Gpyr003722.1
Basic Information
- Insect
- Gandaritis pyraliata
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_947859175.1
- Location
- OX401853.1:1177931-1187258[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-72 6.3e-68 229.5 15.5 1 275 120 379 120 400 0.85 2 2 0.27 5.7e+03 -3.5 9.8 124 166 420 466 407 475 0.58
Sequence Information
- Coding Sequence
- ATGGGACATAATTCAGTAATGGCTACACCTGATAATAGTGACGAGGAGAGTGGAGATGCCTTTACTGACGGTGACTTCGGGGACTCTGATGATGAAACCGTTCTGGAACGCGATGACAACAAACCCTCTAGCATCCCTGTCAATGAAACTATCAATGAAGATGTTCAAAAAAAGCTAACCAACGGCAATTCTAGTAATGGATATAAGGAACCTCTCGACGAAGTAAAAGTTAATGGACGTGAACAAGAAATAAGTAATTTAGAAAATTGCAGTGACATAGCACCAGATTTAAGACGGGATTCCCACGGTGATCAAAATCCTTCGATTGTGGGAATTATCGGAGATCAGCACAGCCATGCAGAACAACGTCTGGCTGCGCGGCGCGCGGCGCGGGCCGAGGCCAGAGAGATCCGCATGAGAGAGCTGGAGAGACAGCAACGGGAGCAAGAGGACCATGCTGACAAGGCGTATGACATGTACGCTGAGACAGTTGGCAGACGAGGTCCCCGACTGGCATCGCTCAGTCCGGCCGCAGCGCTCTCGCCGCGACGGTGTTCAGAAGATTCTGCGGATGACACCTTTAGCATCAAAGACTTGAGGCATGAGCTGAAGGAAGTAGAAGAGAAGTTCCGCAAGGCGATGATTCTGAACGCGCAGCTCGACAACGACAAGGCCTCGCTCGGCTACCAGCTGGAACTGCTCAAGGACAGGATTGATGAGTTGCAGGAGGAGTACGCACAGTTACAGCGCGAGCACCGCGAGAAGTGCTCCGTGCACGAGCGGCTGAAGCGCGAGCACGTGTGCTTGGAGCGCGAGGTGTGCGCCGCGCGGGATGCGGTGCGCGCGCGCGACGCCGCCGCCGCCGCCGCCGGCTTCGTGTTCGCGGAGGCGCCGCCCGGCGCCAGCGCGCCAGGCTTCGGCGCCGTGCCGCCGCTCGCGCTGCTCTCGCATCACGCCGACATGATGCTCGGCGACGGGGACGCCACGCTGGACGTGCGGTTGCAAAACCTGGTGACCTCGAAGCAGTCCCTGGAGTCGGAAGTGCGCAAGCTGAAGCTCACGCTGAACGAAGAACGCGCCGCGAGACAAAATGGCGTCGCGAACCATCACGACGAACATTATGAGAACGAATTGGAGTGTGTGCGCAAGGCGGCGGCGGAGGCAAAGGGCCGCGCGGCGCGCGCCGAGGCGGAGGCCGCGCTGCACGCCGCCGCGTGCGCGCGCCTCGAGGCGCAGCTGCAGCGGCTCCGCGCGCGGCAGGACGACCACGACGACCTGGAGGAACAACTCAAGCAGGACCGCAGGAAGCTGCAGCGAGAGGCTCGAGAGGCTCTGAACCGCGTCGAAGAGTTGGAGACGGAGAACAGCCACCTGACCAAGAGACTCGACAAGTTGAAGAACGCCAAATCCGCACTGCTCAAGGACCTGTGA
- Protein Sequence
- MGHNSVMATPDNSDEESGDAFTDGDFGDSDDETVLERDDNKPSSIPVNETINEDVQKKLTNGNSSNGYKEPLDEVKVNGREQEISNLENCSDIAPDLRRDSHGDQNPSIVGIIGDQHSHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGPRLASLSPAAALSPRRCSEDSADDTFSIKDLRHELKEVEEKFRKAMILNAQLDNDKASLGYQLELLKDRIDELQEEYAQLQREHREKCSVHERLKREHVCLEREVCAARDAVRARDAAAAAAGFVFAEAPPGASAPGFGAVPPLALLSHHADMMLGDGDATLDVRLQNLVTSKQSLESEVRKLKLTLNEERAARQNGVANHHDEHYENELECVRKAAAEAKGRAARAEAEAALHAAACARLEAQLQRLRARQDDHDDLEEQLKQDRRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00909728;
- 90% Identity
- iTF_00632772;
- 80% Identity
- -