Basic Information

Gene Symbol
pnr
Assembly
GCA_905147365.1
Location
LR990268.1:11428896-11436821[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.4e-18 3.3e-14 52.6 3.0 1 35 378 411 378 412 0.98

Sequence Information

Coding Sequence
ATGTCAACGGCGGCGCGCCCCTCATTGGTCGCTCCTATCTCGGAATCGGCGCCTGACGTTTTTCTTTGCTCGCAGGAGGTCCTGAGCATCACCGCGGCGAAGCTGGAGGAGATAATCAAGCCGCTGGGCGACGAGTACGACCGGCACGAGTACGAGGTCGGGTCCCCGGACTCCACCGAGGAAAAGAACCTCGAGAGCCGGCAGGCGGCCGTCGCGCTGCTGCAGATCAAGAACTACGACCCCACGAAGTACGCGAAGCCCGCCGAGCCGCACATCACGTTCAACAGCGTGCCGACCCTGCCGCCCGCGGACCGCGCGCGCGAGGTTATGCACTGCAACGCCGTCATCGACATAATAAGTAAGGCGGTGGCGGTCGCGCGCGAGACCGACCGCCTTCCGCCTGGCTACGAGGAAGCGCCGCAGGAGTACGACGATCAGTACTACGCGCCGCAGGTCACGAGCCCACACAGCGACCACGACAACAAGGAAATCGATTTATCCCTGTACTCGAAGGCGGACAGCGAGCCGAGCGAGCGAGCGGAGCGCGAGTACGCGGCGCCGCGGCCGGCGAGCTTCGCGGACGAGTACAAGCAGCACGTGTTCGGGAAGGGCAAGAGGAAGGACGGCGCGGGGTACGAGGAGTGCAGCCAGAGCAGCAGCGGCTCCGACCCCGACAGGCTGCAGATGGATATATCCGAGATCTCGCAGGATGACCCAGAGGAAACTCAGTCTGTGCCTTCAACGCAGTCTTCGCCTAAACCGCCGCACGAGAACGAAAACGACAAGGAATCTCTATGGCAGGCTCTCCATAAACAAAACGGTCGCGGCGGCGAAGCAACGCAACTGCTGCGGCGGCTAATCAACAGCAAACATCTTGGTATGACGGTGTCGCCGCTGCGAGCGCCCGCGCCTCCGCCGCCGCCCAACGGACTTATGCCGAACGGCGATTGGACGCACACGCGCGCGGCGCTTGCGAGCGCGAACGCCGGCGGCACGGCGCGTAGGAAACAGAGCTGCCCGGCGCGCGCGCAGCCAGCCACCGAGCCCGCCTGGCCGCCACCTGATACTGAGAACGCCGCTGGCGGCGCAGGCGCAGCAGCAAGCCCGCGCGGGCCGCGGGTGGAACTTTCATGCAGCAACTGCGGCACGCACACGACAACAATATGGCGTCGCGACGCTCGCGGCGAGATGGTGTGCAACGCGTGCGGGTTGTACTACAAGCTGCACGGCGTCGCGCGACCCACCGCGATGCGTCGCGACACTATACACACGCGTCGCCGCAGACCACGACACGACGCAAAGCACTCGCGTTCCAAGTCACGTCGCTCCGGCGGTAACGCTGGAGGCGGGGCCACATGCGAGGCGGAGGAGGGCGGCGCGGAGGAGGCGGTGCTAGCGGCCCTACGCAGACAGCTGCAACCCAATCTGCTTGCCGCACTACATGCGTACGCGCCACGAGACCAGCCCGCACAGTCGCGTCGCTCCGGCAGTACCGCTGGAGGCGGGGCCACATGCGAGGCGGAGGAGGCGGTGCTAGCGGCCCTACGCAGACAGCTGCAACCCAACCTGCTAGCCGCACTACATGCGTACGCGCCGCGCGACCAGCCCGCACAAGGGCTACAGGTAGGGCGCAGTATGCCAGAATATGACGACGCGCCGCTAAACCTCGTGGCGAGTCACGTCGCCGCAGAAGAGACGCACTGA
Protein Sequence
MSTAARPSLVAPISESAPDVFLCSQEVLSITAAKLEEIIKPLGDEYDRHEYEVGSPDSTEEKNLESRQAAVALLQIKNYDPTKYAKPAEPHITFNSVPTLPPADRAREVMHCNAVIDIISKAVAVARETDRLPPGYEEAPQEYDDQYYAPQVTSPHSDHDNKEIDLSLYSKADSEPSERAEREYAAPRPASFADEYKQHVFGKGKRKDGAGYEECSQSSSGSDPDRLQMDISEISQDDPEETQSVPSTQSSPKPPHENENDKESLWQALHKQNGRGGEATQLLRRLINSKHLGMTVSPLRAPAPPPPPNGLMPNGDWTHTRAALASANAGGTARRKQSCPARAQPATEPAWPPPDTENAAGGAGAAASPRGPRVELSCSNCGTHTTTIWRRDARGEMVCNACGLYYKLHGVARPTAMRRDTIHTRRRRPRHDAKHSRSKSRRSGGNAGGGATCEAEEGGAEEAVLAALRRQLQPNLLAALHAYAPRDQPAQSRRSGSTAGGGATCEAEEAVLAALRRQLQPNLLAALHAYAPRDQPAQGLQVGRSMPEYDDAPLNLVASHVAAEETH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00745295;
90% Identity
-
80% Identity
-