Basic Information

Insect: Glossina brevipalpis
Gene Symbol: sip1_1
Assembly: GCA_000671755.1
Location: Scaffold71:132358-135619[-]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 4.3e-94 3.1e-90 302.2 14.1 1 275 412 682 412 682 0.99

2 2 0.023 1.6e+02 1.4 0.1 155 190 692 726 686 737 0.70

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	4.3e-94	3.1e-90	302.2	14.1	1	275	412	682	412	682	0.99
2	2	0.023	1.6e+02	1.4	0.1	155	190	692	726	686	737	0.70

Sequence Information

Coding Sequence: ATGTCGGACGACGAATATGAGCGTTTTGAAATAACTGATTATGATATGGAAAATGAATTCAACCCAAATAGACCAAGGAAAAAACTTAGTAAACATCAGCAAATATATGGTATTTGGGCTGACGATAGTGATAATGAGAATTTGGATGAACCAAGCAGTCGTCGAGGCCGCAAAGCTCGTTCAGGCTTCGGCGGTGTCTCGAAATCTAAACGGTCTAAAGATTACACTGCACCAGTAAATTTTGTTGCTGGTGGCATACAAGGAAAGAAAAAGTCTGACTCAATAGATGATAGCAAAGATAATCATCCAATTACCGATGAAGAAGACGATCTAGAAGCCAGACCGGGCTTTGGTAGTGCTGCAGCAATTGTCGATAATGATGATTCGACAAATTCCAGTAATGAGTCTACCGAAGGAGAGCAAGATAAAAATAATCAGACGAAACCATTGACTCAGCCAACTTATCGAGGTAATCTCAAAGTTGGGGCCTGGGAACAGCACACTCGGGGCATAGGAGCCAAGTTATTATTACAAATGGGCTATGAACCGGGTAAAGGTCTAGGCAAAGATCTGCAAGGTATATCTCAACCAGTGGAGGCTCATGTGCGCAAAGGACGAGGTGCAATAGGAGCATATGGCCCAGAAACATCCGCTTCAATTACTGGGCAAACACAACAAATCGATGCAGATGTAAGAGAAACAAAGGAATTCAAAGAGAAACTAAACAAGTGGAAAAAGACAGACAGCCGTAGTGaaaaaaaTTCGAAAAGATATTATTATAAGACTGTGGAGGAAGTGCTGGAAAAGGGTAAAAGATCCAATTTTATATTGGGCGACAAAATTAGCAAAAAGTTGGGAAACGTTCCAGTAATCGATATGACTGGTCCTGAAAAACGTGTTTTAAGTGGATATCATGCCTTAAGTCAATCCAAAGTTCAGGAAGAAGATCTTTATGATCTTACACATGATAGTCAGAAGAAAGCTACCACTACTTCAGGAGGCTTTAGTCTTCCAGAACTAATGCATAATCTGTCTTTAATAGTCAATATGTGTGAACAAGATATTATAGCTTTGGATTCGGCTGAGCATAGCGCTTCTGAGCGTTTTGCCGCTTTAGAACAAGAGAGGAAGCAATTGCTGGAAATTGTAAAACTGGAAGAAAACCATATTGGCACTTTAGAAAAAGCTTTAGCTTTGGTTAACGAGCTAACCTCCAATGAAGATAAATTAACTTTGCAACGTGCTGAGCAAATATTTATAGAATTACAGCAAAAATATGCAGCTGAATATAAGGAATTCTGTTTGGACGATTTAGCTGCTGGTGTAATAGCTCCGTTAGTTAAAGACGCTTTAAAAGATTGGAAGCCTTTAGAGGCTCCTACTTTGCATGTAGATATAATTAGGAAATGGCGATCCATTCTAGAAACTTTTGCGGATCCTCAATCTTTGACCCGTACCAACATATTTGATCCGTATTCTTCACTGATTTGGGCAGGTGTAATACCATCATTTCGGGCTTGTGCTGAACACTGGCAGCCAAAAAATCATCAAATTATGGCTGCTTTATTGGATTGTTGGGCTCCACTGTTTCCTTCTTTGATCTTAGATTCCGTGCTGGAGCAATTAGTTTTGCCGCGTTTACATTCTGGTGTTAAATCTTGGGATCCATTGACGGACACGGTACCTATACACATATGGATTTTACCATGGAATTCGATATTGGGTCACAAAATGGAAGAGTTTATTTATCCGACTATACGCGAGAAATTAGGGAATGCTTTACAAGCTTGGATTCCACAAGATCGTTCGGCTCGAGCTATGCTCACGCCTTGGAAAGGAGCTTTTGACGCACAGGAAATGGAAGtttttttAATGCAACATATAATACCAAAATTGCTAATGGTTTTGAACGATTTCATCATCAATCCACTGCAACAAGATTTGGAACCTTGGAATCAAGTATGGGAATGGCATGAGTTAATACCGACTGTACAAATGGCTCGCATGCTAGACAAGCACTTCTTTCCCAAATGGATGCAGGTCCTAGTTTTGTGGTTGAATCAATCCCCTGATTATGTAGAAATAACCCGTTGGTATACGGGTTGGAAAAGTATGCTCTCGAAAGAGTTGCTAAACGAACCAAATATCAAAGAGCATTTACGTAGAGCTTTGGAAATTATGCATCGTGTTACGGATTCTGTTATAAAAGAAAGCCCAAGTTCAGCTCCACCGCCTCCTCAACCTCCTCCTACACCGCAAGCGTTAGTTGATTTGCAAATGTCGGGCGCACCTGTAGTCGAATTTAAAGAACTGGTTTCTCGTAAATGTTCGGAGCGTGGCATAATTTTCGCTCCGCTTCCCGGTAGACGAGAACTTGGTAAACAGATCTATCGTATAGGTAAACTCTACTGTTACATCGATCGTAATGTTTGCATGCTAAGTGATAACAGCTTTAAAAATTGGACTCCCACGCCTTTACAACCCATGTTAGAGCGTGCGATAACGGGAAATTTATAA
Protein Sequence: MSDDEYERFEITDYDMENEFNPNRPRKKLSKHQQIYGIWADDSDNENLDEPSSRRGRKARSGFGGVSKSKRSKDYTAPVNFVAGGIQGKKKSDSIDDSKDNHPITDEEDDLEARPGFGSAAAIVDNDDSTNSSNESTEGEQDKNNQTKPLTQPTYRGNLKVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVEAHVRKGRGAIGAYGPETSASITGQTQQIDADVRETKEFKEKLNKWKKTDSRSEKNSKRYYYKTVEEVLEKGKRSNFILGDKISKKLGNVPVIDMTGPEKRVLSGYHALSQSKVQEEDLYDLTHDSQKKATTTSGGFSLPELMHNLSLIVNMCEQDIIALDSAEHSASERFAALEQERKQLLEIVKLEENHIGTLEKALALVNELTSNEDKLTLQRAEQIFIELQQKYAAEYKEFCLDDLAAGVIAPLVKDALKDWKPLEAPTLHVDIIRKWRSILETFADPQSLTRTNIFDPYSSLIWAGVIPSFRACAEHWQPKNHQIMAALLDCWAPLFPSLILDSVLEQLVLPRLHSGVKSWDPLTDTVPIHIWILPWNSILGHKMEEFIYPTIREKLGNALQAWIPQDRSARAMLTPWKGAFDAQEMEVFLMQHIIPKLLMVLNDFIINPLQQDLEPWNQVWEWHELIPTVQMARMLDKHFFPKWMQVLVLWLNQSPDYVEITRWYTGWKSMLSKELLNEPNIKEHLRRALEIMHRVTDSVIKESPSSAPPPPQPPPTPQALVDLQMSGAPVVEFKELVSRKCSERGIIFAPLPGRRELGKQIYRIGKLYCYIDRNVCMLSDNSFKNWTPTPLQPMLERAITGNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00746709;
90% Identity: iTF_00746709;
80% Identity: -