Gfus017604.1
Basic Information
- Insect
- Glossina fuscipes
- Gene Symbol
- -
- Assembly
- None
- Location
- Scaffold216:165710-176713[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2e-11 4.8e-08 32.7 0.0 1 38 293 331 293 336 0.89 2 4 5.9e-14 1.5e-10 40.8 0.1 2 39 348 385 347 388 0.94 3 4 4.9e-17 1.2e-13 50.7 0.0 1 45 402 447 402 447 0.97 4 4 4e-19 1e-15 57.3 0.0 1 42 454 496 454 498 0.96
Sequence Information
- Coding Sequence
- GGTCTCCTGCGTACCGCCGAACAATTAAAAATCAAAGGTCTTTGCGAGACGGCTGAGAATGCGGATGATTTAAACGACGCTGCCACTGCTACTATCACTGTCTCCGAGAATATACAACAAGCCGTGCAACAACAGCAATTAAGTCGTAAATCTCGTGTACGTAAACGTTCAAAATCGCCAGATTTGCAACAGTTACAGCAACAGCATCATCAGCAATCTCAACATCCGCAAGCAATTCTTATACAAAATCAGAATCAAGCTGCCATCGTTAGTTTGCAACAGACTTCGGCTGGAAATTATATACCGGTATCGGGTGTTCAAACGGTTCAAACCACTTCGGGTGGCGGACCACCGCAACCTGGTACTACAATAGTAACGGCAGACGATTCGGACTCTGATAAACCGACTCTGCAGAAAATCTGTAAAACCGAAGAggcttcggcttcaccggcttcgacgtcatcggcttcggcCTCGAATAATGCAGCTGGCGTAACTGCAGTGGCCAGCTCAGGACCGGCGATTGTCACACAAATTGTAGTAGCACGCGACGGCAAAGATAAAAATATGACTAGTTTAGGCATGGGCATGAATGGCGGCATTTTAGGAGTACCGATGGGCTTTTTGGACTTCGCTCCTGAACCCCCAGCACCTTCAGCAACCCCTGTCACTGTTACTGAACACGTAGATCTATCTTGTAACCCTAGTACAGACACAAGAGATCTATCGAACATGTACAATTCCGACACGAGCGATGATTCAATGATGATTGCTAATGGTTCACCCCACGATCAAAATGAACCCCATTACACGAATTTAGATCAACAACAGCATGGTGGCGAACTCAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCTCTAAAGAATCAAAATATGAGTCTGACGAAGGCCTCCGTTACATATGGCATCCCCTCAACTACACTGTGGCAGCGTGCTCATCGTATGGGCATTGAAACGCCTAAAAAGGAGGGTGGTACAAAATCTTGGAATGAAGATTCATTGAATAATGCCTTGGACGCGTTGCGTTCCGGACAAATATCGGCTAATAAAGCGTCTAAGGCCTACGGTATACCTTCCTCGACTTTATATAAAATCGCTCGACGTGAAGGCATACGCTTAGCGGCACCATTCAATGCAGCACCCACCACTTGGACTCAAGATGATTTGGATCGCGCTCTGGCGGCTATACGAGCCGGTCACACATCGGTACAGAAGGCAAGTGCTGAGTTTGGTATACCAACAGGCACTTTATACGGCCGCTGTAAACGTGAAGGTATAGAGCTCTCAAGGTCAAATCCTACACCTTGGTCCGAGGATGCTATGAATGAAGCCTTAAATTCAGTACGCGTGGGTCAAATGTCCATTAATCAAGCCGCTATAAATTATAATTTACCCTATAGTTCTCTGTATGGCCGATTTAAGCGAGGTAAATACGATCAACAGTTCCAGTATAGTCCATCGCCGCACCAATCGGGTCACGGTAGTAGTACGCCGCAGCAGCAAACAGGCCAAACACCACAGCATATTCAACAGCATGTGGTGCATATACAGCAGCAACATCACCCATCTCAACAGCAACACGGCCAGCATATTCAACAGGATGTTGTGGTTACATCAAGCAGTCAGCAACAGCAAGTACATCAACATGGCGGCAGCTCAACAGCGGCCGGACAACAGCAGCAACAGCAAATCCAACAGATCTATCATCATCATAGCACACCCGAAAGGAGTTGA
- Protein Sequence
- GLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVQQQQLSRKSRVRKRSKSPDLQQLQQQHHQQSQHPQAILIQNQNQAAIVSLQQTSAGNYIPVSGVQTVQTTSGGGPPQPGTTIVTADDSDSDKPTLQKICKTEEASASPASTSSASASNNAAGVTAVASSGPAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNMYNSDTSDDSMMIANGSPHDQNEPHYTNLDQQQHGGELKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALDALRSGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTQDDLDRALAAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAINYNLPYSSLYGRFKRGKYDQQFQYSPSPHQSGHGSSTPQQQTGQTPQHIQQHVVHIQQQHHPSQQQHGQHIQQDVVVTSSSQQQQVHQHGGSSTAAGQQQQQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00750379; iTF_00746629; iTF_00747386;
- 90% Identity
- iTF_00750379;
- 80% Identity
- -