Basic Information

Gene Symbol
pnr_2
Assembly
GCA_963565745.1
Location
OY751443.1:14359274-14375282[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.5e-17 4e-13 49.9 3.9 1 34 378 410 378 412 0.98

Sequence Information

Coding Sequence
ATGCGTGCTTATCGGGAGGTCCTGAGTATAACGGCGGCGAAGCTGGAGGAGATTATCAAGCCGCTGAACGATATCGAATACGAGGAGAAGCACAGGTACGCGGAAGTCGGCTCGCCGGACTCCACCGAGGAGATGAAGAATCTGGAGAGCAGGCAGGCGGCAGTCGCGTTGCTCCAGATCAAGAACTACGACCCGACCAAGTACGCCGTCAAGCAGGACGACACTCCGCACATTATGTTCAACAGCATGCCAAGCCTGCCGCCGTCCGACCGAGCGCGGGAGGTTATGCACTGCAACGCCGTCATCGACATAATAAGTAAGGCCGTGGCGGTCGCGCGAGAGACCGACCCCCATTTTCCGCCTAACTACACGGCGGACAAAGATGTGACCTACTCGCAGGAGTACGAGGAGCAGTACTACGCGCCGCATGTCACGAGTCCAGGAAGCGCGGACGACCATGACAACAAGGAAATAGATCTCTCGCTTTACTCCACAAAAACGGACAACGAGCAGAGCGAGCGAGCCGAGCGCGAGACATACTCGCGGACGGCACCCAAGGCGGCGAGTTTCGCGGACGAGTACAAGCAGCATGTGTTCGGGAAGGACAAGACGAAGAAGGAGAACTCCACCGTGTACGAGGAATGTAGCCGGAGCAGCAGCGGCTCCGACCCTGACAGACTGCAGATGGATATTTCGGAGATGTCGCAGGATGACCCAGAGGAGACCCAGTCAGTGCCTTCAACGCAGTCGTCGCCCAAGCCGCCTCACGAAAATGAAAACGACAAAGATTCTCTATGGCAGGCACTCCATAAACAAAACGGTCGCGGCGGCGAGGCGACGCAGCTGCTCCGGCGACTGATCAACAGCAAACATCTGGGCATGACGGTGTCGCCGCTGcgcgcgcccgcgccgccgccgccacctAACGGACTGATGCCGAACGGCGAGTGGACTCACGCGCGTGCGGCGTTAGCGGGCGCGAACGCAGGGGGCACGGCGCGCAGGAAACAGAGCTGCCCGGCGCGTGCGCAACCCGCGGCCGAACCAGCGTGGCCCGTGCCCGATACTGAGAACGCAGCGGGTGGAGTGGGGGCCGCAGCGAGCCCGCGCGGGCCGCGGGTCGAACTGTCGTGCAGCAACTGCGGCACGCACACCACCACAATATGGCGGCGCGACACCCGCGGCGAGATGGTGTGCAACGCGTGCGGCCTGTACTACAAGCTGCACGGCATCGCGCGGCCCACCGCCATGCGCCGCGACACCATACACACGCGGCGCCGCCGCCCGCGACACGACGCCAAGCACTCGCGATCCAAGTCGCGACGtaccggcggcggcggcggcggcggcggcggaggcGGGTGCGGCGCGACTGAGGCGGTGGAGGAGGGCGGCGCGGAGGAGGCCGTGCTGGCGGCGCTGCGCCGGCAATTGCAGCCCAACCTGCTCGCCGCGCTGCACGCGTACGCTCCGCGTGACCAACCAGCGCAGGTAGGGCGCAGTATGCCCGAATACGACGACGCGCCGTTAAACCTAGTGGCGAGCCACGTCGCCGCCGAAGAGACGCACTGA
Protein Sequence
MRAYREVLSITAAKLEEIIKPLNDIEYEEKHRYAEVGSPDSTEEMKNLESRQAAVALLQIKNYDPTKYAVKQDDTPHIMFNSMPSLPPSDRAREVMHCNAVIDIISKAVAVARETDPHFPPNYTADKDVTYSQEYEEQYYAPHVTSPGSADDHDNKEIDLSLYSTKTDNEQSERAERETYSRTAPKAASFADEYKQHVFGKDKTKKENSTVYEECSRSSSGSDPDRLQMDISEMSQDDPEETQSVPSTQSSPKPPHENENDKDSLWQALHKQNGRGGEATQLLRRLINSKHLGMTVSPLRAPAPPPPPNGLMPNGEWTHARAALAGANAGGTARRKQSCPARAQPAAEPAWPVPDTENAAGGVGAAASPRGPRVELSCSNCGTHTTTIWRRDTRGEMVCNACGLYYKLHGIARPTAMRRDTIHTRRRRPRHDAKHSRSKSRRTGGGGGGGGGGGCGATEAVEEGGAEEAVLAALRRQLQPNLLAALHAYAPRDQPAQVGRSMPEYDDAPLNLVASHVAAEETH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00745295;
90% Identity
iTF_00745295;
80% Identity
-