Ctho000954.1
Basic Information
- Insect
- Cyclargus thomasi
- Gene Symbol
- pnr
- Assembly
- GCA_026546445.1
- Location
- JAOTAV010008293.1:6815-13850[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-17 2.6e-14 52.8 3.0 1 35 355 388 355 389 0.98
Sequence Information
- Coding Sequence
- ATGTCATCGGCGCGCCCCTTATTGGAGGTACTGAGCATCACCGCGGCGAAGCTGGAGGAGATAATCAAACCGCTGGGCGACTACGAGCGGTACGAGGTCGGCTCCCCGGACTCCACCGAGGAAAAGAATCTCGAAAGCCGGCAGGCGGCCGTCGCTCTGCTCCAGATCAAGAACTACGACCCCAGCAAGTATACGAAGCCGGTGGAGCCGCACATCACCTTCAACAGCGTGCCGAGCCTGCCGCCCGCGGACCGCGCGCGTGAGGTTATGCACTGCAACGCCGTCATCGACATTATAAGTAAGGCTGTGGCGGTCGCGCGCGAGAACGATCTTCCGGCCGAATATGAGGAAGCGCGCCAGGAGTACGAGGAACAGTACTACGCGCCGCAGGTCACGAGCCCCGCCAGCGATGACAACAAGGAAATCGACCTGTCGTTATACTCGAAAGCGGAAAGCGAGCCGAGCGACCGACCGGAGAGAGAATACGCCGCGCCCCGCCCGGCCAGCTTCGCGGACGAGTACAAGCACCACGTTTTCGGCAAGGGCAAGAGGAAGGAAGGCGCGTACGAGGAGTGCAGCCAGAGCAGCAGCGGCTCCGACCCCGACAGGCTGCAGATGGATATATCGGAGATGTCTCAGGACGATCCGGAAGAGACTCAGTCTGTGCCTTCTACGCAGTCGTCGCCGAAGCCGCCGCACGAGAACGAAACCGACAAGGAATCTCTATGGCAGGCTCTACATAAACAAAACGGTCGCGGCGGTGAAGCGACGCAGCTGCTGCGGCGGCTGATCAACAGCAAGCACCTCGGTATGACGGTGTCGCCGCTGCGGGCGCCCGCGCCACCGCCGCCGCCCAACGGACTTATGCCGAACGGAGAGTGGACGCACACGCGCGCGGCGCTGGCGGGCGCGAACGCAGGCGGCACGGCGCGTAGGAAACAGAGCTGCCCGGCGCGCGCGCAGCCCGCCGCCGAGCCCGCCTGGCCCATACCTGATACCGAGAACACCGCTGGCGGCGCAGGTGCAGCGGCTAGCCCGCGCGGGCCGCGGGTGGAACTGTCATGCAGCAACTGCGGCACGCACACAACGACGATATGGCGTCGCGACGCTCGCGGCGAGATGGTGTGCAACGCGTGCGGGTTATACTACAAGCTGCACGGCGTCGCGCGACCGACCGCGATGCGGCGCGACACTATACATACGCGCCGCCGCAGACCGAGACACGACGCTAAGCACTCTCGATCCAAGTCGCGTCGCTCCGGAGGTACTGGTGGCGGGGGCGGGGCCCCTTGCGAAGCGGAGGAGGGCGGCGCGGAGGAGGCTGTGCTAGCGGCGCTACGTCGACAGTTGCAGCCCAACCTACTAGCCGCACTACACGCGTACGCGCCGCGCGACCAACCCGCACAGGTAGGGCGCAGTATGCCAGAATATGACGATGCACCGTTAAACTTGGTGGCGAGTCACGTCGCCGCTGAGGAGACGCACTGA
- Protein Sequence
- MSSARPLLEVLSITAAKLEEIIKPLGDYERYEVGSPDSTEEKNLESRQAAVALLQIKNYDPSKYTKPVEPHITFNSVPSLPPADRAREVMHCNAVIDIISKAVAVARENDLPAEYEEARQEYEEQYYAPQVTSPASDDNKEIDLSLYSKAESEPSDRPEREYAAPRPASFADEYKHHVFGKGKRKEGAYEECSQSSSGSDPDRLQMDISEMSQDDPEETQSVPSTQSSPKPPHENETDKESLWQALHKQNGRGGEATQLLRRLINSKHLGMTVSPLRAPAPPPPPNGLMPNGEWTHTRAALAGANAGGTARRKQSCPARAQPAAEPAWPIPDTENTAGGAGAAASPRGPRVELSCSNCGTHTTTIWRRDARGEMVCNACGLYYKLHGVARPTAMRRDTIHTRRRRPRHDAKHSRSKSRRSGGTGGGGGAPCEAEEGGAEEAVLAALRRQLQPNLLAALHAYAPRDQPAQVGRSMPEYDDAPLNLVASHVAAEETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00745295;
- 90% Identity
- iTF_00404359; iTF_00934405; iTF_01248759; iTF_01218008; iTF_00935358;
- 80% Identity
- -