Gale023981.1
Basic Information
- Insect
- Glaucopsyche alexis
- Gene Symbol
- pnr
- Assembly
- GCA_905404095.1
- Location
- FR990054.1:17014338-17026721[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.7e-18 4.4e-14 52.9 3.0 1 35 333 366 333 367 0.98
Sequence Information
- Coding Sequence
- ATGAAGAATCTCGAGAGCAGGCAGGCGGCGGTCGCGCTGCTCCAGATAAAGAACTACGACCCGACCAAGTACGCCGTCAAGCAGGACGACACTCCGCACATTATGTTCAACAGCGTGCCGAGCCTGCCGCCGTCCGACCGAGCGCGGGAGGTTATGCACTGCAACGCCGTCATCGACATAATAAGTAAGGCCGTGGCGGTCGCGCGAGAGAACGACTCCCATTTTCCGCCTAACTACGCGGCGGACAAAGATGTGACCTACGTGCAGGAGTACGAGGAGCAGTACTACGCGCCGCAGGTCACGAGCCCAGGAAGCGCGGACGACCATGACAACAAGGAAATAGATCTGTCGCTCTACTCCACGAAAACGGACAacgagcggagcgagcgagccgAGCGCGAGACGTACTCGCGGACGGCACCCAAGGCGGCGAGCTTCGTGGACGAGTACAAGCAGCATCTGTTCGGGAAGAACAAGACGAAGAAGGAGAACTCCACCGTGTACGAGGAATGTAGCCGGAGCAGCAGCGGCTCCGACCCCGACAGACTGCAGATGGATATCTCGGAGATGTCGCAGGATGACCCAGAGGAGACCCAGTCAGTGCCTTCAACGCAGTCGTCGCCCAAGCCGCCTCACGAAAATGAAAACGACAAAGATTCTCTATGGCAGGCACTCCATAAACAAAACGGTCGCGGCGGCGAGGCGACGCAGCTGCTGCGGCGACTGATCAACAGCAAGCACCTGGGCATGACGGTGTCGCCGCTgcgcgcgcccgcgccgccgccgccatcTAACGGACTGATGCCGAACGGCGAGTGGCCTCACGCGCGTGCGGCGTTGGCGGGCGCGAACGCGGGGGGTACGGCGCGCAGGAAACAGAGCTGCCCGGCACGCGCGCAGCCCACGGAACCCGCGTGGCCCGTGCCCGATACTGAGAACGCGGCGGGTGGAGCGCCGGCCGCAGCGAGCCCGCGCGGGCCGCGGGTCGAACTGTCATGCAGCAACTGCGGGACGCACACCACCACAATATGGCGGCGCGACGCGCGCGGCGAGATGGTGTGCAACGCGTGCGGCCTGTACTACAAGCTGCACGGCGTCGCGCGGCCCTCCGCCATGCGCCGCGACACCATACacacgcgccgccgccgcccgcgacACGACGCCAAGCACTCGCGCTCCAAGTCGCGACGCTccggcggcgggggcggcggcggcggcgggggtgGGTGCGGCGCGACCGAAGTAGTGGAAGAGGCCGGCGCGGAGGAGGCCGTGCTGGCGGCTCTGCGCCGGCAGCTGCAGCCCAACCTGCTCGCCGCGCTGCACGCGTACGCGCCGCGCGACCAACCAGCGCAGGTAGGGCGCAGTATGCCCGAATACGACGACGCGCCGTTAAACCTAGTGGCGAGCCACGTCGCCGCCGAAGAGACGCACTGA
- Protein Sequence
- MKNLESRQAAVALLQIKNYDPTKYAVKQDDTPHIMFNSVPSLPPSDRAREVMHCNAVIDIISKAVAVARENDSHFPPNYAADKDVTYVQEYEEQYYAPQVTSPGSADDHDNKEIDLSLYSTKTDNERSERAERETYSRTAPKAASFVDEYKQHLFGKNKTKKENSTVYEECSRSSSGSDPDRLQMDISEMSQDDPEETQSVPSTQSSPKPPHENENDKDSLWQALHKQNGRGGEATQLLRRLINSKHLGMTVSPLRAPAPPPPSNGLMPNGEWPHARAALAGANAGGTARRKQSCPARAQPTEPAWPVPDTENAAGGAPAAASPRGPRVELSCSNCGTHTTTIWRRDARGEMVCNACGLYYKLHGVARPSAMRRDTIHTRRRRPRHDAKHSRSKSRRSGGGGGGGGGGGCGATEVVEEAGAEEAVLAALRRQLQPNLLAALHAYAPRDQPAQVGRSMPEYDDAPLNLVASHVAAEETH*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01179175; iTF_00404359; iTF_00934405; iTF_00164924; iTF_00289294; iTF_00406382; iTF_00935358; iTF_01248759; iTF_01218008;
- 90% Identity
- iTF_01179175; iTF_00289294;
- 80% Identity
- -