Gaus011349.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Glossina austeni
Gene Symbol
sip1
Assembly
GCA_000688735.1
Location
Scaffold188:553540-556862[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-94 1.8e-90 303.4 16.0 1 275 411 681 411 681 0.99
2 2 0.052 5e+02 0.2 0.1 155 190 691 725 685 735 0.69

Sequence Information

Coding Sequence
ATGTCGGATAACGAATATGAACGTTTTGAAATAACTGATTATGATATCGACAATGAATTTAATCCGAACAGACCAAGAAAGAAACTTAGCAAACAGCAGCAAATATATGGTATTTGGGCCGACGATAGTGACAATGAAGAGGTAGAGGAAGCAAGCGGTCGGCGAGGCCGTAAAGGTCGTTCAGGTTTTGGTGGCGTTTCGAAAGCCAAGCGGTCAAAAGATTACACTGCACCGGTAAATTTTGTGGCTGGTGGAATACAACAATCAGGAAAGAAAAAGCCGGTAGATGATGGCAAAGATGATCATCCTATTACCGATGAAGAAGATGATCTAGAAGCTAGGCCGGGTTTCGGTAGCGGTGCTGCAATTATTGATAATGATGATTCTCCGGATTCTAGTAATGAGTCTACCGAAGAAGAGCAGATTAAAAATAGCCAGACAAAGCCAATGGCTAAACCAAGCTATCGGAGTAATCTCAAAGTCGGGGCTTGGGAACAGCATACTCGTGGTATCGGAGCCAAGCTACTGTTACAAATGGGTTACGAACCGGGTAAAGGTTTAGGTAAAGATCTACAAGGTATTGCTCAACCAGTGGAAGCTCATGTGCGCAAAGGACGTGGCGCAATAGGAGCATATGGACCAGAAACCTCTGCTTCAGTAACCGGAAAAGCACAACTCGACGAAGATATAAAAGATGCTAAGGAGTTCAAAGAAAAACTAAATAAGTGGAAGAAGACGGACAGCCGTAGCGAGAAGAGTTCGAAAAAATATTACTATAAGACTGTGGAAGAGGTTCTGGAGAAGGGTAAAAGATCCAATTTTATGTTGGGCGATAAAATTAGCAAAAAGTTGGGAAATGTTCCAGTAATCGATATGACTGGTCCTGAGAAGCGCGTTTTAAGTGGATATCATGCTTTAAGCCAATCTAAAGTTCAAGAAGAAGATCTTTATGATCTTACTCATGACGCTCaaaaaaaaaTTACCAATATTTCGGGAGGTTTTGCTCTTCCAGAATTAATGCACAATTTGTCCTTAATAGTCAATATGTGTGAACAAGATATTATAACTTTGGACTCAGCCGAGCATAGCGCATCTGAGCGCTTTACCGCTTTGGAACAGGAAAGAAAGCAATTGCTGGAAATTGTAAGATTGGAAGAAGACCATATAGACACTTTAGAAAAAGCTTTAGCTTTGGTTAATGAGCTAACCTCCAGCGAAGATAAATTAACTTTGCAACGTGCCGAGCAAATATTTATAGAATTACAGCAAAAGTACGCAGCCGAATATAAGGAATTCTGTTTGGACGATTTAGCTGCGGGTGTAATAGCCCCGTTAGTTAAAGATGCTTTAAAAGATTGGCAGCCTTTAGAAAATCCCACTTTACATGTGGATCTAATTAGAAAATGGCGAATGATTTTGGAGACTTTTGCTGATCCTCAGTCTTTGGCGCGTACTAATATATTTGATCCGTATTCCTCGTTGATCTGGGCTGGAGTGATACCATCATTTCGGGCTTGTGCTGAACATTGGCAGCCAAAAAATCACCAAATAATGGCTGCTTTATTAGATTGTTGGGCTCCATTGTTTCCTTCCTGGATCTTAGACTCCGTGTTGGAGCAGTTAGTTCTGCCGCGTTTGCATGTTGGCGTAAAATCTTGGGATCCTTTGACTGACACCGTACCCATACATATATGGATTTTACCATGGAATTCTATATTAGGACATAAAATGGAGGAGTTTATCTATCCGACTATACGCGAGAAGTTAGGTAATGCTTTGCAAGCTTGGATTCCGCAAGATCGTTCAGCTCGAGCTATGCTCACACCTTGGAAGGGGGCTTTTGATTCGCAGGAAATGGAAGtttttttAATGCAACACATAATACCAAAGCTGCTAATGGTTTTAAACGATTTCATTATCAATCCTCTGCAACAAGATTTGGAACCCTGGAGTCAAGTGTGGGAATGGCATGAATTAATACCAACTGCGCAAATGGCTCGCATGCTAGATAAACACTTCTTTCCTAAATGGATGCAAGTTTTAGTTCTGTGGTTGAATCAATCTCCCGATTATGTAGAAATATCCAATTGGTATACGGGCTGGAAAAGTATGCTCTCGGAAGATTTGTTAAATGAGCCCAACATCAAAGAACATTTACGTAGAGCTTTGGAAATTATGCATCGTGTTACAGATTCTGTTATAAAAGATGGACCAAGTGCAGCGCCACCGCCTCCTCAACCCCCACCAACGCCGCAAGCTTTAGTTGATTTGCAAATGTCTGGCGCTCCTGCAGTCGAATTTAAGGAACTGGTCTCCCGCAAATGTTCAGAGCGTGGGATCATTTTCGCACCCCTGCCCGGCAGACGGGAACTTGGCAAACAAATCTATCGGGTCGGTAAACTCTACTGCTATATCGATCGTAATGTTTGCATGCTAAGTGATAGCAGTTTTAAAAATTGGACTCCAACGCTTCTGCAGCCCATGCTAGAGCGTGCGGTAACGGGAAATTTATAA
Protein Sequence
MSDNEYERFEITDYDIDNEFNPNRPRKKLSKQQQIYGIWADDSDNEEVEEASGRRGRKGRSGFGGVSKAKRSKDYTAPVNFVAGGIQQSGKKKPVDDGKDDHPITDEEDDLEARPGFGSGAAIIDNDDSPDSSNESTEEEQIKNSQTKPMAKPSYRSNLKVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGIAQPVEAHVRKGRGAIGAYGPETSASVTGKAQLDEDIKDAKEFKEKLNKWKKTDSRSEKSSKKYYYKTVEEVLEKGKRSNFMLGDKISKKLGNVPVIDMTGPEKRVLSGYHALSQSKVQEEDLYDLTHDAQKKITNISGGFALPELMHNLSLIVNMCEQDIITLDSAEHSASERFTALEQERKQLLEIVRLEEDHIDTLEKALALVNELTSSEDKLTLQRAEQIFIELQQKYAAEYKEFCLDDLAAGVIAPLVKDALKDWQPLENPTLHVDLIRKWRMILETFADPQSLARTNIFDPYSSLIWAGVIPSFRACAEHWQPKNHQIMAALLDCWAPLFPSWILDSVLEQLVLPRLHVGVKSWDPLTDTVPIHIWILPWNSILGHKMEEFIYPTIREKLGNALQAWIPQDRSARAMLTPWKGAFDSQEMEVFLMQHIIPKLLMVLNDFIINPLQQDLEPWSQVWEWHELIPTAQMARMLDKHFFPKWMQVLVLWLNQSPDYVEISNWYTGWKSMLSEDLLNEPNIKEHLRRALEIMHRVTDSVIKDGPSAAPPPPQPPPTPQALVDLQMSGAPAVEFKELVSRKCSERGIIFAPLPGRRELGKQIYRVGKLYCYIDRNVCMLSDSSFKNWTPTLLQPMLERAVTGNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00749696; iTF_00747468;
90% Identity
iTF_00749696; iTF_00747468;
80% Identity
-