Basic Information

Insect: Glossina austeni
Gene Symbol: L
Assembly: GCA_000688735.1
Location: Scaffold92:280661-284738[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.37 28 5.5 5.7 1 23 66 88 66 88 0.98

2 18 2e-07 1.5e-05 25.3 3.1 1 23 94 116 94 116 0.99

3 18 9.3e-06 0.00071 20.0 0.3 1 23 122 144 122 144 0.98

4 18 0.55 42 5.0 1.0 2 23 209 232 208 232 0.90

5 18 0.0064 0.49 11.1 0.3 3 23 260 281 258 281 0.96

6 18 0.031 2.4 8.9 0.5 1 23 379 401 379 401 0.96

7 18 0.0023 0.18 12.5 0.8 2 23 409 430 408 430 0.96

8 18 2.1e-05 0.0016 18.9 0.9 1 23 438 462 438 462 0.93

9 18 0.12 9.3 7.1 0.0 1 19 467 485 467 487 0.96

10 18 8.1 6.1e+02 1.3 0.4 1 23 497 520 497 520 0.91

11 18 0.0012 0.092 13.4 2.9 1 23 559 581 559 582 0.96

12 18 2.6 2e+02 2.9 0.9 1 23 737 761 737 761 0.89

13 18 0.00088 0.067 13.8 4.6 2 23 770 792 769 792 0.96

14 18 0.1 7.8 7.3 0.1 1 23 798 820 798 820 0.92

15 18 0.25 19 6.1 0.3 2 20 828 846 827 849 0.93

16 18 3.5 2.6e+02 2.5 0.6 2 23 940 961 940 961 0.93

17 18 0.00042 0.031 14.8 0.1 1 23 971 993 971 993 0.97

18 18 0.0087 0.66 10.7 0.7 1 23 1000 1022 1000 1022 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.37	28	5.5	5.7	1	23	66	88	66	88	0.98
2	18	2e-07	1.5e-05	25.3	3.1	1	23	94	116	94	116	0.99
3	18	9.3e-06	0.00071	20.0	0.3	1	23	122	144	122	144	0.98
4	18	0.55	42	5.0	1.0	2	23	209	232	208	232	0.90
5	18	0.0064	0.49	11.1	0.3	3	23	260	281	258	281	0.96
6	18	0.031	2.4	8.9	0.5	1	23	379	401	379	401	0.96
7	18	0.0023	0.18	12.5	0.8	2	23	409	430	408	430	0.96
8	18	2.1e-05	0.0016	18.9	0.9	1	23	438	462	438	462	0.93
9	18	0.12	9.3	7.1	0.0	1	19	467	485	467	487	0.96
10	18	8.1	6.1e+02	1.3	0.4	1	23	497	520	497	520	0.91
11	18	0.0012	0.092	13.4	2.9	1	23	559	581	559	582	0.96
12	18	2.6	2e+02	2.9	0.9	1	23	737	761	737	761	0.89
13	18	0.00088	0.067	13.8	4.6	2	23	770	792	769	792	0.96
14	18	0.1	7.8	7.3	0.1	1	23	798	820	798	820	0.92
15	18	0.25	19	6.1	0.3	2	20	828	846	827	849	0.93
16	18	3.5	2.6e+02	2.5	0.6	2	23	940	961	940	961	0.93
17	18	0.00042	0.031	14.8	0.1	1	23	971	993	971	993	0.97
18	18	0.0087	0.66	10.7	0.7	1	23	1000	1022	1000	1022	0.95

Sequence Information

Coding Sequence: ATGGCGCTGCTTGAGCGCAGCGATGAAGCAACAGTTGGAGAGAAACAGAAAATTTCGTCTCCAATGCTTCGTAATGATTGCCATCTAAATAAAGTCTTCTTTTCCTTTTACAAATTAAGCCTACGAAGCAGGCAGAGAGCTTTAAACGGTTATATAATGTCTTTATCATTGCAGAGCCATGCCGAACACTTGCCTTTTAAATGCGAATATTGTGCTCGCCTATTTAAGCATAAACGCTCACGGGATCGTCATACAAAATTGCATACCGGAGATCGTCGTTATCGCTGTCCTCACTGTGAGGCAGCATTTTCCAGAAGCGATCATTTGAAAATTCATATGAAAACCCATGACAATCAGAAACCATTCCAGTGTACGATTTGTAATAGAGGTTATAATACAGCGGCCGCTCTCACTTCTCATATGCAAAATCATAAGAAACAAGCCGCTCTCTTAGCCGCCGGTGGTAATCCTCAAACTCTTAGCTATAGTCCTCGATCTACTGGGTCTGCTTCCAGTAATGGTAGTTTGCATAAACGCCGTTACAATCTCGCAATTGAACCGGAGAATAGTCCAAGTCGTTTGGATTTTCCCAAACGTGTGCGCTGTTCGTCGTCTAACTTTCTCAAGTGTACATTTTGTACTAAATCCGATTTTGTTAATATGGAACAACTGAACTCTCACATCCAGCGTATGCATGAGAAAGAGTTAATCAATACGATGCCTCAAGCTTCGACCACCACTCCACTGCCTGCCGATGGTAGCGGTTTCCAATTGGCCTGCGAGTATTGCACTATGAAATTCCCGAATATACCGACAATGTTCCAGCACATGCGTTCCACTCATATCGATCGTCTTGCAAGCCCGAATTCCTATTTCGAACATTTGAACCGTTTGGCAGCGTCGGGTACATTCAGTCCACGTTTGCTTACTAACCCACCATTAAGAAGTTCTGCTAGCACCGAGGAGAATTCCATTAAGGAAGAAACTCAAACCAACAGTCCTAAGACCGTAGAGAATTCGGCCAAAACCAATGAAGATGAACCCACAGATCTAAGCCAAAATAATAGGCATCAGCACTCTCCGCCTGCTGCGCTGCAGGATCCTCCTTCAACAGCCAGCGAAAAGCCGGGCGTCTACCTTTGCAATCAATGCAATGCCGGTCTACCAAATTTCGATAGTTTTCGTACTCATTTGCAGACTCATTTGGCCCAAAGTCTTAATTTAGTTTGTCATCATTGTGGCTTAGTACTGCGAGAGCTATCCGACTACGAACGACATGTTATATCGCATTTCCTTATCACAAACTCTGAATACAATTGTCCGAGCAATTGCCAGAAGACTTTTACTAAATCGGATGATTTGCAAAAACATTTAATCGATCAGCATACAGTTACAGTCTACAAGTGCGGAATATGCTCGGATATATTTGACACTAAAGTTGCTTTGCAGGTTCATTTCGCCTGCACGCATGCGGAAGAAATTAAAATTTTCCGTTGCTCCGCTTGCATGGATGTCTTTCGCAATGAAAACGATTTCGGTGTCCACGTGAAAACACGTCATCAAGCTGTCAACCCGAATCCGACCCCTATTAACAATTTGCAATGCATGTTTTGTACGGCAGTGTGCTCATCGGATCTCGAAATGCAATTCCATTTGGCCGCGCATGCCCGACAATTCCGTTGCCCCTCGTGTCCGGAAACATTTCATGTTGAATTTCTTTTGGATAGACATATGCAGACGCATCATGGTGAACGTGTAGCCGTCGCTCAAAAGGACGGTTTCGATGAAAGTTCCACGTCGACATCGAGAAATAATAGCTTGGCGCCTATGAACTCTTTATATGTCAATGCTTTATTTGGTAAGGCACCGTTAGTGCCTTTGGCGACTCAAAACAATAACAACACAATTTTGGATTACAATATGGCTTTTGCTACGCATATTAATAAAGGTTTGTTCCCCAACGTTGCTGCCCAAAAGTTTTATAATCCTTTGCAAATCGATACGAATGCTATGAAACACTCAGCCTTAATGTACGGTTTAAGTCAACGTTACTTCGATACAAATCGCTCGGTAATAGATCTATATAATCAGAATCATGCCGAAAAGAATGCAATGGCGGGAAATTACTTCATTAGCCCGAAACAGCCAACAAATGCAGAAGTGCTTAACCGTCCCGAATTGTCGGCTTCACCGTTAACCTCTGCCGGTTTCAGTTGTGGTATATGTGAACGCAATGATTTCCGTACGGAATCTGAGGTACACTCACACCGCAAAATAGTTCATAATTTGAAAACTGGCGTCAGTTTACGTTGCGCTTATTGTTCGGGTAATTTTAAATCACGCAGTGAACTAGAACATCATATGAAAACCTGCCACAATTCCACTGGTAAACATAAATGTTTGATATGCGATGAAATCTTCCCTTCACCAGCCATATTGGCGGAGCATAAGTTGCAGCATTCAAAAGTGGGACAATCGGGCAAATGTTCGCATTGTTCGAAAGTTTTGCCTGACGTAGCAGCGTTTAAGTCTCATCTACCCGAGCACAACAACGAAGGTCAAATGCCAGTACAGTGCATATGCTGCCGGCAAACTTTGCATTCCGAGTTCGAGGTTGGATTGCACGCCAAATTTCATGTGAAGTCTTCACAAGTAACCGAGAGTGTTTGCGCTTTATGTTTAGAACCAATAGCAGCTGGATCTCCGACGGAGGCTAAAGTTTGCGAGAAATGTTGCCGTAAGCATAACCTGAACAATAAATTCAAGCAACCGGAAAACTTTGAACGACCGTCCATACATCGGCAATATGTTGAAAATCGCTGCAACCTATGCAAAATGATTTTGCCTCATGTCCAAAAATTGCAAGAACACCTCGTGGAGCATACGTTCGCTGGTTGCGAAGATCGTGGGTTTAATTGTTATATTTGTTCCGCGGTGTTTACGGTACCGAGCGGTTTACTTAATCACATGAACGATCACGGTTTGAATGCTCGTCCGTACGATTGCAATTTATGTCCAGAGAAATTCTATTTTCGAGCCGAACTTGATCATCATCTCATTGATCATGATGCACGTGATAAAGGTCCCATAAAAAATGAACTGGATCGACCTCTAATAAATGAAAATAAAAACCTTGCGACAAAAGGCTGTACAACGGCCAAGTCAGAAGTTCCTTTAAAGCTTACAGAGGTTAAACAAGAGATTATAGATGCCGAGGAAGCAATCAATACAAACGAAGATGATGAATATATTGAGGTAGAGAAAATCAATGAAACAACAACACTGGAGGTAAGAAAGCAAGAGAAGTCAGATTCGGAAAATTCCTCGGATGAGAAGTAA
Protein Sequence: MALLERSDEATVGEKQKISSPMLRNDCHLNKVFFSFYKLSLRSRQRALNGYIMSLSLQSHAEHLPFKCEYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLAAGGNPQTLSYSPRSTGSASSNGSLHKRRYNLAIEPENSPSRLDFPKRVRCSSSNFLKCTFCTKSDFVNMEQLNSHIQRMHEKELINTMPQASTTTPLPADGSGFQLACEYCTMKFPNIPTMFQHMRSTHIDRLASPNSYFEHLNRLAASGTFSPRLLTNPPLRSSASTEENSIKEETQTNSPKTVENSAKTNEDEPTDLSQNNRHQHSPPAALQDPPSTASEKPGVYLCNQCNAGLPNFDSFRTHLQTHLAQSLNLVCHHCGLVLRELSDYERHVISHFLITNSEYNCPSNCQKTFTKSDDLQKHLIDQHTVTVYKCGICSDIFDTKVALQVHFACTHAEEIKIFRCSACMDVFRNENDFGVHVKTRHQAVNPNPTPINNLQCMFCTAVCSSDLEMQFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHGERVAVAQKDGFDESSTSTSRNNSLAPMNSLYVNALFGKAPLVPLATQNNNNTILDYNMAFATHINKGLFPNVAAQKFYNPLQIDTNAMKHSALMYGLSQRYFDTNRSVIDLYNQNHAEKNAMAGNYFISPKQPTNAEVLNRPELSASPLTSAGFSCGICERNDFRTESEVHSHRKIVHNLKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCSKVLPDVAAFKSHLPEHNNEGQMPVQCICCRQTLHSEFEVGLHAKFHVKSSQVTESVCALCLEPIAAGSPTEAKVCEKCCRKHNLNNKFKQPENFERPSIHRQYVENRCNLCKMILPHVQKLQEHLVEHTFAGCEDRGFNCYICSAVFTVPSGLLNHMNDHGLNARPYDCNLCPEKFYFRAELDHHLIDHDARDKGPIKNELDRPLINENKNLATKGCTTAKSEVPLKLTEVKQEIIDAEEAINTNEDDEYIEVEKINETTTLEVRKQEKSDSENSSDEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00749156; iTF_00747711; iTF_00749890; iTF_00750667; iTF_00748420;
90% Identity: iTF_00749156; iTF_00749890; iTF_00748420; iTF_00750667;
80% Identity: -