Gpal015404.1
Basic Information
- Insect
- Glossina pallidipes
- Gene Symbol
- sip1
- Assembly
- GCA_000688715.1
- Location
- Scaffold44:264708-268407[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-93 1.1e-89 300.8 15.4 1 275 458 728 458 728 0.99 2 2 0.055 5.2e+02 0.1 0.1 155 190 738 772 732 782 0.69
Sequence Information
- Coding Sequence
- atgaaattgtatatgaactgccctattgttattttttataaatttgttctctgtgtttacgttgatttGATAGTTGATAAATGGAAGTTTTTCGTGAATCGAATCCCAAATAATAAATTTATATTAATTGCTGATTTAAATATGTCGGATAATGAATATGAACGTTTTGAAATAACTGATTACGATATCGATAATGAATTTAATCCGAATAGACCAAGAAAGAAACTTAGCAAACAGCAGCAAATATATGGTATTTGGGCCGACGATAGTGACAATGAGGACGTAGAAGAAGCAAGCGGTCGGCGAGGGCGTAAAGGTCGTACAGGTTTTGGTGGCGTTTCGAAAGCGAAGCGGTCGAAAGATTATACTGCACCGGTAAATTTTGTGGCTGGTGGAATACAACAATCTGGAAAGAAAAAGCCGGTAGATGATGACAAAGATGATCATCCTATTACTGATGAAGAAGATGATCTAGAAGCTAGGCCGGGTTTCGGGAGCGGTGCTGCAATTATTGATAATGATGATTCTCCGGATTCTAGTAATGAGTCCACCGAAGAAGAGCAAATTAAAAATAGCCAGACAAAGCCAATGGCTAAACCAAGCTATCGGAGTAATCTCAAAGTCGGCGCCTGGGAACAGCATACTCGTGGTATTGGAGCCAAGCTATTGTTACAAATGGGTTACGAACCAGGGAAAGGTCTAGGTAAAGATCTTCAAGGTATTTCTCAACCGGTGGAAGCCCACGTGCGCAAAGGACGTGGTGCAATAGGAGCATATGGTCCAGAAACCTCTGCTTCAGTAACCGGAAAAGCACAACTCGATGAAGATATAAGAGATGCTAAAGAGTTTAAAGAAAAACTAAATAAGTGGAAGAAGACGGACAGCCGTAGCGAGAAAAATTCGAAAAAATATTACTATAAGACTGTGGAAGAGGTTCTGGAGAAGGGTAAAAGATCAAACTTTATGTTGGGCGATAAAATTAGCAAAAAGTTGGGAAATGTTCCAGTAATCGATATGACTGGTCCCGAGAAGCGCGTTTTAAGTGGATATCACGCTTTAAGCCAATCTAAAGTTCAAGAAGAAGATCTTTATGATCTTACTCATGACGCTCAGaaaaaaaCTACCAATATTTCGGGAGGTTTTGCTCTTCCAGAATTAATGCACAATTTGTCTTTAATAGTCAATATGTGTGAACAAGATATTATAACTTTGGACTCAGCCGAGCATAGCGCATCTGAGCGCTTTACCGCTTTAGAACAGGAGAGAAAGCAATTGCTGGAAATTGTAAGATTGGAAGAAGACCATATAGACACTTTGGAAAAAGCTTTAGCTTTGGTTAATGAGCTAACCTCCAGCGAAGATAAATTAACTTTGCAACGTGCCGAGCAAATATTTATAGAATTACAGCAAAGGTATGCAGCCGAATATAAGGAATTCTGTTTGGACGATTTAGCTGCGGGTGTAATAGCCCCGTTAGTTAAAGATGCTTTAAAAGATTGGCAACCTCTAGAAAATCCCACTTTGCATGTGGATCTAATTAGAAAATGGCGAGTTATTTTGGAGACTTTTGCTGATCCTCAGTCTTTGGCGCGCACTAATATATTTGATCCGTATTCCTCGTTGATCTGGGCTGGTGTGATACCTTCATTTCGGGCTTGTGCTGAACATTGGCAGCCAAAAAATCATCAAATAATGGCTGCATTATTGGATTGTTGGGCTCCACTGTTTCCTTCCTGGATCTTAGACTCCGTATTGGAGCAGTTAGTCCTGCCGCGTTTGCATGTTGGTGTAAAATCTTGGGATCCTTTGACTGATACAGTACCCATACATATATGGATTTTACCATGGAATTCTATATTAGGACATAAAATGGAAGAATTTATCTATCCGACTATACGCGAGAAATTAGGTAATGCTTTGCAAGCTTGGATTCCGCAAGATCGTTCAGCCCGAGCTATGCTCACACCTTGGAAAGGAGCTTTTGATTCGCAGGAAATGGAAGtttttttAATGCAACACATAATACCAAAGCTGCTAATGGTTTTAAACGATTTCATTATCAATCCTCTGCAACAAGATTTGGAACCCTGGAGTCAAGTGTGGGAATGGCATGAATTAATACCAACTGCGCAAATGGCTCGCATGCTAGATAAACACTTCTTTCCTAAATGGATGCAAGTTCTAGTTCTGTGGTTGAATCAATCTCCCGATTATGTAGAAATATCCAATTGGTATACGGGCTGGAAAAGTATGCTCTCGGAAGATTTGTTAAATGAGCCCAACATCAAAGAACATCTACGTAGAGCTTTGGAAATTATGCATCGTGTTACAGATTCCGTTATAAAAGATGGACCAAGTGCAGCGCCACCGCCTCCTCAACCCCCACCAACGCCGCAAGCTTTAGTTGATTTGCAAATGTCTGGCGCTCCTGTAGTCGAATTTAAGGAACTTGTTTCCCGTAAATGTTCAGAGCGTGGTATCATTTTCGCTCCCCTGCCCGGCAGACGAGAACTTGGCAAACAAATCTATCGGGTCGGTAAACTCTACTGCTATATCGATCGTAATGTTTGCATGCTAAGTGATAGCAGTTTTAAAAATTGGACTCCAACGCTCCTGCAGCCCATGTTAGAGCGGGCGGTAACGGGAAATTTATAA
- Protein Sequence
- MKLYMNCPIVIFYKFVLCVYVDLIVDKWKFFVNRIPNNKFILIADLNMSDNEYERFEITDYDIDNEFNPNRPRKKLSKQQQIYGIWADDSDNEDVEEASGRRGRKGRTGFGGVSKAKRSKDYTAPVNFVAGGIQQSGKKKPVDDDKDDHPITDEEDDLEARPGFGSGAAIIDNDDSPDSSNESTEEEQIKNSQTKPMAKPSYRSNLKVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVEAHVRKGRGAIGAYGPETSASVTGKAQLDEDIRDAKEFKEKLNKWKKTDSRSEKNSKKYYYKTVEEVLEKGKRSNFMLGDKISKKLGNVPVIDMTGPEKRVLSGYHALSQSKVQEEDLYDLTHDAQKKTTNISGGFALPELMHNLSLIVNMCEQDIITLDSAEHSASERFTALEQERKQLLEIVRLEEDHIDTLEKALALVNELTSSEDKLTLQRAEQIFIELQQRYAAEYKEFCLDDLAAGVIAPLVKDALKDWQPLENPTLHVDLIRKWRVILETFADPQSLARTNIFDPYSSLIWAGVIPSFRACAEHWQPKNHQIMAALLDCWAPLFPSWILDSVLEQLVLPRLHVGVKSWDPLTDTVPIHIWILPWNSILGHKMEEFIYPTIREKLGNALQAWIPQDRSARAMLTPWKGAFDSQEMEVFLMQHIIPKLLMVLNDFIINPLQQDLEPWSQVWEWHELIPTAQMARMLDKHFFPKWMQVLVLWLNQSPDYVEISNWYTGWKSMLSEDLLNEPNIKEHLRRALEIMHRVTDSVIKDGPSAAPPPPQPPPTPQALVDLQMSGAPVVEFKELVSRKCSERGIIFAPLPGRRELGKQIYRVGKLYCYIDRNVCMLSDSSFKNWTPTLLQPMLERAVTGNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00746709;
- 90% Identity
- iTF_00746709;
- 80% Identity
- -