCAAGAAATCATCAAAGGACTGCATCTGCCATCATCGATTACCTCGGCAGCATTTACTCTCAGAACACAATACATGAAATACCTATACCCGTATGAATGCGAGAAAAGGCGTCTGAGCACGCCGTCGGAATTGCAGGCCGCGATAGACGGCAACAGACGTGAAGGACGTCGTAGTAGTTACGGTCAGTATGACAGCATGCAGCGATCTCCTAATCCCACCCTGCAGATGTCGCCGCTGTCGTTGGTTTCGCAGCAACAGCAGCAGCAACTGGCCGCGCGAATGATGGGTGGCGGCATCAACCTACACAATGGCGCGCATCATCCTAGTCACCCACAGCCTATGGGACAGCCTATGAACGGAGGGCCTCTACCAGGCCTAGCACCCAGCGAATTCGAGGCCCGCATGATGGAATACGTCAAACTCCTCAACAAAGAAATCAGAAGTTCGACGGCCACGCCACCCAGACAAGGCGACATTACGCCCCCTAACAACACGTCCTCCCTCAACCAACTCGAAATGTCGCGCATGACGCTCTGGAATCTATACAACAACAATCAGCCACCCATAGAACCCCAGAAAGAGCCCATCAATCTCTCCGAGCCTTCTCAGCCTACCGTCAAGAGGGAGCAGGAGAGCAGAGAATCGCCCCCGCCCCCTAAAAGGTTACCGAAGGACGAGGAGATTGAGATGCCACCTGCGCATAAGAGTTCGTCATCTTCGACGCATATAAAGATAAATTCCAGAGgtgattcTCGCAACGGAGACAATTCCCTAGTCGTCAGTATGGAACTCAATGGCGTAACATATCAGGGGGTGCTTTTCGCGCAGAATTCGCCCTCGCCCTCCGGGACGCGAACGGCACTGGCTTCTTAA
- Protein Sequence
- MPNQDGFQLPVPFPFPHPAAAFLPPMAPQPAAPSSGSSHSSEGSASSQHTWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPSELQAAIDGNRREGRRSSYGQYDSMQRSPNPTLQMSPLSLVSQQQQQQLAARMMGGGINLHNGAHHPSHPQPMGQPMNGGPLPGLAPSEFEARMMEYVKLLNKEIRSSTATPPRQGDITPPNNTSSLNQLEMSRMTLWNLYNNNQPPIEPQKEPINLSEPSQPTVKREQESRESPPPPKRLPKDEEIEMPPAHKSSSSSTHIKINSRGDSRNGDNSLVVSMELNGVTYQGVLFAQNSPSPSGTRTALAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00056332; iTF_00386971; iTF_01479906; iTF_00814181; iTF_00277925; iTF_01121360; iTF_00049042; iTF_00639316; iTF_01058903; iTF_01058153;
- 90% Identity
- -
- 80% Identity
- -